[deal.II] Re: Post-processing with different cell material properties

2019-04-26 Thread Tuanny Cajuhi
Dear all, can I still use this implementation to output the material_ids together with the updated DataPostprocessor class? Thanks. Best, Tuanny On Sunday, August 14, 2016 at 3:54:18 PM UTC+2, Pete Griffin wrote: > > Thank you Daniel for your response. > > I took a while since I was trying

Re: [deal.II] constraint around hole / equivalent node

2017-08-18 Thread Tuanny Cajuhi
f_index%7Csort:relevance/dealii/8fUwabkznaU/VlTERBo-GQAJ> > and other post that reference "vertex_dof_index" for details on how to do > it. > > I hope that this helps you solve your problem! > Regards, > Jean-Paul > > > On Friday, August 18, 2017 at 10:05:36 A

Re: [deal.II] constraint around hole / equivalent node

2017-08-18 Thread Tuanny Cajuhi
Hi Wolfgang, thank you for the answers! >> Currently I am just using >> ​​ >> set_all_boundary_ids and set_manifold_id to identify the nodes around the >> hole. Is there a way to specify the equivalent node (the node in the middle >> related to the constrained nodes) in each hole and apply the b

[deal.II] constraint around hole / equivalent node

2017-08-17 Thread Tuanny Cajuhi
Dear all, I would like to simulate a compact tension test similar to the one shown here [1]. Currently I am just using set_all_boundary_ids and set_manifold_id to identify the nodes around the hole. Is there a way to specify the equivalent node (the node in the middle related to the constrai

[deal.II] Re: Now more than 1000 publications using deal.II :-)

2017-08-09 Thread Tuanny Cajuhi
Dear Wolfgang, our paper based on deal.II is online: Phase-field modeling of fracture in variably saturated porous media. T. Cajuhi, L. Sanavia, L. De Lorenzis. Comput Mech (2017) https://doi.org/10.1007/s00466-017-1459-3 Thanks for adding to the list. Best regards, Tuanny On Monday, July 17

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-09 Thread Tuanny Cajuhi
le deal.II as well. Thank you, Tuanny PS: Unloading the module atp helped to solve the problem I mentioned in the previous message. On Sunday, June 4, 2017 at 6:41:15 PM UTC+2, Tuanny Cajuhi wrote: > > Hi Rene, > > I asked them and as soon as I get an update I will post it here.

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-04 Thread Tuanny Cajuhi
Original message From: Tuanny Cajuhi Date: 6/3/2017 21:13 (GMT-05:00) To: dealii@googlegroups.com Subject: Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi Hi Rene, your explanation helped me a lot!! :)) I was able to run up to this

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-03 Thread Tuanny Cajuhi
Hi Rene, your explanation helped me a lot!! :)) I was able to run up to this point: [100%] Building CXX object source/numerics/CMakeFiles/obj_numerics_release.dir/vector_tools_rhs.cc.o Linking CXX shared library ../lib/libdeal_II.g.so /usr/bin/ld.gold: error: cannot find -lAtpSigHandler /usr/b

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-03 Thread Tuanny Cajuhi
e that helps a bit, Rene Am Donnerstag, 1. Juni 2017 09:53:01 UTC-6 schrieb Tuanny Cajuhi: Thanks a lot, Bruno. I will keep trying. On Thu, Jun 1, 2017 at 5:50 PM, Bruno Turcksin wrote: 2017-06-01 11:37 GMT-04:00 Tuanny Cajuhi :

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
Thanks a lot, Bruno. I will keep trying. On Thu, Jun 1, 2017 at 5:50 PM, Bruno Turcksin wrote: > 2017-06-01 11:37 GMT-04:00 Tuanny Cajuhi : > > You are right, thank you for the explanation. My code uses PetSc with > MUMPS. > > Just the output is done by Trilinos (the ide

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
You are right, thank you for the explanation. ​My code uses PetSc with MUMPS. Just the output is done by Trilinos (the idea of joint_fe). ​In summary, I need to add p4est. On Thu, Jun 1, 2017 at 5:29 PM, Bruno Turcksin wrote: > 2017-06-01 11:17 GMT-04:00 Tuanny Cajuhi : > > I think nu

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
It seems that the Cray has PetSc, I am not sure about MUMPS and I would need it. ​ > > Well you don't need numdiff and you can load bzip2 from a module > right? My question is more do you just need to install p4est and deal > and you can load modules for everything else or do you need to install >

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
> > > 1) ask your admin to install deal for you > ​I asked but it seems to not an option at the moment... 2) use spack that has support for cray but I don't think anyone has > ever tried to use spack to install deal on a cray. > ​I tried to install using spack as you suggested in the previous mes

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
I am on a cray (loaded module cray-mpich/7.5.1) and I don't know how to explicitly call one thing or the other On Thu, Jun 1, 2017 at 4:37 PM, Bruno Turcksin wrote: > 2017-06-01 10:34 GMT-04:00 Tuanny Cajuhi : > > I did not find any of them... :/ > That's very strange ho

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
I did not find any of them... :/ On Thu, Jun 1, 2017 at 4:29 PM, Bruno Turcksin wrote: > This is the problem "mpif77: command not found" Does mpif77 exist? If > not, does mpif90 exist? If yes try export F77=mpif90 > > 2017-06-01 10:21 GMT-04:00 Tuanny Cajuhi : > >

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
Hi Bruno, thank you. Are you using the same version of gfortran and gcc? Can you send the > whole config.log. I need to see what's the environment that p4est is > using. > /opt/gcc/6.2.0/bin/gfortran /opt/gcc/6.2.0/bin/gcc ​The log is attached. Thank you for the help! -- The deal.II project i

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
... and the 2 lines with 'error' in the config.log: configure:4404: error: in `/home/h/niitcaju/deal.ii-candi/tmp/build/p4est-2.0/FAST': configure:4406: error: Fortran 77 compiler cannot create executables On Thu, Jun 1, 2017 at 3:56 PM, Tuanny Cajuhi wrote: > Hi Bruno,

Re: [deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-06-01 Thread Tuanny Cajuhi
s See `config.log' for more details Best regards, Tuanny On Thu, Jun 1, 2017 at 2:34 PM, Bruno Turcksin wrote: > Tuanny, > > 2017-06-01 3:53 GMT-04:00 Tuanny Cajuhi : > > Failure with exit status: 1 > > Exit message: There was a problem building boost 1_63_0. > > (attach

[deal.II] Re: get errors when installing dealii on openSUSE Leap 42.1 by using candi

2017-05-31 Thread Tuanny Cajuhi
Dear all, I am trying to install dealii on a cluster using ./candi.sh --platform=./deal.II-toolchain/platforms/supported/linux_cluster.platform and I get the same error as reported here: *Building zlib 1.2.8 Compiler error reporting is too harsh for ./configure (perhaps remove -Werror). **