On Tuesday, 11 March 2014 07:48:18 PM Ethan Merritt wrote:
> On Tuesday, 11 March 2014 07:29:50 AM Paul Emsley wrote:
> >
> > The font rendering of Coot has been niggling me for a while. I have
> > noticed a slowdown in the FPS when labels are added, but not perhaps as
> > much as you suggest.
On Tuesday, 11 March 2014 07:29:50 AM Paul Emsley wrote:
> On 11/03/14 06:29, Ethan A Merritt wrote:
> > On Sunday, 02 March, 2014 16:17:22 Ethan Merritt wrote:
> >> I recently acquired a new machine and found that my previous
> >> coot executables will not run on it, and neither will the
> >> stab
Another one to chalk on the list of things that would be nice to have but not
really needed - I feel like having a delete chain option in the ‘Delete item’
dialog would be very handy…
I often find myself needing to delete a chain (from a complex or oligomer for
example), and I always switch th
Hi all,
A couple of minor bugs/queries...
I’ve noticed in the past few daily builds that newly placed chain IDs have a
blank chain ID… I’m not sure whether this is deliberate or a bug, but I don’t
remember it being that way before? Perhaps defaulting to A might be better, in
case other program
Hi all,
I guess this is more of a feature suggestion than anything - I do not know how
hard it is to implement.
I really like the on-the-fly adjustment of map sharpening implemented in coot.
However, for large maps I find I have to use the scripting interface to change
the sharpening factor,
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Great! Thanks a lot, Andrew!
Cheers,
Tim
On 03/11/2014 02:04 PM, Andrew Leslie wrote:
> Hi Tim,
>
> CCP4 program ANGLES will compute phi,psi for you, is this helps.
>
> Andrew
>
>
> On 11 Mar 2014, at 11:13, Tim Gruene
> wrote:
>
>> Hello all,
Hi Tim,
CCP4 program ANGLES will compute phi,psi for you, is this helps.
Andrew
On 11 Mar 2014, at 11:13, Tim Gruene wrote:
> Hello all,
>
> is it possible to get a listing of all phi/psi angles in the peptide?
> When I click on the Ramachandran plot they are printed to the console -
> how t
On 11/03/14 11:13, Tim Gruene wrote:
is it possible to get a listing of all phi/psi angles in the peptide?
When I click on the Ramachandran plot they are printed to the console -
how to I get the entire list non-interactively?
Hi Tim,
I've been wanting to add this for a while. But it's not d
Hello all,
is it possible to get a listing of all phi/psi angles in the peptide?
When I click on the Ramachandran plot they are printed to the console -
how to I get the entire list non-interactively?
Cheers, Tim
--
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
Dear Tim,
good point. I have checked for duplicate installations and there is indeed
a second one from the ccp4 6.4.0 tree which hasn't precedence in the path.
Neverthless I have checked it out and it gives the same result.
Many thanks,
Michael
On 11 March 2014 09:53, Tim Gruene wrote:
> Dear
Dear Michael,
did you also check you are using the same binary? You might be using
findwaters from the CCP4 tree on the command line and from within the
coot-tree when using coot, in case you installed coot separately on top
of ccp4 (or maybe phenix?).
Best,
Tim
On 03/11/2014 08:14 AM, Michael E
Hi Paul,
thanks for your quick response.
On 11 March 2014 08:38, Paul Emsley wrote:
> On 11/03/14 07:14, Michael Engel wrote:
>
>> I can't reproduce the results I get by using find waters from within coot
>> when running findwaters on the command line on the same pdb/mtz. I have
>> double chec
On 11/03/14 07:14, Michael Engel wrote:
I can't reproduce the results I get by using find waters from within coot when
running findwaters on the command line on the same pdb/mtz. I have double
checked all the command line switches are the same and compared the output in
the log files. Nothing
On 11/03/14 06:29, Ethan A Merritt wrote:
On Sunday, 02 March, 2014 16:17:22 Ethan Merritt wrote:
I recently acquired a new machine and found that my previous
coot executables will not run on it, and neither will the
stable or "nightlies" built for Fedora/RHEL or Ubuntu.
No problem, I thought, I
Hi,
I can't reproduce the results I get by using find waters from within coot when
running findwaters on the command line on the same pdb/mtz. I have double
checked all the command line switches are the same and compared the output in
the log files. Nothing obviously different but I am getting
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