[ccp4bb] standard accessible area of residues

2007-07-16 Thread Hyunchul Kim
accessible area by AREAIMOL but that doesn't contain information for ratio or standard accessible area. Any comment are welcome. Thank you in advance, Best, Hyunchul Kim

[ccp4bb] accessible surface area of PISA at EBI

2007-07-17 Thread Hyunchul Kim
this happen? I believe that ASA should be bigger than 0.00, for instance, 100 angstrom square. Best, Hyunchul Kim Ph.D candidate Bioinformatics program Keio University, Japan

Re: [ccp4bb] resolution and solvent accessible surface area

2007-07-24 Thread Hyunchul Kim
Hello Miguel, Thank you for your reply. It's related to the total SASA of a protein structure but not that of per residue. However, it still give me a hint. :) Best, Hyunchul Kim On Tue, 2007-07-24 at 08:12 +0200, Miguel Ortiz-Lombardía wrote: Hello Hyunchul Kim, I found this paper very

[ccp4bb] ratio of solvent accessible surface area 1.0

2007-09-28 Thread Hyunchul Kim
on middle parts but not on N-/C- terminal residues. Have you ever experienced this problem? How did you solve this problem? Welcome any comments. Best, Hyunchul Kim