Maxwell Neal wrote:
Hi all - I was wondering - is there a webservice that would allow me
to programmatically download all the cellml models in the cellml
repository? Many thank,
Hi Maxwell,
Thank you for your interest in the CellML Model Repository. While we currently
don't have a formalized web service, we do provide a list of IDs to the
workspaces (http://models.cellml.org/workspace) which can be found at
http://models.cellml.org/workspace/list_txt. Basically you can append the ids
listed with the path.
To acquire the models, we recommend the usage of a Mercurial client, which can
be acquired from http://mercurial.selenic.com/. You can then use some kind of
shell scripting to loop through that list and clone each workspace onto your
local machine.
This is an example shell script:
#!/bin/sh
WS_ROOT=https://models.cellml.org/workspace
LIST=list_txt
for WORKSPACE in `wget --no-check-certificate -q -O - $WS_ROOT/$LIST`; do
if [ -d $WORKSPACE ]; then
echo $WORKSPACE exists. Checking updates.
hg pull -R $WORKSPACE
hg up -R $WORKSPACE -C
else
echo $WORKSPACE does not exist. Cloning.
hg clone $WS_ROOT/$WORKSPACE
fi
done
Note this script will overwrite any local uncommitted changes.
Regards,
Tommy.
M
- Maxwell Neal
Post-doctoral researcher University of Washington mn...@uw.edu (206)
543-8769 -
On Jul 29, 2011, at 5:00 PM, cellml-discussion-requ...@cellml.org
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Today's Topics:
1. ABI CellML Meeting Minutes, 27th July, 2011 (Dougal Cowan)
--
Message: 1 Date: Fri, 29 Jul 2011 13:56:13 +1200 From: Dougal Cowan
Subject: [cellml-discussion] ABI CellML
Meeting Minutes, 27th July, 2011 To: CellML Discussion List
Message-ID:
<4e32133d.4080...@auckland.ac.nz> Content-Type: text/plain;
charset=ISO-8859-1; format=flowed
I have put the minutes from this week's meeting up at:
http://www.cellml.org/community/meeting/minutes/2011/07.27
Cheers, Dougal
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