On 18/02/2022 16:03, Marcin Wojdyr wrote:
Hello,
I'm having a problem with viewing masks in Coot. I think it's related
to the filtering that is reported in the console output:
re-filter Map statistics: mean: 0.5525 st.d: 0.4972
Pre-filter Map statistics: min: 0 max: 1
INFO:: n grid points: 249480
INFO:: mean before filtering: 0.5525
INFO:: variance before filtering: 0.2472
INFO:: filter by ignoring 137844 of 249480 counts ( = 55.25%) with
values around 1 bounds 1 1 from bin-number 1 of 1
Post-filter Map statistics: mean: 5e-05 st.d: 1.54e-08
Is there a way to avoid this filtering?
Oh, I see, if there are only 2 values then filtering out the modal
values is not appropriate. There is a flag, but it didn't make it to the
scripting API.
...
I've added it now 3cc14edf66ae2bfede836621f0c776e95fe6b61f (refinement
branch)
set_ignore_pseudo_zeros_for_map_stats(state)
Paul.
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