Re: [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms
Hi Alan, I have read those documentations, but I am not familiar with this kind stuff, and the problem is that I don't really know what kind of the Linux systems I am using. Here is the information for my iMac: Mac OS X Version 10.4.11 (Tiger), Fink installed. Could you tell me which documentation in the website you attached is useful for me? And another question is that is CellML DOM API enough to open and use the model file that I downloaded from CellML? Thanks!! Best, Song On Mon, Oct 6, 2008 at 4:17 PM, Alan Garny [EMAIL PROTECTED] wrote: Dear Song, Did you have a look at the installation documentation? https://svn.physiomeproject.org/svn/physiome/CellML_DOM_API/trunk/docs/ Hopefully, you use one of the Linux systems for which we have some documentation. Regards, Alan *From:* [EMAIL PROTECTED] [mailto: [EMAIL PROTECTED] *On Behalf Of *song zhen *Sent:* 06 October 2008 20:58 *To:* cellml-discussion@cellml.org *Subject:* [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms Hi, I have a trouble in installation of this source file. when I ran ./configure command in x11, there was an error message stating that configure: error: GSL CBLAS library required. And actually, I have updated fink and also installed the gsl package already. What else should I do to fix this error? Thanks in advance! Song ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms
song zhen wrote: Hi Alan, I have read those documentations, but I am not familiar with this kind stuff, and the problem is that I don't really know what kind of the Linux systems I am using. Here is the information for my iMac: Mac OS X Version 10.4.11 (Tiger), Fink installed. Could you tell me which documentation in the website you attached is useful for me? And another question is that is CellML DOM API enough to open and use the model file that I downloaded from CellML? Thanks!! Hi Song, The CellML DOM API is a programmatic interface, and is the thing to use if you want to write a program for processing CellML models. If you are looking for a program with a graphical user interface which can be used to edit CellML models and run simulations etc..., try PCEnv, which makes use of the CellML API but exposes it through a user interface. Although PCEnv builds on Mac OS X, there are a number of usability issues at present, so I would recommend downloading a Linux snapshot and running the Linux version in a virtual machine. We are looking to improve OS X support in future. Best wishes, Andrew Best, Song On Mon, Oct 6, 2008 at 4:17 PM, Alan Garny [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] wrote: Dear Song, Did you have a look at the installation documentation? https://svn.physiomeproject.org/svn/physiome/CellML_DOM_API/trunk/docs/ Hopefully, you use one of the Linux systems for which we have some documentation. Regards, Alan *From:* [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] mailto:[EMAIL PROTECTED]] *On Behalf Of *song zhen *Sent:* 06 October 2008 20:58 *To:* cellml-discussion@cellml.org mailto:cellml-discussion@cellml.org *Subject:* [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms Hi, I have a trouble in installation of this source file. when I ran ./configure command in x11, there was an error message stating that configure: error: GSL CBLAS library required. And actually, I have updated fink and also installed the gsl package already. What else should I do to fix this error? Thanks in advance! Song ___ cellml-discussion mailing list cellml-discussion@cellml.org mailto:cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms
thanks a lot!! On Tue, Oct 7, 2008 at 4:58 PM, Andrew Miller [EMAIL PROTECTED]wrote: song zhen wrote: Hi Alan, I have read those documentations, but I am not familiar with this kind stuff, and the problem is that I don't really know what kind of the Linux systems I am using. Here is the information for my iMac: Mac OS X Version 10.4.11 (Tiger), Fink installed. Could you tell me which documentation in the website you attached is useful for me? And another question is that is CellML DOM API enough to open and use the model file that I downloaded from CellML? Thanks!! Hi Song, The CellML DOM API is a programmatic interface, and is the thing to use if you want to write a program for processing CellML models. If you are looking for a program with a graphical user interface which can be used to edit CellML models and run simulations etc..., try PCEnv, which makes use of the CellML API but exposes