Re: [ccp4bb] Is the PDBe deposition server broken?

2023-10-13 Thread Deepak Deepak
Works fine on our side. Had some other issues with OneDep system yesterday, but for now works fine. On Fri, Oct 13, 2023 at 3:28 PM Jan Dohnalek wrote: > I get this when attempting to log into our current deposition session.Error: > 500 > > There was a technical error. > > Something has gone

[ccp4bb] suggestions on refinement of a protein-ligand complex

2022-09-13 Thread Deepak Deepak
Dear all, Greetings from Munich. I hope everything is well with you. I am writing to take input on a problem related to the structure solution of a protein-ligand complex. I have crystallized a protein (7.6kDa) with a ligand (5.2kDa). The crystal diffracted to *2.71 Angstron*, and the data were

[ccp4bb] Problem in generating restraint file for 5.2kDa ligand

2022-11-09 Thread Deepak Deepak
Dear CCP4 users, I am working towards solving a protein-ligand complex structure. The ligand is 5.2 kDa (495 atoms) and made of 3 distinctive repetitive monomers. I have a PDB model for the ligand and also as smiles and mol2 format. I tried generating restraint files for this ligand using

[ccp4bb] Äktaxpress uninet connector : Off topic

2024-02-08 Thread Deepak Deepak
Dear All, Apologies for the off-topic post. We recently acquired some old Äktaxpress systems and learned that they require a specific USB to Uninet cable in order to connect to a PC. For now, we only find it on Cytiva for 2700 USD. Could you please guide me to some other seller that might have

[ccp4bb] ÄktaXpress to PC adapter : Off topic

2024-04-16 Thread Deepak Deepak
Dear CCP4 community, We recently acquired some ÄktaXpress systems from our neighboring lab, but unfortunately, we are missing the essential *adapter cable (Uninet-CAN)*. Does your lab have this Äktaxpress cable but don't need any more, we would greatly appreciate your assistance. As a point of