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backend
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from d38bf4e [SYSTEMML-445] Removed batch_norm builtin functions
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Repository: systemml
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[SYSTEMML-540] Improved performance of prediction via Keras2DML
- Reduced the model loading time of VGG by 1.7x by supporting exchange of
float32 matrices.
- Eliminated an additional mlcontext execution for
Repository: systemml
Updated Branches:
refs/heads/master 1a58946a0 -> 7019f3bc8
[SYSTEMML-2505] Generate the DML for Caffe and Keras models
Here is a sample example:
```
from keras.applications.vgg16 import VGG16
keras_model = VGG16(weights="imagenet", pooling="max")
from systemml.mllearn
Repository: systemml
Updated Branches:
refs/heads/master c3fdbb4da -> bda61b600
[MINOR] Updated the Linear Regression demo notebook
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refs/heads/master 25a10f412 -> c3fdbb4da
http://git-wip-us.apache.org/repos/asf/systemml/blob/c3fdbb4d/src/main/java/org/apache/sysml/runtime/instructions/spark/utils/RDDConverterUtils.java
http://git-wip-us.apache.org/repos/asf/systemml/blob/c3fdbb4d/src/main/java/org/apache/sysml/runtime/instructions/spark/AppendGSPInstruction.java
--
diff --git
http://git-wip-us.apache.org/repos/asf/systemml/blob/c3fdbb4d/src/main/java/org/apache/sysml/runtime/controlprogram/parfor/RemoteDPParWorkerReducer.java
--
diff --git
[BUGFIX] Revert all the files of commit 95cbbd6
- This also contains a instruction parsing-related bugfix introduced by the
commit 25a10f4
- However, there is also NPE error from recent commits related to Spark
bcumoffk instruction. This error will be fixed in later commits as it is
http://git-wip-us.apache.org/repos/asf/systemml/blob/95cbbd65/src/main/java/org/apache/sysml/runtime/instructions/spark/CentralMomentSPInstruction.java
--
diff --git
[MINOR] Throw an exception if incorrect long-to-int conversion occurs
- Without this fix, an incorrect conversion is silently ignored. This is
propagated further down in the engine and thrown as a different error
such as "Invalid block dimensions" or an incorrect result is returned.
Project:
Repository: systemml
Updated Branches:
refs/heads/master bc6e941ce -> 95cbbd656
http://git-wip-us.apache.org/repos/asf/systemml/blob/95cbbd65/src/main/java/org/apache/sysml/runtime/instructions/spark/utils/RDDConverterUtils.java
http://git-wip-us.apache.org/repos/asf/systemml/blob/95cbbd65/src/main/java/org/apache/sysml/runtime/controlprogram/parfor/RemoteDPParWorkerReducer.java
--
diff --git
Repository: systemml
Updated Branches:
refs/heads/master 6ca9be1f5 -> 62647de61
[MINOR] Added an external UDF to split string
- Also, updated ListObject to specify the valuetype of the list. This takes
care of the "wrong value type warning".
Closes #844.
Project:
Repository: systemml
Updated Branches:
refs/heads/master 8606754ea -> beb1a1d19
[SYSTEMML-445] Support recomputation of activations to reduce the memory
footprint
- Added a configuration property sysml.gpu.recompute.activations to enable
recomputation of ReLU.
- This configuration is
Repository: systemml
Updated Branches:
refs/heads/master 912b47018 -> 8606754ea
[SYSTEMML-1325] Setting floating point precision in JMLC
- In current master, the configuration sysml.floating.point.precision is
ignored. This commit fixes that issue
Project:
Repository: systemml
Updated Branches:
refs/heads/master bf4ba16b9 -> 912b47018
[SYSTEMML-540] Improve the performance of LSTM forward on GPU
- This commit improves the performance of LSTM forward by reducing unnecessary
ping pongs between CPU-GPU due to left indexing.
- There is no
Repository: systemml
Updated Branches:
refs/heads/master cc7ec7625 -> bf4ba16b9
[SYSTEMML-1325] Fixes formatting issues and warnings. Fixes bug causing explain
to sometimes not be printed.
Closes #838.
