Re: [ccp4bb] Data reprocessing

2024-01-27 Thread Jon Cooper
I have one or two in my garage ;-0 Best wishes, Jon Cooper. jon.b.coo...@protonmail.com Sent from Proton Mail mobile Original Message On 27 Jan 2024, 19:46, Randy John Read wrote: > Hi, The current policy of the PDB is that you can deposit a re-refinement of > a structure

Re: [ccp4bb] Data reprocessing

2024-01-27 Thread Randy John Read
Hi, The current policy of the PDB is that you can deposit a re-refinement of a structure deposited by someone else only if you publish a new paper about it, so that there is a citation associated with the structure. Of course, echoing Eleanor, if you find an issue with someone else’s structure

Re: [ccp4bb] Data reprocessing

2024-01-26 Thread Matthew Merski
I second Eleanor's suggestions. In fact I would hope the PDB made re-depisitions known to the original authors. I had an incident recently where someone (I believe possibly a student) had used one of my structures for MR but then did the deposition as a re-refinement (because they used it as MR

Re: [ccp4bb] Data reprocessing

2024-01-26 Thread Eleanor Dodson
Did you make the original deposition ? If so the pdb accepts re-depositions... If it was done by someone else I guess the courteous thing is to notify them and maybe talk to the pdb- redo team? Cheers Eleanor On Sat, 27 Jan 2024 at 01:53, Lucas Souza wrote: > Dear all, > > After auditing and

[ccp4bb] Data reprocessing

2024-01-26 Thread Lucas Souza
Dear all, After auditing and reprocessing a deposited structure with clear processing mistakes (missing/wrong residues and ligands with evident density) prior to some analysis that are going to be published, what should be done? Re-deposit the structure with a "reprocess" flag? Reopen the PDB