Re: [ccp4bb] Lysine methylation for proteins containing disulfide bonds?

2010-04-30 Thread Nathaniel Clark
I just tried that protocol, and had essentially all of my protein crashed out. Any tips on optimizing the methylation reaction to reduce precipitation? Perhaps reducing the formaldehyde or dimethylaminoborane, shortening the incubation times, etc.? Thanks, Nat On Wed, Apr 14, 2010 at 6:00 PM,

Re: [ccp4bb] Lysine methylation for proteins containing disulfide bonds?

2010-04-30 Thread James Holton
Maybe you could try a modification that does not require reduction? Like sulfo-NHS-acetate (will turn primary amines into amides). There are hundreds of amine-reactive protein modification reagents out there. Most of them listed at piercenet.com. Also, try doing the reaction at different

Re: [ccp4bb] Lysine methylation for proteins containing disulfide bonds?

2010-04-14 Thread Engin Ozkan
I was surprised to get a few messages asking for our protocol for reductive methylation of proteins for crystallization. We employ almost exactly the protocol published by Walter et al, Structure, 2006. This is a Ways and Means article that made us realize how easy it was to do this regularly

[ccp4bb] Lysine methylation for proteins containing disulfide bonds?

2010-04-13 Thread Oliver Clarke
Hi all, I'm currently trying to crystallise a two domain protein which contains several structurally important disulfides. We have a high resolution structure of one domain (~1.4 A resolution), which reveals quite a few solvent-exposed lysines, some of which are involved in

Re: [ccp4bb] Lysine methylation for proteins containing disulfide bonds?

2010-04-13 Thread Engin Özkan
Dear Oliver, In our lab, reductive methylation using dimethylaminoborane is regularly performed, and nearly everything we work on have native disulfides. Among five or six reactions I've performed on molecules with disulfides, I have not had a case where solubility or stability was affected.