Bug#766676: /usr/bin/Xorg: symbol lookup error: /usr/lib/xorg/modules/linux/libglx.so: undefined symbol: LoadExtension

2014-10-24 Thread Yaroslav Halchenko
Source: fglrx-driver Version: 1:14.9+ga14.201-2 Severity: important Dear Maintainer, * What led up to the situation? installation of fglrx-driver and associated packages + reboot * What exactly did you do (or not do) that was effective (or ineffective)? upgrade of fglrx

Bug#712836: confirming NMU which should close these 2 issues

2014-10-24 Thread Yaroslav Halchenko
-intersectio.patch + resolves segfault while rendering some graphs (Closes: #766479) + + -- Yaroslav Halchenko deb...@onerussian.com Fri, 24 Oct 2014 15:36:28 -0400 + cairo (1.14.0-2) unstable; urgency=medium * Modernise debian/rules using minimised dh. diff -Nru cairo-1.14.0/debian/patches/0005-CFF

Bug#766479: /usr/bin/dot: segfault while rendering png. Leads to FTBFS for another pkg

2014-10-23 Thread Yaroslav Halchenko
Package: graphviz Version: 2.38.0-6 Severity: important File: /usr/bin/dot Tags: upstream Dear Maintainer, Causes FTBFS for a new version of nipype which I was about to upload. Sample file http://www.onerussian.com/tmp/tmpjBvUTb.dot Command dot -Tpng -O /tmp/tmpjBvUTb.dot actual

Bug#766484: FTBFS in a cowbuilder: Error: listen EADDRNOTAVAIL

2014-10-23 Thread Yaroslav Halchenko
Package: nodejs Version: 0.10.29~dfsg-1 Severity: serious Justification: fails to build from source (but built successfully in the past) testing seems to require establishing some local server instance and somehow failing on my box with a conventional cowbuilder chroot of up-to-date sid ...

Bug#766479: another sample

2014-10-23 Thread Yaroslav Halchenko
fwiw -- whenever original sample doesn't fail on my laptop, this one does http://www.onerussian.com/tmp/tmpeDlMri.dot -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,Psychological and Brain Sciences Dept.

Bug#766217: syntax errors etc while running

2014-10-21 Thread Yaroslav Halchenko
Package: pius Version: 2.0.11-1 Severity: important File: /usr/bin/pius-party-worksheet $ pius-party-worksheet my variable $i masks earlier declaration in same statement at /usr/bin/X11/pius-party-worksheet line 81. my variable $i masks earlier declaration in same statement at

Bug#765147: seaborn: FTBFS: unsatisfiable build-dependency: python-matplotlib ( 1.2.0~) but 1.3.1-2 is to be installed

2014-10-13 Thread Yaroslav Halchenko
On Mon, 13 Oct 2014, David Suárez wrote: Source: seaborn Version: 0.4.0-1 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20141012 qa-ftbfs Justification: FTBFS on amd64 Hi, During a rebuild of all packages in sid, your package failed to build on

Bug#765020: doesn't start: ImportError: cannot import name Wnck, introspection typelib not found

2014-10-12 Thread Yaroslav Halchenko
Package: kazam Version: 1.4.5-1 Severity: important running awesome under XFCE 4, mix of jessie/sid $ kazam Traceback (most recent call last): File frozen importlib._bootstrap, line 2158, in _find_spec AttributeError: 'DynamicImporter' object has no attribute 'find_spec' During handling of

Bug#764746: bugfix release 0.8.1 is available

2014-10-10 Thread Yaroslav Halchenko
Package: python-jedi Version: 0.8.0-1 Severity: normal Apparently some issues in 0.8.0 are known to trigger failed cython tests. So it would be nice if jedi was upgraded before the freeze -- System Information: Debian Release: jessie/sid APT prefers testing APT policy: (900, 'testing'),

Bug#763136: [Pkg-freeipmi-devel] Bug#763136: Bug#763136: Bug#763136: [freeipmi-bmc-watchdog] Duplicate logrotate.d entries

2014-10-07 Thread Yaroslav Halchenko
Thank you Ferenc. Merged the bug/763136b (I think less of a ping pong of file renames would be better), and will build/upload shortly (also will provide backports from neurodebian) Cheers! On Tue, 07 Oct 2014, Ferenc Wagner wrote: Yaroslav Halchenko deb...@onerussian.com writes

Bug#763136: [Pkg-freeipmi-devel] Bug#763136: Bug#763136: [freeipmi-bmc-watchdog] Duplicate logrotate.d entries

