Bug#511521: boinc: Does not check the RSA_public_decrypt() return value.

2009-01-13 Thread Steffen Moeller
Frank S. Thomas wrote: > On Tuesday 13 January 2009 16:43:55 Rene Mayorga wrote: >> I was about to port this fix to 6.2.14-2, are everybody ok with this? > > FWIW: I'm ok with backporting this to the current version in Lenny. Lenny should not be without it, good point. My comment referred to my

Bug#511521: boinc: Does not check the RSA_public_decrypt() return value.

2009-01-13 Thread Steffen Moeller
Rene Mayorga wrote: > On Tue, Jan 13, 2009 at 04:24:27PM +0100, Steffen Moeller wrote: >> marcos.mar...@sonae.com wrote: >>> Upstream has a fix for this: >>> http://boinc.berkeley.edu/trac/changeset/16883 >> and they have introduced another since it may be

Bug#511521: boinc: Does not check the RSA_public_decrypt() return value.

2009-01-13 Thread Steffen Moeller
marcos.mar...@sonae.com wrote: > Upstream has a fix for this: > http://boinc.berkeley.edu/trac/changeset/16883 and they have introduced another since it may be "en- or decryption", not only "encryption" as their error message indicates. Whenever there is the next Debian release, this bug will be

Bug#507436: ITP: jalview -- multiple alignment editor

2009-01-13 Thread Steffen Moeller
The many jars are sadly partly incompatible when versions differ too much. I had some real bad time when I used Taverna with mixtures of self-created, official Debian and shipping jars. I hope that I don't sound too negative when I say that Jalview will not be DFSG compatible with us for quite

Bug#511243: RFA: boinc -- BOINC distributed computing infrastructure

2009-01-09 Thread Steffen Moeller
Rene Mayorga wrote: > On Thu, Jan 08, 2009 at 05:27:37PM -0600, Rene Mayorga wrote: >> Also, There is any chance to get sponsorship even that the team is not active >> on maintenance work ? >> > > BTW, my alioth user is `rmayorga-guest', but let see if there is still > more people interesting or i

Bug#510970: ITP: r-cran-randomforest -- GNU R package implementing the random forest classificator

2009-01-06 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller * Package name: r-cran-randomforest Version : 4.5-28 * URL : http://cran.r-project.org/web/packages/randomForest/ * License : GPL2+ Programming Lang: C,R Description : GNU R package implementing the

Bug#508637: [Debian-med-packaging] Bug#508637: mgltools-geomutils_1.5.4.cvs.20081126-1(sparc/experimental):, FTBFS: ImportError: No module named numpy

2008-12-13 Thread Steffen Moeller
Hi Peter, have many thanks for your report, I have just uploaded the fix. You are "just" a friendly builder and not actually a user of AutoDock on sparc by any chance, right? Best, Steffen -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Tr

Bug#508008: hplib: debian/control lacks conflict with hpoj

2008-12-06 Thread Steffen Moeller
Package: hplip Version: 2.8.6.b-3 Severity: normal I tried the automated installation of the newer version 2.8.10 which found my installation of hpoj and removed it since it claims to be incompatible with hplib. I suggest this incompatibility to make it into debian/control. -- System Informatio

Bug#507436: ITP: jalview -- multiple alignment editor

2008-12-01 Thread Steffen Moeller
Charles Plessy wrote: > Le Mon, Dec 01, 2008 at 11:34:17AM +0100, Vincent Fourmond a écrit : >> * Package name: jalview >> Version : 2.4 >> Upstream Author : Andrew Waterhouse; Jim Procter; David Martin; Geoff >> Barton >> * URL : http://www.jalview.org >> * License

Bug#507161: experiencing segmentation fault, no sound

2008-11-28 Thread Steffen Moeller
Package: etoys Version: 3.0.1916+svn132-2 Severity: normal Skype (not running) works with the sound system just butifully. However, I get no sound when playing etoys and get crashes instead. Some scripts crash immediately, others grant me a little while. AMD64 issue? Cheers, Steffen $ /usr/ga

Bug#506965: svn-buildpackage: ease auto-installation of build-dependencies

2008-11-28 Thread Steffen Moeller
Eddy Petrișor wrote: >>> I am unsure this is the best course of action, but would providing a >>> command dpkg-getbdeps which tries to install missing build-deps taking >>> into account the contents of debian/control, not the apt-cache, be >>> enough? >> I'd love it. Yes, this would be just fine.

