Re: [ccp4bb] ipmosflm not connecting to XQuartz on Mac.
Hi Francis It works okay for me on OSX Mavericks when I use the “official” Mosflm build rather than the CCP4 one (choose the “X11” option when downloading). I don’t think the CCP4 build of Mosflm includes the X11 GUI (since we’ve been trying for many years to wean people off it…). I’m assuming when you say you get a hang that it reads the commands but the X11 GUI doesn’t appear (but I could be wrong). It’s probably worth saying here that if people have features that they really do miss from the old GUI that they would like to see in iMosflm, then please let us know - if there’s enough demand we will do our best to oblige (particularly if it’s a straightforward addition to the code…). -- ** note change of address ** Dr Harry Powell, MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge, CB2 0QH Chairman of European Crystallographic Association SIG9 (Crystallographic Computing) On 15 Apr 2014, at 21:54, Francis Reyes francis.re...@colorado.edu wrote: Hi all, Anyone having issues getting ipmosflm to connect to XQuartz? I'm getting a hang when running go just when I expect the old GUI to load. Thanks, F - Francis E. Reyes PhD 215 UCB University of Colorado at Boulder --
Re: [ccp4bb] ipmosflm not connecting to XQuartz on Mac.
I had a similar problem with CCP4 generally after a recent computer upgrade. Re-installing xquartz worked for me, because some components had seemingly become deleted. HTH Mark On 15 Apr 2014, at 21:54, Francis Reyes francis.re...@colorado.edu wrote: Hi all, Anyone having issues getting ipmosflm to connect to XQuartz? I'm getting a hang when running go just when I expect the old GUI to load. Thanks, F - Francis E. Reyes PhD 215 UCB University of Colorado at Boulder --
[ccp4bb] ipmosflm not connecting to XQuartz on Mac.
Hi all, Anyone having issues getting ipmosflm to connect to XQuartz? I'm getting a hang when running go just when I expect the old GUI to load. Thanks, F - Francis E. Reyes PhD 215 UCB University of Colorado at Boulder --
Re: [ccp4bb] ipmosflm
Hi Eric You need to make sure g77 is properly installed on your system. For any FC system, if you install g77 from an RPM (e.g. see your FC install DVD/CD/website) you should get this file in the right place. If you don't want the whole compiler there, you should be able to get round this on an FC system by just installing the libg2c.so file explicitly, perhaps from an RPM. It may be that the correct file is on your system, but either called something else (similar, e.g. libg2c.so.0) and not linked correctly to libg2c.so, or it isn't in your LD_LIBRARY_PATH; on my systems it's in the directory /usr/lib (on others it's found in /usr/local/lib). I've put a copy on the Mosflm v 7.0.1 pre-built site (I haven't put a link on the page for it, but you can get it by following this - http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ver701/pre-built/suse-libg2c.so Personally, I really hate shared objects and have tried (oh, how I've tried!) to eliminate them from Mosflm distributions, but they seem to sneak in when I'm not looking... Hi, I try to install the latest version of ipmosflm and the small display version on my laptop (fedora 7). I got the following error message when I try to run it: $./mosflm_linux_suse_SD mosflm_linux_suse_SD: error while loading shared libraries: libg2c.so.0: cannot open shared object file: No such file or directory It might not related to the program. However, please advise. Thx. Eric Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH
Re: [ccp4bb] ipmosflm
FYI: I am using ipmosflm/imosflm on Fedora Core 7. My notes for FC7 install say to make sure that you have the following installed: compat-libstdc++-33 compat-libstdc++-296 compat-gcc-34 compat-gcc-34-c++ compat-gcc-34-g77 You can use yum install compat-libstdc++-33 to install each of the libraries above. -Anand -Original Message- From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Harry Powell Sent: Sunday, September 02, 2007 12:43 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] ipmosflm Hi Eric You need to make sure g77 is properly installed on your system. For any FC system, if you install g77 from an RPM (e.g. see your FC install DVD/CD/website) you should get this file in the right place. If you don't want the whole compiler there, you should be able to get round this on an FC system by just installing the libg2c.so file explicitly, perhaps from an RPM. It may be that the correct file is on your system, but either called something else (similar, e.g. libg2c.so.0) and not linked correctly