2014-10-06 Thread Yaroslav Halchenko
but shouldn't we keep bmc-watchdog.log not freeipmi-bmc-watchdog.log to somewhat match default/init.d file naming? On Mon, 06 Oct 2014, Ferenc Wagner wrote: tags 763136 patch thanks I pushed a new branch bug/763136 to Alioth, please review, merge (fast forward), delete and upload as

Bug#764307: 0.3 was released, and carries fix for #739898

2014-10-06 Thread Yaroslav Halchenko
Package: python-git Version: 0.3.2~RC1-3 Severity: wishlist Please update the package, or let me know if I should do as a team upload. Cheers! -- System Information: Debian Release: jessie/sid APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'), (300, 'experimental')

Bug#763622: backport 5.20140927~bpo70+1 is not installable due to unsatisfied git version in backports repo

2014-10-01 Thread Yaroslav Halchenko
Package: git-annex Version: 5.20140927~bpo70+1 Severity: important # apt-cache policy git-annex git git-annex: Installed: 4.20131106~bpo70+1 Candidate: 5.20140927~bpo70+1 Version table: 5.20140927~bpo70+1 0 100 http://mirrors.kernel.org/debian/ wheezy-backports/main amd64

Bug#623649: nmu for matlab-support

2014-09-28 Thread Yaroslav Halchenko
On Sun, 28 Sep 2014, Michael Gilbert wrote: control: tag -1 patch, pending Hi, I've uploaded an nmu to delayed/10 remove the libxp dependency. matlab versions have not required this for 4 years now, and this is one of two packages remaining with the dependency. I am not the main maintainer

Bug#760920: [Pkg-freeipmi-devel] Bug#760920: freeipmi: incomplete SONAME bump

2014-09-09 Thread Yaroslav Halchenko
On Tue, 09 Sep 2014, Jonathan Wiltshire wrote: Package: freeipmi Version: 1.4.4-1 there is a 1.4.4-1.1 now ;-) Severity: serious Hi, Looks like the symbol file for libipmimonitoring5a was not properly bumped when the new upstream version was uploaded: $ head -n 1

Bug#760730: python-sklearn-doc: Please build the HTML documentation

2014-09-08 Thread Yaroslav Halchenko
gotcha -- was a little bug in debian/rules thanks... if builds fine -- will upload shortly On Sun, 07 Sep 2014, Federico Ceratto wrote: Package: python-sklearn-doc Version: 0.15.1-1 Severity: normal Hi and thank you for packaging sklearn. The HTML documentation in the -doc package is not

Bug#760657: [cmtk]Non free files under GFDL with invariant or front-cover or back-cover texts

2014-09-08 Thread Yaroslav Halchenko
the header of that file has This manual describes how to install and use Numdiff, a program which compares putatively similar files line by line and field by field, ignoring small numeric differences or/and different numeric formats. Copyright (C) 2005, 2006, 2007, 2008, 2009, 2010 Ivano Primi

Bug#760651: [Pkg-mc-devel] Bug#760651: incorrect ETA when sftping files with deref symlinks

2014-09-08 Thread Yaroslav Halchenko
On Sat, 06 Sep 2014, Yury V. Zaytsev wrote: I am copying some files which on remote end are under git-annex, thus symlinks. Hi Yarik, A new version (4.8.13) has just been released but didn't make it into Debian yet. Does it still have the same problem? If yes, then it should be

Bug#760651: [Pkg-mc-devel] Bug#760651: incorrect ETA when sftping files with deref symlinks

2014-09-08 Thread Yaroslav Halchenko
On Mon, 08 Sep 2014, Yury V. Zaytsev wrote: On Mon, 2014-09-08 at 10:12 -0400, Yaroslav Halchenko wrote: wow -- nice to see more vc/FAR-inspired linux folks? ;) I used to be an active contributor to mc, until you know what happened :-/ The panels of nc3 are my first memory of a computer

Bug#760843: fail2ban: logrotate script hardcodes logtarget

2014-09-08 Thread Yaroslav Halchenko
thank you Reinhard, just want to note that in recent versions we just added a 'fail2ban-client flushlogs' command which would accomplish this. not sure if I would upload this change for wheezy... for sid/jessie -- we should rush out a fresh upstream release and it will get into sid with an