Bug#506965: svn-buildpackage: ease auto-installation of build-dependencies

2008-11-28 Thread Steffen Moeller
Eddy Petrișor wrote: > 2008/11/28 Steffen Moeller <[EMAIL PROTECTED]>: >> Hallo Hauke, >> >> Jan Hauke Rahm wrote: >> >>> Am Mi, 26.11.2008, 15:11, schrieb Steffen Moeller: >>>> Hello, after some reading, there seems no link from svn-buildpac

Bug#506965: svn-buildpackage: ease auto-installation of build-dependencies

2008-11-28 Thread Steffen Moeller
Hallo Hauke, Jan Hauke Rahm wrote: > Am Mi, 26.11.2008, 15:11, schrieb Steffen Moeller: >> Hello, after some reading, there seems no link from svn-buildpackage >> to anything with the functionality of an apt-get build-dep. Particularly >> for those of us who are maintain

Bug#506965: svn-buildpackage: ease auto-installation of build-dependencies

2008-11-26 Thread Steffen Moeller
Package: svn-buildpackage Version: 0.6.23 Severity: wishlist Hello, after some reading, there seems no link from svn-buildpackage to anything with the functionality of an apt-get build-dep. Particularly for those of us who are maintaining a larger software suite that comes with a series of source

Bug#505444: ITP: eucalyptus -- cloud computing infrastructure

2008-11-12 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: eucalyptus Upstream Author : AYHEM Lab within the Computer Science Department at the University of California * URL : http://eucalyptus.cs.ucsb.edu * License : GPL, LGP

Bug#498192: (no subject)

2008-09-07 Thread Steffen Moeller
Package: installation-reports Boot method: netboot CD image Image version: the latest, probably, don't know if it was a daily build, my student did it Date: September 5, 2008 Machine: Transtec CL531WOU4-A Processor: 4 x Quad-Core AMD Opteron(tm) Processor 8354 Memory: 64BG Partitions: /dev/sda1

Bug#438779: boinc-client: update of package should not start new version automatically

2008-08-04 Thread Steffen Moeller
Frank S. Thomas wrote: > > the standard way how to disable > services (not restarting them on upgrades nor starting them at boot) is to > change the the S symlinks in /etc/rc?.d/ to K symlinks (so changing > /etc/rc?.d/S20boinc-client to /etc/rc?.d/K20boinc-client). This has the > desired ef

Bug#492524: ITP: r-cran-rocr -- GNU R package to prepare and display ROC curves

2008-07-26 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-rocr * URL : http://rocr.bioinf.mpi-sb.mpg.de * License : GPL Programming Lang: R Description : GNU R package to prepare and display ROC curves ROCR feature

Bug#492499: ITP: r-other-bio3d -- GNU R package for biological structure analysis

2008-07-26 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-other-bio3d Version : 1.0-5 * URL : http://mccammon.ucsd.edu/~bgrant/bio3d * License : GPL Programming Lang: R Description : GNU R package for biol

Bug#490832: plink and putty-tools

2008-07-24 Thread Steffen Moeller
Hi Jon, thank you for your pointer. I'll send an update, hopefully that is then just easily put into the release, that will conflict with the putty package. To have the binary renamed would render Debian incompatible with all those scripts distributed in the community that use that tool. I would h

Bug#492128: ITP: r-cran-qvalue -- Q-value estimation for false discovery rate control

2008-07-23 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-qvalue Version : 1.1 * URL : http://cran.r-project.org/web/packages/qvalue * License : LGPL Programming Lang: R Description : Q-value estimation for

Bug#492122: ITP: r-cran-haplo.stats -- GNU R package for haplotype analysis

2008-07-23 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-haplo.stats Version : 1.3.8 * URL : http://cran.r-project.org/web/packages/haplo.stats/index.html, http://mayoresearch.mayo.edu/mayo/research/schaid_lab/softwa

Bug#492114: ITP: r-cran-genetics -- GNU R package for population genetics

2008-07-23 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-genetics Version : 1.3.3 * URL : http://cran.r-project.org/web/packages/genetics * License : GPL Programming Lang: C, R Description : GNU R packa

Bug#492112: ITP: r-cran-combinat -- GNU R package providing utilities for combinatorics

2008-07-23 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-combinat Version : 0.0-6 * URL : http://cran.r-project.org/web/packages/combinat * License : GPL Programming Lang: R Description : GNU R package pro

Bug#492044: ITP: r-other-genabel -- genome-wide SNP association analysis

2008-07-23 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-other-genabel Version : 1.4-0 Upstream Author : Yurii Aulchenko <[EMAIL PROTECTED]> * URL : http://mga.bionet.nsc.ru/nlru/GenABEL/ * License : GPL 2+

Bug#491716: add dcut to package description such that apt-cache search finds it

2008-07-21 Thread Steffen Moeller
Package: dput Version: 0.9.2.32 Severity: minor Would be helpful. Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]

