[ccp4bb] Calculate real-space R-factor/corr coeff for ligand

2011-10-03 Thread Brigitte Ziervogel
Hi, I am trying to calculate real-space R-factors and correlation coefficients for an array of different ligand conformations to find out which fits best in experimental density. So far, I have been trying to use Overlapmap in CCP4 6.1.2 to do this, by correlating maps by residue and

Re: [ccp4bb] Calculate real-space R-factor/corr coeff for ligand

2011-10-04 Thread Brigitte Ziervogel
Thanks Ian, I'll keep posting :) Brigitte Original message Date: Tue, 4 Oct 2011 21:19:40 +0100 From: Ian Tickle ianj...@gmail.com Subject: Re: [ccp4bb] Calculate real-space R-factor/corr coeff for ligand To: bkziervo...@uchicago.edu Cc: Adam Ralph adam.ra...@maths.nuim.ie, CCP4

[ccp4bb] Overlapmap

2011-10-04 Thread Brigitte Ziervogel
Hi, I am using the program Overlapmap to calculate real-space R-factors and correlation coefficients in order to find ligand conformations that fit best within the density. I'm confused by the Overlapmap output, which includes Fobs and Fcalc values that are used to calculate the R-factors and