it through a user interface. Although PCEnv builds on Mac OS X, there are a number of usability issues at present, so I would recommend downloading a Linux snapshot and running the Linux version in a virtual machine. We are looking to improve OS X support in future. Best wishes, Andrew Best, Song On Mon, Oct 6, 2008 at 4:17 PM, Alan Garny [EMAIL PROTECTED]mailto: [EMAIL PROTECTED] wrote: Dear Song, Did you have a look at the installation documentation? https://svn.physiomeproject.org/svn/physiome/CellML_DOM_API/trunk/docs/ Hopefully, you use one of the Linux systems for which we have some documentation. Regards, Alan *From:* [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] mailto:[EMAIL PROTECTED]] *On Behalf Of *song zhen *Sent:* 06 October 2008 20:58 *To:* cellml-discussion@cellml.org mailto:cellml-discussion@cellml.org *Subject:* [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms Hi, I have a trouble in installation of this source file. when I ran ./configure command in x11, there was an error message stating that configure: error: GSL CBLAS library required. And actually, I have updated fink and also installed the gsl package already. What else should I do to fix this error? Thanks in advance! Song ___ cellml-discussion mailing list cellml-discussion@cellml.org mailto:cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
Re: [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms
Hi everyone, I just downloaded PCEnv 0.4 source code tarball for Mac OS X. Could anyone tell me how to install it? I am new at CellML... On Tue, Oct 7, 2008 at 4:58 PM, Andrew Miller [EMAIL PROTECTED]wrote: song zhen wrote: Hi Alan, I have read those documentations, but I am not familiar with this kind stuff, and the problem is that I don't really know what kind of the Linux systems I am using. Here is the information for my iMac: Mac OS X Version 10.4.11 (Tiger), Fink installed. Could you tell me which documentation in the website you attached is useful for me? And another question is that is CellML DOM API enough to open and use the model file that I downloaded from CellML? Thanks!! Hi Song, The CellML DOM API is a programmatic interface, and is the thing to use if you want to write a program for processing CellML models. If you are looking for a program with a graphical user interface which can be used to edit CellML models and run simulations etc..., try PCEnv, which makes use of the CellML API but exposes it through a user interface. Although PCEnv builds on Mac OS X, there are a number of usability issues at present, so I would recommend downloading a Linux snapshot and running the Linux version in a virtual machine. We are looking to improve OS X support in future. Best wishes, Andrew Best, Song On Mon, Oct 6, 2008 at 4:17 PM, Alan Garny [EMAIL PROTECTED]mailto: [EMAIL PROTECTED] wrote: Dear Song, Did you have a look at the installation documentation? https://svn.physiomeproject.org/svn/physiome/CellML_DOM_API/trunk/docs/ Hopefully, you use one of the Linux systems for which we have some documentation. Regards, Alan *From:* [EMAIL PROTECTED] mailto:[EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] mailto:[EMAIL PROTECTED]] *On Behalf Of *song zhen *Sent:* 06 October 2008 20:58 *To:* cellml-discussion@cellml.org mailto:cellml-discussion@cellml.org *Subject:* [cellml-discussion] installation of CellML DOM API: Core implementation for all platforms Hi, I have a trouble in installation of this source file. when I ran ./configure command in x11, there was an error message stating that configure: error: GSL CBLAS library required. And actually, I have updated fink and also installed the gsl package already. What else should I do to fix this error? Thanks in advance! Song ___ cellml-discussion mailing list cellml-discussion@cellml.org mailto:cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
[cellml-discussion] Announcement of PCEnv 0.5rc1 (release candidate for PCEnv 0.5)
Hi all, The first release candidate for PCEnv version 0.5 has been released. Information about the released files is available at: http://www.cellml.org/downloads/pcenv/releases/0.5rc1 A release candidate will become a release one week from announcement on this list if there are no problems identified with it. Please report any bugs you find at https://tracker.physiomeproject.org/, or to this list, or directly to [EMAIL PROTECTED] Best regards, Justin Marsh. ___ cellml-discussion mailing list cellml-discussion@cellml.org http://www.cellml.org/mailman/listinfo/cellml-discussion