Bug#491714: ITP: libtfbs-perl -- module to scan DNA sequences with a position weight matrix

2008-07-21 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: libtfbs-perl Version : 0.5 * URL : http://tfbs.genereg.net/ * License : GPL, Artistic Programming Lang: C, Perl Description : module to scan DNA sequences

Bug#490710: FTBFS for 2.6.25-2

2008-07-16 Thread Steffen Moeller
Package: alsa-source Version: 1.0.16-2 Followup-For: Bug #490710 I have no idea if technically it is the same problem as the one that the original poster had. Symptomatically: yes! I used module-assistant auto-install alsa-sound with a previous call to module-assistant prepare, all as user root.

Bug#491025: ITP: biojava-live -- Java API to develop tools for bioinformatics research

2008-07-15 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: biojava-live Version : 1.6.0 * URL : http://www.biojava.org * License : LGPL Programming Lang: Java Description : Java API to develop tools for bioinfor

Bug#490832: ITP: plink -- whole-genome association analysis toolset

2008-07-14 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: plink Version : 1.03p1 Upstream Author : Shaun Purcell <[EMAIL PROTECTED]> * URL : http://pngu.mgh.harvard.edu/~purcell/plink * License : GPL Program

Bug#487973: ITP: r-cran-bitops -- GNU R package for bit operations

2008-06-25 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-bitops Version : 1.0-4 * URL : http://cran.stat.auckland.ac.nz/web/packages/bitops/ * License : GPL Programming Lang: R Description : GNU R package f

Bug#487956: ITP: r-cran-catools -- Collection of routines to help preparation of classifiers with R

2008-06-25 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: r-cran-catools Version : 1.8 * URL : http://cran.r-project.org/web/packages/caTools/ * License : GPL Programming Lang: R Description : Collection of routi

Bug#475923: Can confirm missing template error upon installation

2008-04-14 Thread Steffen Moeller
Package: console-data Version: 2:1.07-1 Severity: Grave Followup-For: Bug #475923 -- System Information: Debian Release: lenny/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 2.6.24-1-amd64 (SMP w/2 CPU cores) Locale: LANG=de

Bug#470115: apt-get: install with -t testing is fine, gets removed by update without flag

2008-03-28 Thread Steffen Moeller
Package: apt Version: 0.7.11 Followup-For: Bug #470115 Hello, maybe I have a simpler example of the same symptom. sun-java6-* has made it only partially through the build daemons, so it seems. It is not installable in unstable: $ LANG=C sudo apt-get install sun-java6-jdk [...] The following pack

Bug#470406: well, you have a point

2008-03-18 Thread Steffen Moeller
I am preparing and uploading an update that has the dependency removed and closes the bug. I must admit though that I do not like overly much to put this extra load on the buildds for this (in my perception) minor issue and I wished we could have announced the availability of the autodocksuite for

Bug#353724: CXXFLAGS also need to be changed

2008-03-11 Thread Steffen Moeller
Dear Thomas, I ran into the same problem as john, just 0.0.3b releases of gsoap later when the NorduGrid packages that I am just building with --enable-shared tried to link to gsoap++. --disable-shared in harmony with --enable-static works. To fix the beast, I also added CXXFLAGS in analogy to CF

Bug#467604: qtdmm: FTBFS: make: *** No rule to make target

2008-03-06 Thread Steffen Moeller
thanks Sune, I have no clue how this could have happened on my side and can only thank you for fixing it. Are you using qtdmm in routine? Would you consider adopting the package from me, then? Best, Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Troub

Bug#468202: subprocess post-installation script returned error exit status 1

2008-02-27 Thread Steffen Moeller
Package: openoffice.org-writer2latex Version: 0.5-5 Severity: grave There was nothing that I had done except for apt-get -u dist-upgrade in Debian Sid SM Setting up openoffice.org-writer2latex (0.5-5) ... Adding extension /usr/lib/openoffice/share/extension/install/writer2latex.uno.pkg... unopk

Bug#466858: new upstream version

2008-02-21 Thread Steffen Moeller
Package: libjgrapht-java Version: 0.6.0-4 Severity: wishlist Hello, there is a version 0.7.3 on http://sourceforge.net/projects/jgrapht, please update. Cheers, Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]

Bug#465994: ITP: gamgi -- general atomistic modelling graphic interface

2008-02-15 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: gamgi Version : 0.13.1 Upstream Author : Jose Carlos Pereira <[EMAIL PROTECTED]> * URL : http://www.gamgi.org/ * License : GPL Programming Lang: C

Bug#458811: ITP: mgltools -- preparation of proteins and ligands to analyse their binding

