Hi Jeroen,
Indeed, I did write to the original poster about this, asking him if he really meant Gerson Cohen's align program in his post, in which case I would be happy to send it to him. I still have the linux version but, as others have pointed out, there are new
kids on the block that do the job. In fact, I myself don't use align these days, nor am I sure that the version I have will handle the v3 pdb's properly.
Cheers,
Boaz
Boaz Shaanan, Ph.D.
Dept. of Life Sciences
Ben-Gurion University of the Negev
Beer-Sheva 84105
Israel
E-mail: bshaa...@bgu.ac.il
Phone: 972-8-647-2220Skype: boaz.shaanan
Fax: 972-8-647-2992 or 972-8-646-1710
From: CCP4 bulletin board [CCP4BB@JISCMAIL.AC.UK] on behalf of mesters [mest...@biochem.uni-luebeck.de]
Sent: Monday, November 11, 2013 11:19 AM
To: בעז שאנן
Subject: Spam:Re: [ccp4bb] Align linux version
Back in 2003 I wrote an email to Gerson Cohen concerning ALIGN and he told me to contact Boaz Shaanan.
Boaz was so kind to send me his linuxified fortran code of the align program (reading of a prealigment could not be implemented) that is still working on our linux machines! We use it a lot, great program.
Ask Boaz (but not all at once please :-)
)!!
- J. -
Am 10.11.13 22:09, schrieb Tim Gruene:
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA1
Dear Mintu Chandra,
Do you mean by 'has linux compiled align version', that 'align' is a
program you use for the alignment? I wonder because I have not heard
of it.
If you would be happy with any alignment software, you could use coot
(graphical) or lsqkab (command line). Both programs areavailable once
you installed ccp4.
Regards,
Tim Gruene
--
Dr. Jeroen R. Mesters
Gruppenleiter Strukturelle Neurobiologie und Kristallogenese
Institut für Biochemie
Universität zu Lübeck
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