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Commit:
Repository: systemml
Updated Branches:
refs/heads/master be2b3e220 -> cc7ec7625
[SYSTEMML-1325] Bugfix for GPU memory manager clear temporary memory. Fixes bug
in GPU cleanup with JMLC.
In GPUMemoryManager.clearTemporaryMemory() we deallocate pointers but do not
set the corresponding
Repository: systemml
Updated Branches:
refs/heads/master 3cbd9d5ab -> be2b3e220
[SYSTEMML-445] Extend shadow buffer for double precision
- This commit also prepares SystemML for very low precision.
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Commit:
Repository: systemml
Updated Branches:
refs/heads/master 0a957e4c9 -> 73e1e40d7
[MINOR] Bugfix in Large Dense Block
- Current master throws java.lang.ArrayIndexOutOfBoundsException when
counting number of non-zeroes
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Commit:
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Updated Branches:
refs/heads/master ef842da9c -> bd34292d4
http://git-wip-us.apache.org/repos/asf/systemml/blob/bd34292d/src/main/java/org/apache/sysml/runtime/instructions/gpu/DnnGPUInstruction.java
--
[SYSTEMML-445] Support non-CuDNN GPU operator for LSTM forward and backward
- Added corresponding GPU tests that compare the result of CuDNN operator with
the newly added operator. Also, the results are compared with DML-bodied LSTM
implementation in the nn layer.
- The LSTM forward operator
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/applications/parfor/ParForUnivariateStatsTest.java
--
diff --git
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/recompile/IPAAssignConstantPropagationTest.java
--
diff --git
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/frame/FrameMatrixReblockTest.java
--
diff --git
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/ternary/FullIfElseTest.java
--
diff --git
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/binary/matrix/MapMultLimitTest.java
--
diff --git
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/codegen/APICodegenTest.java
--
diff --git
Repository: systemml
Updated Branches:
refs/heads/master 7907c0ea5 -> 95bf8cfe6
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/unary/scalar/FullDistributionTest.java
[SYSTEMML-2496] Skip MapReduce tests as it is in maintenance mode
- This commit makes hybrid_spark as default runtime for junit tests to increase
the coverage of our spark backend.
- The FrameConverterTest and parfor tests are kept as is and can be modified in
subsequent commits.
- The
http://git-wip-us.apache.org/repos/asf/systemml/blob/95bf8cfe/src/test/java/org/apache/sysml/test/integration/functions/misc/FunctionInExpressionTest.java
--
diff --git
Repository: systemml
Updated Branches:
refs/heads/master 41de8dcdc -> 7907c0ea5
[SYSTEMML-1325] Harmonize Compilation Execution Pipelines and Add GPU
Support to JMLC
This PR adds support for compilation and execution of GPU enabled
scripts in JMLC and harmonizes the pipeline used to compile
Repository: systemml
Updated Branches:
refs/heads/master 11c67055a -> ef1945d70
[SYSTEMML-540] Allow user to generate an inlined DML script in Caffe2DML
- The inlining code is generic enough to be extended to perform parser-level
inlining. This commit allows us to compare the tradeoffs of
Repository: systemml
Updated Branches:
refs/heads/master 512fb9e11 -> 3702df7c1
[SYSTEMML-445] Improved the performance of batchnorm backward
- Added a custom kernel for computing dgamma in batch normalization
layer.
- Also, fixed a minor bug in GPUDenseInputPointerFetcher class.
Project:
Repository: systemml
Updated Branches:
refs/heads/master fab31fd1f -> 512fb9e11
[SYSTEMML-445] Extend coverage for GPU batchnorm test rewrite
- If inv_var rewrite has already been applied, the application of GPU
batchnorm test rewrite (and CuDNN batchnorm kernel) is skipped. This
commit fixes
Repository: systemml
Updated Branches:
refs/heads/master 8a144f2b3 -> fab31fd1f
[SYSTEMML-445] Fixed the error handling during GPU memory cleanup
If an error occurs during cleanup of temporary memory and free-ing of
GPU context, SystemML does not display the correct error message. This
commit
Repository: systemml
Updated Branches:
refs/heads/master ef15e582b -> 8a144f2b3
[MINOR] Bugfix in Keras2DML API when loading weights from Keras
Project: http://git-wip-us.apache.org/repos/asf/systemml/repo
Commit: http://git-wip-us.apache.org/repos/asf/systemml/commit/8a144f2b
Tree:
Repository: systemml
Updated Branches:
refs/heads/master 69624850e -> f46279a17
[SYSTEMML-445] Added memory stats for GPU allocation/eviction
- Also, reverted the shadow buffer to the original implementation as we are
getting OOM for lstm scripts. This likely has to do with pessimistic GC.