2008-01-02 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: mgltools Version : 1.5.0 * URL : http://mgltools.scripps.edu * License : various custom non-free, mostly academia-only Programming Lang: Python Descr

Bug#431224: deinstallation does not work either with + or * in package name

2007-12-15 Thread Steffen Moeller
Package: sysv-rc Version: 2.86.ds1-38.1 Followup-For: Bug #431224 Hello, please apply that patch, packages cannot be deinstalled either..which probably is not much of a surprise to you who you know the code, it just hit me on another system. Cheers, Steffen -- To UNSUBSCRIBE, email to [EMAI

Bug#451835: pbuilder --create --basetgz expects to be existing

2007-11-18 Thread Steffen Moeller
Package: pbuilder Version: 0.174 Severity: important Hello, I called pbuilder with a lot of options, and it failed, telling me that the argument after --basetgz (../sparc_base.tgz) was not existing. But pbuilder was supposed to create it, it was called with --create. After omitting the --basetgz

Bug#451193: ITP: vienna-rna -- RNA sequence analysis

2007-11-13 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: vienna-rna Version : 1.6.5 Upstream Author : Ivo Hofacker * URL : http://www.tbi.univie.ac.at/~ivo/RNA/ * License : non-free but redistributable Programming L

Bug#392228: presumed fix for man page indexing problem for apropos and whatis

2007-11-11 Thread Steffen Moeller
Package: garlic Version: 1.5-2 Followup-For: Bug #392228 $ zcat /usr/share/man/man1/garlic.1.gz|head -3 ..TH GARLIC 1 ..SH GARLIC garlic \- molecular visualization program I presume this should be ..SH NAME rather than ..SH GARLIC Cheers, Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTECTE

Bug#342475: Fixed in svn

2007-11-03 Thread Steffen Moeller
Package: bioperl Version: 1.4-1 Followup-For: Bug #342475 Hello, the svn graph Perl library was made available within Debian and the dependency added to the recommends section. The next upload will close the bug. Many thanks for your report. Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTEC

Bug#448487: sequential inspection of multiple bug reports shows always the same bug

2007-10-29 Thread Steffen Moeller
="vim" DEBEMAIL="[EMAIL PROTECTED]" DEBFULLNAME="Steffen Moeller" INTERFACE="text" ** /nfshome/moeller/.reportbugrc: reportbug_version "3.39" mode expert ui text smtphost "smtp.gmx.de" smtpuser "[EMAIL PROTECTED]" -- System Inf

Bug#447579: kdissert: new upstream version

2007-10-22 Thread Steffen Moeller
Package: kdissert Version: 1.0.6.c-2 Severity: normal There is a new upstream version on http://freehackers.org/~tnagy/kdissert/kdissert-1.0.7.tar.bz2 Although there is a new development named "Semantic" around the corner, I still think that it would be worthwhile to bring kdissert up to the late

Bug#447505: ITP: tm-align -- structural protein alignment

2007-10-21 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: tm-align Version : just a date in the source from 2005, no version * URL : http://zhang.bioinformatics.ku.edu/TM-align/ * License : free to change and redist

Bug#447481: reportbug: When sending feedback to a closed bug then optionally reopen it

2007-10-21 Thread Steffen Moeller
Package: reportbug Version: 3.39 Severity: wishlist I just sent in a comment to a bug that was already closed since the new Debian package that closed the bug did not fix the problem. Reportbug could have detected that the bug was already closed and ask me if I would prefer the bug to be reopened.

Bug#441987: libmodule-build-perl: Still, 1p != 1pm in lintian

2007-10-21 Thread Steffen Moeller
Package: libmodule-build-perl Version: 0.2808-0.1 Followup-For: Bug #441987 Hello, I just happily updated libmodule-build-perl and got tons of lintian errors for bioperl, still. Well, a quick grep helped to elucidate the issue: /usr/share/perl5/Module/Build/Base.pm:my $parser = Pod:

Bug#445173: 1.0 indeed helps shibboleth

2007-10-03 Thread Steffen Moeller
Hello again, I found this entry in the changelogs of log4cpp, it seems that the update of log4cpp to version 1.0 also closes bug#432729, indeed. Best, Steffen 2007-08-19 12:36 dark--angel * configure.in: Fixed pthread. See https://mail.internet2.edu/wws/arc/shibboleth-users

Bug#445173: liblog4cpp4: Upstream released 1.0 version

2007-10-03 Thread Steffen Moeller
Package: liblog4cpp4 Version: 0.3.5-rc3-1 Severity: normal The current Debian package is the same from etch to sid but has issues with thread handling. This renders it unusable for the grid community, i.e., for those using Shibboleth as reported in bug #432729. I have not seen the release notes

