Re: [deal.II] Re: mapping_collection and step-27

2017-12-05 Thread Wolfgang Bangerth
On 12/05/2017 05:47 PM, Juan Carlos Araujo Cabarcas wrote: On my topic, I have done as usual: git clone https://github.com/dealii/dealii.git dealii and proceeded with the configuration/installation of the library, to notice that I still have an error: When did you clone the repository?

Re: [deal.II] Re: mapping_collection and step-27

2017-12-05 Thread Juan Carlos Araujo Cabarcas
Thanks for your email and the encouragement, I will keep these reporting issues for sure! This thread was a nice lecture on templates! On my topic, I have done as usual: git clone https://github.com/dealii/dealii.git dealii and proceeded with the configuration/installation of the library, to

[deal.II] Re: Some cells have negative volume error

2017-12-05 Thread Bruno Turcksin
Narendra, On Tuesday, December 5, 2017 at 11:27:15 AM UTC-5, Narendra Nanal wrote: > > > When the input file is imported in abaqus it is working fine. Please see > attached pictures.I am not sure if something is wrong with the mesh. Kindly > guide me on how to resolve this error. Thanks in

Re: [deal.II] Re: Crack propagation

2017-12-05 Thread Timo Heister
> If I use your user element, I have to use OPEN MPI? now I have some issues > with Open MPI in Deal.ii What do you mean by "user element"? The example code in question requires deal.II to be configured with MPI. What vendor you use (OpenMPI, MPICH, ...) is up to you. -- Timo Heister

Re: [deal.II] error in SolverFGMRES related destructor

2017-12-05 Thread SebG
Dear Timo, dear Wolfgang, thank you for your replies. Lesson learned that ILU with the original sparsity pattern is not a good idea for the convection-diffusion block. I added the grad-div term such that I can just use the pressure mass matrix for the Schur complement. Further, I modified my

[deal.II] Re: Moving vertices of parallel triangulation breaks periodic face pair match

2017-12-05 Thread Sambit Das
Dear Dr. Arndt, I am using the GridTools::collect_periodic_faces(..) as a sanity check after moving the triangulation. I donot again set periodicity constraints. The documentation also mentions "it is possible to call this function several times with different boundary ids to generate a vector

Re: [deal.II] Re: Cmake-MPI

2017-12-05 Thread Wolfgang Bangerth
On 12/05/2017 08:05 AM, feap...@gmail.com wrote: I would ask, is It possible that I can delete all openmpi in ubuntu? then install a new one? That depends on how you installed them. If you used a package manager, you can uninstall packages through the package manager. The worst solution

Re: [deal.II] Re: Cmake-MPI

2017-12-05 Thread feapman
Dear Prof. Bangerth, Many thanks for your help! I would ask, is It possible that I can delete all openmpi in ubuntu? then install a new one? The worst solution maybe reinstall ubuntu system as before I have installed serveral versions of openmpi. Kind regards, Yaakov On Tuesday, December

[deal.II] Re: Moving vertices of parallel triangulation breaks periodic face pair match

2017-12-05 Thread Daniel Arndt
Sambit, your minimal example fails, because you are calling GridTools::collect_periodic_faces(triangulation, /*b_id1*/ 2*i+1, /*b_id2*/ 2*i+2,/*direction*/ i, periodicity_vector); after triangulation.refine_global(2); again. As explained in the documentation