Repository: systemml
Updated Branches:
refs/heads/master 69f2d377c -> 69624850e
[SYSTEMML-445] Use PersistentLRUCache for shadow buffering
- Shadow buffer is cleared eagerly in case of garbage collection to avoid OOM
and is backed by org.apache.sysml.utils.PersistentLRUCache.
- Setting the
Repository: systemml
Updated Branches:
refs/heads/master 3fbfbaecb -> 69f2d377c
[SYSTEMML-445] Write to disk when the cache is used in the write-mode
- This avoids the need to depend on finalize to perform writing.
Project: http://git-wip-us.apache.org/repos/asf/systemml/repo
Commit:
Repository: systemml
Updated Branches:
refs/heads/master 61139e400 -> 3fbfbaecb
[SYSTEMML-445] Dynamically decide whether to perform float-to-double conversion
in the single precision mode on the host or device
- Fixed a int-to-long conversion bug in the shadow buffer.
- Updated javadocs for
Repository: systemml
Updated Branches:
refs/heads/master 0e323ec26 -> 61139e400
http://git-wip-us.apache.org/repos/asf/systemml/blob/61139e40/src/main/java/org/apache/sysml/runtime/controlprogram/context/ExecutionContext.java
[SYSTEMML-445] Added sparse scalar-matrix arithmetic/relational operators
Project: http://git-wip-us.apache.org/repos/asf/systemml/repo
Commit: http://git-wip-us.apache.org/repos/asf/systemml/commit/61139e40
Tree: http://git-wip-us.apache.org/repos/asf/systemml/tree/61139e40
Diff:
http://git-wip-us.apache.org/repos/asf/systemml/blob/61139e40/src/main/cpp/kernels/SystemML.ptx
--
diff --git a/src/main/cpp/kernels/SystemML.ptx
b/src/main/cpp/kernels/SystemML.ptx
index 1ab32f5..ac04967 100644
---
Repository: systemml
Updated Branches:
refs/heads/master 104b20e0b -> d2894feea
[MINOR] Throw an error if the user attempts to put null keys
- Also, added checks to verify persisted keys for debugging purposes
Project: http://git-wip-us.apache.org/repos/asf/systemml/repo
Commit:
Repository: systemml
Updated Branches:
refs/heads/master 1d2f4b630 -> 104b20e0b
[MINOR] Fixes a minor big in LRU cache
Closes #834.
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[SYSTEMML-445] Acquire read lock before copying from host to device
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[SYSTEMML-445] Removed unnecessary long-to-int conversion in LSTM
- Minor cleanup of the GPUObject class.
- Also, fixed incorrect forced GPU configuration flag.
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Repository: systemml
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refs/heads/master 2fc26b3dc -> 77c98d693
[MINOR] Fixed import error in Keras2DML
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[MINOR] Allow non-literal values in parameterized built-in functions
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[MINOR] Fixed javadoc errors
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[SYSTEMML-445] Removed batch_norm builtin functions
- Removed batch_norm builtin functions to exploit codegen in CP.
- Added rewrites for compiling efficient CuDNN operators.
- Added rewrites for SGD update
Repository: systemml
Updated Branches:
refs/heads/master 81419ae6a -> 0f36780a8
http://git-wip-us.apache.org/repos/asf/systemml/blob/0f36780a/src/main/java/org/apache/sysml/runtime/instructions/gpu/DnnGPUInstruction.java
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[SYSTEMML-445] Removed batch_norm builtin functions
- Removed batch_norm builtin functions to exploit codegen in CP.
- Added rewrites for compiling efficient CuDNN operators.
- Added rewrites for SGD update operations.
- To simplify adding new GPU rewrites, added HopDagPatternMatcher that allows
Repository: systemml
Updated Branches:
refs/heads/master 9e7ee19a4 -> be465dd65
Updates standalone jar dependencies with commons-lang3
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