Bug#443170: dh-make-perl: add typical dh_make options, i.e., -e

2007-09-19 Thread Steffen Moeller
Package: dh-make-perl Severity: wishlist Sorry, I know, I should have submitted a patch. Bash me if you want it from me. My wish is that you adopt as much as possible from dh_make with respect to its command line interface. The lack of -e just hit me. SYNOPSIS dh_make [-nlsmiadh] [-c lic

Bug#437459: boinc-client: [patch] upcoming change in /proc/cpuinfo on powerpc

2007-09-18 Thread Steffen Moeller
On Tuesday 18 September 2007 09:20:22 Frank S. Thomas wrote: > I've forwarded your report to upstream and David Anderson applied the patch > to the current trunk, see http://boinc.berkeley.edu/trac/changeset/13593. > This change will appear in Debian with the first 6.x BOINC version. Good job -

Bug#441987: libmodule-build-perl: manpages produced spawn lintian errors section != file suffix

2007-09-12 Thread Steffen Moeller
Package: libmodule-build-perl Version: 0.28.0.5 Severity: important Tags: patch Hello, the man pages produced by libmodule-build-perl are not conform to the checks performed by lintian since the specified section in the manpage (1 or 3) does not reflect to the specified section by the file name'

Bug#365241: libmodule-build-perl: Version >0.2805 needed for BioPerl

2007-09-11 Thread Steffen Moeller
Package: libmodule-build-perl Followup-For: Bug #365241 Hello, as newer version of your libmodule-build-perl is required to compile the BioPerl 1.5.2 sources. I'd prepare to help with maintenance if this is an issue. The previous request asking for a newer version is apparently a year old alrea

Bug#441840: ITP: infernal -- RNA sequence comparisons

2007-09-11 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: infernal Version : 0.81 Upstream Author : Sean Eddy * URL : http://infernal.janelia.org/ * License : GPL Programming Lang: C, C++ Description : RNA se

Bug#441212: gsoap: New upstream version

2007-09-07 Thread Steffen Moeller
Package: gsoap Version: 2.7.9b-1.1 Severity: wishlist Hi Thomas, are you aware of version ...k to be out? Kind regards Steffen -- System Information: Debian Release: lenny/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (500, 'stable') Architecture: i386 (i686) Kern

Bug#440816: ITP: bytecode -- Java library to access bytecode

2007-09-04 Thread Steffen Moeller
On Tuesday 04 September 2007 23:48:49 you wrote: > On Tue, Sep 04, 2007 at 03:58:12PM +0200, Steffen Moeller wrote: > > Upstream Author : Name <[EMAIL PROTECTED]> > > * URL : http://www.example.org/ > > Nice upstream author and upstream url. There is not m

Bug#440816: ITP: bytecode -- Java library to access bytecode

2007-09-04 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: bytecode Version : 0.92 Upstream Author : Name <[EMAIL PROTECTED]> * URL : http://www.example.org/ * License : LGPL Programming Lang: Java Descriptio

Bug#438779: boinc-client: update of package should not start new version automatically

2007-08-30 Thread Steffen Moeller
On Thursday 30 August 2007 18:49, Frank S. Thomas wrote: > Moin moin Steffen! > > On Sunday 19 August 2007, Steffen Moeller wrote: > > This is more a reminder for myself than a real bug report. I though it > > was preferable to start the client post installation only > >

Bug#439510: business-card print material to be distribted with signing-party?

2007-08-25 Thread Steffen Moeller
Package: signing-party Version: 0.4.12-1 Severity: wishlist Hello, Christian <[EMAIL PROTECTED]> surprised me with his Debian business card from http://www.debian.org/events/materials/business-cards/ while I ran around with the gpg-key2ps generated files everywhere, which made much less of an i

Bug#439060: devscripts: [uscan] destination directory to download files should be specifyable

2007-08-21 Thread Steffen Moeller
Package: devscripts Version: 2.10.7 Severity: wishlist Tags: patch Hello. Is there something like a critical wish? Please adopt my patch that adds a --destdir option to uscan. It caters for an improved integration of uscan with source code management systems (SCMs) for the sponsoring of packag

Bug#438779: boinc-client: update of package should not start new version automatically

2007-08-19 Thread Steffen Moeller
Package: boinc-client Version: 5.10.8-1 Severity: wishlist This is more a reminder for myself than a real bug report. I though it was preferable to start the client post installation only * when there was no prior installation of boinc-client * there was a prior installation and it was running

Bug#435232: debian/control: missing version information for emboss-lib ?!?