to libg2c.so, or it isn't in your LD_LIBRARY_PATH; on my systems it's in the directory /usr/lib (on others it's found in /usr/local/lib). I've put a copy on the Mosflm v 7.0.1 pre-built site (I haven't put a link on the page for it, but you can get it by following this - http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ver701/pre-built/suse-libg2c.so Personally, I really hate shared objects and have tried (oh, how I've tried!) to eliminate them from Mosflm distributions, but they seem to sneak in when I'm not looking... Hi, I try to install the latest version of ipmosflm and the small display version on my laptop (fedora 7). I got the following error message when I try to run it: $./mosflm_linux_suse_SD mosflm_linux_suse_SD: error while loading shared libraries: libg2c.so.0: cannot open shared object file: No such file or directory It might not related to the program. However, please advise. Thx. Eric Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH
Re: [ccp4bb] ipmosflm
Thanks for all the responses. I choose the simplest way of all your suggestions by installing the library compat-gcc-34-g77 using yum on Fedora 7. Problem solved! imosflm is running. Cheers, Eric On 9/2/07, Anand Kolatkar [EMAIL PROTECTED] wrote: FYI: I am using ipmosflm/imosflm on Fedora Core 7. My notes for FC7 install say to make sure that you have the following installed: compat-libstdc++-33 compat-libstdc++-296 compat-gcc-34 compat-gcc-34-c++ compat-gcc-34-g77 You can use yum install compat-libstdc++-33 to install each of the libraries above. -Anand -Original Message- From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Harry Powell Sent: Sunday, September 02, 2007 12:43 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] ipmosflm Hi Eric You need to make sure g77 is properly installed on your system. For any FC system, if you install g77 from an RPM (e.g. see your FC install DVD/CD/website) you should get this file in the right place. If you don't want the whole compiler there, you should be able to get round this on an FC system by just installing the libg2c.so file explicitly, perhaps from an RPM. It may be that the correct file is on your system, but either called something else (similar, e.g. libg2c.so.0) and not linked correctly to libg2c.so, or it isn't in your LD_LIBRARY_PATH; on my systems it's in the directory /usr/lib (on others it's found in /usr/local/lib). I've put a copy on the Mosflm v 7.0.1 pre-built site (I haven't put a link on the page for it, but you can get it by following this - http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ver701/pre-built/suse-libg2c.so Personally, I really hate shared objects and have tried (oh, how I've tried!) to eliminate them from Mosflm distributions, but they seem to sneak in when I'm not looking... Hi, I try to install the latest version of ipmosflm and the small display version on my laptop (fedora 7). I got the following error message when I try to run it: $./mosflm_linux_suse_SD mosflm_linux_suse_SD: error while loading shared libraries: libg2c.so.0: cannot open shared object file: No such file or directory It might not related to the program. However, please advise. Thx. Eric Harry -- Dr Harry Powell, MRC Laboratory of Molecular Biology, MRC Centre, Hills Road, Cambridge, CB2 2QH
[ccp4bb] ipmosflm
Hi, I try to install the latest version of ipmosflm and the small display version on my laptop (fedora 7). I got the following error message when I try to run it: $./mosflm_linux_suse_SD mosflm_linux_suse_SD: error while loading shared libraries: libg2c.so.0: cannot open shared object file: No such file or directory It might not related to the program. However, please advise. Thx. Eric
[ccp4bb] ipmosflm centos4.4 mouse enlarge doesn't work
Hi, I just installed centos4.4 and the latest version of CCP4-6.0.2. I used the auto install and the runnable executables went just fine. Ipmosflm opens up just fine and can find spot, index, and refine, but I can't use the mouse to enlarge an area, which is especially needed when you have crappy data and the first indexing puts the spots slightly off and you need to adjust them. Any ideas besides switching to an older version of either centos or CCP4? Best Regards, Paul Dr. Paul Kraft Structural Biology Research Associate Dept. Biochemistry and Molecular Biology Laboratory of Dr. Barry Rosen Wayne State University School of Medicine 540 E. Canfield St. Detroit MI 48201 USA Ph: 313-577-0618 (Lab) fx: 313-577 2765 email: [EMAIL PROTECTED] - Looking for earth-friendly autos? Browse Top Cars by Green Rating at Yahoo! Autos' Green Center.
