Re: [ccp4bb] Validation reports for all X-ray structures in the PDB

2014-04-26 Thread Eric Williams
Any chance validation reports will ever be made for obsoleted entries? Eric On Wed, Apr 16, 2014 at 1:01 PM, Gerard DVD Kleywegt wrote: > Hi all, > > You may not have noticed, but 19 March 2014 was VR Day - the day that new > style wwPDB validation reports for all X-ray structures were made publ

Re: [ccp4bb] anomalous signal

2014-04-26 Thread Phil Evans
Was there a reason that you turned off the scaling in Aimless ("onlymerge")? If the data have come from Mosflm, this is definitely wrong - the result is that (among other things) you have negative CCanom values which is unusual to say the least Just run it with the default options, that's usual

Re: [ccp4bb] Summary of feedback on diffuse streaks in diffraction pattern

2014-04-26 Thread B.Lohkamp
... and there will be (shameless self-advertising): Ponnusamy et al. 2014 Acta D accepted You may also want to make pseudo-precession photographs using LABELIT. This will give you a better indication on the characteristics and directionality of the disorder. Bernhard Thanks to all who res

Re: [ccp4bb] anomalous signal

2014-04-26 Thread Tim Gruene
Dear Faisal, the lack of the CCanom line in the shelxc output suggests that your data are already merged, and my guess is you processed your data with HKL2000 - all other integration programs I am aware of do not merge the data at such an early stage giving you access to the CCanom Eleanor mention

Re: [ccp4bb] anomalous signal

2014-04-26 Thread Eleanor Dodson
Look at the aimless plot of CCanom . That is the best indicator I think and very sensitive when you have such high redundancy Eleanor On 25 Apr 2014, at 22:13, Jim Pflugrath wrote: > should be above 0.80 > > There seems to be plenty of signal there with all values above 1.02. We have > solv