2007-07-30 Thread Steffen Moeller
Package: emboss Version: 5.0.0-1 Severity: wishlist Hello Charles, I was asked to update the emboss-lib package. Should this possibly receive the same constraint in debian/control that the suggested emboss-doc package gets, namely to have the exact same version as the emboss package itself? Chee

Bug#434654: ITP: autodocksuite -- analysis of ligand binding to protein structure

2007-07-25 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name : autodocksuite Version : 4.0.1 URL : http://autodock.scripps.edu License : GPL Description : analysis of ligand binding to protein structure AutoDock is a well-established suite of programs f

Bug#431404: ITP: exonerate -- generic tool for pairwise sequence comparison

2007-07-02 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: exonerate Version : 1.4.0 Upstream Author : Guy Slater * URL : http://www.ebi.ac.uk/~guy/exonerate/ * License : LGPL Programming Lang: C Description : g

Bug#431392: wise: new version 2.4.0 is out

2007-07-02 Thread Steffen Moeller
Package: wise Version: 2.2.0-5 Severity: wishlist Hi, there is a new version of the wise tools out. It would be great if you found the time for it since I am curious to investigate the new "promoterwise" method. Best regards, Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subjec

Bug#431224: update-rc.d: package names with + or * not installable

2007-06-30 Thread Steffen Moeller
Package: sysv-rc Version: 2.86.ds1-38 Severity: important Tags: patch dpkg calls update-rc.d to execute the post-inst script. In line 110, the name of the package becomes part of a regular expression. The occurrence of + or other characters with a special meaning that may be part of the package na

Bug#431175: ITP: fact++ -- description logic reasoner for the semantic web

2007-06-30 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: fact++ Version : 1.1.7 Upstream Author : Dmitry Tsarkov * URL : http://code.google.com/p/factplusplus/ * License : GPL Programming Lang: C, C++, Java Descr

Bug#427290: RM: textopo -- RoM; redundant with texlive-science

2007-06-02 Thread Steffen Moeller
Package: ftp.debian.org Severity: normal Kind regards Steffen -- System Information: Debian Release: lenny/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (500, 'stable'), (1, 'experimental') Architecture: i386 (i686) Kernel: Linux 2.6.20-1-686 (SMP w/1 CPU core)

Bug#427172: xorg: no dependency of xorg to xorg-docs

2007-06-02 Thread Steffen Moeller
Package: xorg Severity: wishlist File: xorg Hello, the chain of dependencies from x-window-system -> xorg -> xorg-docs installs the considerable number of PDFs that I do not consider necessary for a regular user. The xorg-docs should be recommended, but not on the depends line IMHO. Should I ove

Bug#427034: dot2tex: --figonly does not work

2007-06-01 Thread Steffen Moeller
Dear Kjell, On Friday 01 June 2007 17:22:03 Kjell Magne Fauske wrote: > On 6/1/07, Peter Collingbourne <[EMAIL PROTECTED]> wrote: > > This problem seems to only occur if the tikz output format is used. The > > attached patch should solve the problem. I will make a release shortly > > with the pa

Bug#427034: dot2tex: --figonly does not work

2007-06-01 Thread Steffen Moeller
Package: dot2tex Version: 2.0.1-1 Severity: normal Hi, the --figonly does not work for me, it is just ignored. | sed -e '1,/Start of code/d' -e '/End of code/,$d' is what I do to circumvent this problem, but you may have another idea about it. Cheers, Steffen -- System Information: Debian Rel

Bug#409694: dh-make: support for dpatch added, changelog now lintian-clean

2007-02-04 Thread Steffen Moeller
of dpatch. + + -- Steffen Moeller <[EMAIL PROTECTED]> Sun, 4 Feb 2007 12:43:06 +0100 + dh-make (0.42) unstable; urgency=low * Stopped shiiping the kde examples (Closes: #372287) @@ -22,7 +28,7 @@ * Kernel module rules use sname Closes: #350938, #354883 * Typo removed from kernel rules o

Bug#406853: patch update

2007-02-04 Thread Steffen Moeller
On Sunday 04 February 2007 16:00:22 Thibaut VARENE wrote: > On 2/3/07, Thibaut VARENE <[EMAIL PROTECTED]> wrote: > > On 2/3/07, Steffen Moeller <[EMAIL PROTECTED]> wrote: > > > Salut Thibaut, > > > > > > On Saturday 03 February 2007 01:38:34 Thib

Bug#406853: patch update

2007-02-03 Thread Steffen Moeller
Salut Thibaut, On Saturday 03 February 2007 01:38:34 Thibaut VARENE wrote: > Attached is an updated patch to deal with sparc machines (tested on my Sun > U30). I had a quick glimpse at your patch and liked it, at least as a start, suggesting to place it as a dpatch into the debian/patches folder

Bug#407461: boinc-client sends bogus platform '' on amd64

2007-01-21 Thread Steffen Moeller
On Sunday 21 January 2007 15:55, Thibaut VARENE wrote: > On 1/21/07, Frank S. Thomas <[EMAIL PROTECTED]> wrote: > > > I don't know if that's of any help, but I tested on an Ubuntu Dapper > > > machine (which has 5.4.9) and there it works just fine. > > > > > > I'll see if I can investigate this mor

Bug#407678: boinc-client: /etc/boinc-client files should be 640 root:boinc (passwd leakage)

2007-01-20 Thread Steffen Moeller
Hi Thibaut, you made a good point from how I see it. I could imagine a group of users that is assigned to the boinc group for editing the files. Should the permission then not rather be 660 ? Many greetings Steffen (who has collected 490 credits since you pointed him to boincsimap) On Saturda

Bug#407461: boinc-client sends bogus platform '' on amd64

2007-01-18 Thread Steffen Moeller
Hi Thibaut, I just tested 5.4.11-4 on an AMD X2 4200+ with Debian's SETI client which is fine. On all other 5 projects I tried so far did not support the _64 platform and reported that with the exact message that you where expecting. While I am not convinced about the scientific merits of SIMAP

Bug#405624: ITP: libjson.org-java -- Fat-Free Alternative to XML

2007-01-04 Thread Steffen Moeller
Package: wnpp Owner: Steffen Moeller <[EMAIL PROTECTED]> Severity: wishlist *** Please type your report below this line *** * Package name: libjson.org-java Upstream Author : [EMAIL PROTECTED] * URL : www.json.org/java * License : unrestricted Programming Lang

Bug#403476: ITP: r-cran-r2html -- GNU R package to ease HTML formatting

2006-12-17 Thread Steffen Moeller
Package: wnpp Owner: Steffen Moeller <[EMAIL PROTECTED]> Severity: wishlist *** Please type your report below this line *** * Package name: r-cran-r2html Version : 1.58 * URL : http://www.feferraz.net/en/R2HTML.html * License : GPL Programming L

Bug#403474: ITP: r-cran-cgiwithr -- GNU R package for web-access to R scripts

2006-12-17 Thread Steffen Moeller
Package: wnpp Owner: Steffen Moeller <[EMAIL PROTECTED]> Severity: wishlist *** Please type your report below this line *** * Package name: r-cran-cgiwithr Version : 0.72 * URL : http://www.omegahat.org/CGIwithR * License : GPL Programming L

Bug#401600: problem can be closed

2006-12-06 Thread Steffen Moeller
Hi Folkert, On Wednesday 06 December 2006 20:08, Folkert van Heusden wrote: > The problem can be closed. > The solutions was: > do NOT do: > g++ -lboinc file.cpp > but to > g++ file.cpp -lboinc > instead (which puzzles me but hey it works). ah, ok, I thought it was omitted. As a try of a possible

Bug#401600: constructor/de-constructor never found for all testprograms build against boinc-dev

2006-12-05 Thread Steffen Moeller
On Monday 04 December 2006 22:35, Folkert van Heusden wrote: > > > Nothing builds with this library. > > > > That's not true. The boinc-app-seti package builds with this package > > (therefore I'm downgrading the severity of this bug). Maybe you should > > have a look at boinc-app-seti's makefiles

Bug#360044: itp

2006-11-17 Thread Steffen Moeller
Hi, I have package ready for a while and have almost forgotten about it. What is missing is a reply from upstream if he would appreciate it. I have not asked again, I probably should. If you are interested in my package, to sponsor me, or to maintain it, then at least I would appreciate it. B

Bug#366898: ITP: texshade -- LaTeX package presenting multiple sequence alignments

2006-05-11 Thread Steffen Moeller
Package: wnpp Owner: Steffen Moeller <[EMAIL PROTECTED]> Severity: wishlist *** Please type your report below this line *** * Package name: texshade Version : 1.13 Upstream Author : Erik Beitz * URL : * http://homepages.uni-tuebingen.de/beitz/texshade.html * L

Bug#362257: boinc-client: -no_gui_rpc option is poorly named andmisleading

2006-04-13 Thread Steffen Moeller
Greetings Steffen Am Donnerstag 13 April 2006 13:49 schrieb Frank S. Thomas: > Would be >-no_gui_rpc >don't allow GUI RPC connections, don't make socket. >If this option is given the client can't be controlled >by the BOINC command tool (boinc_c

Bug#360044: ITP: cryopid -- Dumps a process to restart it later and possibly elsewhere

2006-03-30 Thread Steffen Moeller
Package: wnpp Owner: Steffen Moeller <[EMAIL PROTECTED]> Severity: wishlist *** Please type your report below this line *** * Package name: cryopid Version : 0.5.9.i386 Upstream Author : Bernard B <[EMAIL PROTECTED]> * URL : http://cryopid.berlios.d

Bug#341688: r-bioc-repostools: MIAME load function is missing

2005-12-03 Thread Steffen Moeller
Hi all, the script is explained at the Wiki site of the BioC project. deb [WWW] http://public.pzr.uni-rostock.de/~moeller/mirror ./ The URL provided for the repository is currently defunct since both the machines and myself have physically moved. Kind regards Steffen -- To UNSUBSCRIBE, em

Bug#327961: Patch for NMU 0.8.4-1.1

2005-09-27 Thread Steffen Moeller
Hi Luk, thank you for the NMU. I debianised a new upstream version of qtdmm that accomodates your patch in http://public.pzr.uni-rostock.de/~moeller/debian/qtdmm/ and informed my sponsor Andreas <[EMAIL PROTECTED]> about its existance. Cheers, Steffen -- To UNSUBSCRIBE, email to [EMAIL PROTE

Bug#325183: gcj: libgcj.spec: No such file or directory

2005-08-26 Thread Steffen Moeller
Package: gcj-4.0 Severity: normal Analogous to version 3.3 of gcj, reported as Bug#238033, gcj reports on a missing spec file because of a missing dependency to libgcj-dev. Adding that made the problem disappear. ii libgcj-dev 4.0.1-3 Java development

Bug#322702: openoffice.org2-writer: Missing dependency to libstlport

2005-08-12 Thread Steffen Moeller
Package: openoffice.org2-writer Version: 1.9.121 Severity: important Please add libstlport4 to the dependencies. I have no [EMAIL PROTECTED]:~$ /usr/lib/openoffice2/program/soffice & [1] 11207 I have no [EMAIL PROTECTED]:~$ /usr/lib/openoffice2/program/javaldx: error while loading shared librarie

Bug#322059: ncbi-tools6: Provides 2 dummy packages, still needed?

2005-08-09 Thread Steffen Moeller
Hi, I took over maintenance from Andreas Tille a while back who since then kindly sponsors most of my packages, including Clustal[XY]. I wanted to wait for a new upstream release of ClutalW before going through the problem of compiling it on all the platforms it ran on before. You now gave me anoth

Bug#320777: ITP: libtfbs-perl -- [Biology] Library for handling transcription factor binding sites

2005-08-01 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: libtfbs-perl Version : 0.5.0 Upstream Author : Boris Lenhard <[EMAIL PROTECTED]> * URL : http://forkhead.cgb.ki.se/TFBS/ * License : artistic

Bug#320329: RFP: exonerate -- [Biology] Pairwise comparison of nucleotide sequences

2005-07-28 Thread Steffen Moeller
Package: wnpp Severity: wishlist * Package name: exonerate Version : 1.0.0 Upstream Author : Guy Slater <[EMAIL PROTECTED]> * URL : http://www.ebi.ac.uk/~guy/exonerate/ * License : LGPL Description : [Biology] Pairwise comparison of nucleotide sequences

Bug#319330: ITP: mipe -- [Biology] Tools for storing data on PCR experiments

2005-07-21 Thread Steffen Moeller
Package: wnpp Severity: wishlist Owner: Steffen Moeller <[EMAIL PROTECTED]> * Package name: mipe Version : 1.1 Upstream Author : Jan Aerts <[EMAIL PROTECTED]> * URL : http://mipe.sourceforge.net * License : LGPL Description : [Biology] Tool t

Bug#318408: RFP: cactus -- environment for scientific and distributed computing

2005-07-15 Thread Steffen Moeller
Package: wnpp Severity: wishlist * Package name: cactus Version : 4.0 Upstream Author : Cactus Maintainer <[EMAIL PROTECTED]> * URL : http://www.cactuscode.org/ * License : GPL Description : environment for scientific and distributed computing Cactus is

Bug#312533: graphviz-dev: /etc/ld.so.conf entry for /usr/lib/graphviz missing

2005-06-08 Thread Steffen Moeller
appropriate commands add to the postinst and postrm scripts of graphviz to be adoptable from the atlas3-base package. /var/lib/dpkg/info/atlas3-base.post{inst,rm} Kind regards and thanks Steffen Moeller -- System Information: Debian Release: 3.1 APT prefers testing APT policy: (900, 'te

<    2   3   4   5   6   7   8   >