Bug#532356: Debian bug #532356

2014-09-08 Thread Yaroslav Halchenko
On Mon, 08 Sep 2014, Jörg Frings-Fürst wrote: Hello, I don't get a answer for 2 month. So I think that this bug can be closed. do whatever needs to be done ;) Please feel free to reopen this bug if the error still occurs. ok -- thanks... happen I get to that box again (trying to upgrade

Bug#691439: [Pkg-freeipmi-devel] Bug#691439: freeipmi: diff for NMU version 1.4.4-1.1

2014-09-07 Thread Yaroslav Halchenko
Thanks! while at it then: other packages seems needing similar treat libfreeipmi-dev freeipmi-ipmidetect freeipmi-bmc-watchdog freeipmi-tools On Sun, 07 Sep 2014, Jonathan Wiltshire wrote: Control: tags 691439 + patch Control: tags 691439 + pending Dear maintainer, I've prepared an NMU

Bug#760651: incorrect ETA when sftping files with deref symlinks

2014-09-06 Thread Yaroslav Halchenko
Package: mc Version: 3:4.8.12-1 Severity: normal I am copying some files which on remote end are under git-annex, thus symlinks.

Bug#650394: [Pkg-tigervnc-devel] Bug#650394: updated packages available

2014-09-04 Thread Yaroslav Halchenko
On Thu, 04 Sep 2014, Pierre Ossman wrote: (2) Have all of Pierre's Fltk patches been incorporated into the native debian Fltk package?   hm, personally -- don't know. looking at the packaging 1.3.2-6 we have doesn't seems to carry this one, http://www.fltk.org/str.php?L2599,

Bug#759907: spykeviewer: FTBFS: ImportError: No module named module_completion

2014-09-01 Thread Yaroslav Halchenko
Thank you Andrey for the note. Robert -- should I expect a new upstream release or just patched debian pkg? ;) Cheers! On Mon, 01 Sep 2014, Andrey Rahmatullin wrote: Control: tags -1 + fixed-upstream On Sat, Aug 30, 2014 at 01:50:06PM -0700, Lucas Nussbaum wrote:

Bug#759929: shouldn't libhdf5.so still be avail and managed via alternatives

2014-08-31 Thread Yaroslav Halchenko
On Sun, 31 Aug 2014, Julien Cristau wrote: On Sat, Aug 30, 2014 at 20:17:23 -0400, Yaroslav Halchenko wrote: both ants and nifti2dicom (and probably others) recent FTBFS are due to recentish upload of hdf5 1.8.13+docs-8 which was previously only in experimental after its big RF

Bug#757289: stimfit: Please update to use wxwidgets3.0

2014-08-30 Thread Yaroslav Halchenko
Awesome. If Yaro's unable to sponsor it in a timely fashion, feel free to ping me. building now... will upload later if everything is smooth Thanks Olly for staying guard! Cheers -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research

Bug#759929: ants: FTBFS

2014-08-30 Thread Yaroslav Halchenko
smells to me as some gcc crash: /usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/ants-2.1.0~rc2+git3-g9103999/obj-x86_64-linux-gnu/CMakeFiles 28 29 [ 4%] Built target antsUtilities make[3]: Leaving directory '/«BUILDDIR»/ants-2.1.0~rc2+git3-g9103999/obj-x86_64-linux-gnu' make[2]: *** [all]

Bug#759929: ants: FTBFS

2014-08-30 Thread Yaroslav Halchenko
jobs burried on top... will fix for that cheers On Sat, 30 Aug 2014, Yaroslav Halchenko wrote: smells to me as some gcc crash: /usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/ants-2.1.0~rc2+git3-g9103999/obj-x86_64-linux-gnu/CMakeFiles 28 29 [ 4%] Built target antsUtilities make

Bug#757289: stimfit: Please update to use wxwidgets3.0

2014-08-30 Thread Yaroslav Halchenko
uploading as is, but because you didn't take the route of alternatives, all backport builds are no longer good On Sat, 30 Aug 2014, Olly Betts wrote: Control: tags -1 + pending On Sat, Aug 30, 2014 at 05:02:46PM +0100, Christoph Schmidt-Hieber wrote: @Yaro: stimfit 0.13.19, addressing this

Bug#759929: shouldn't libhdf5.so still be avail and managed via alternatives

2014-08-30 Thread Yaroslav Halchenko
-linux-gnu/libhdf*.so* managed via alternatives, e.g. like blas/atlas do it? On Sat, 30 Aug 2014, Yaroslav Halchenko wrote: taking my words back -- it was a /usr/bin/cmake -E cmake_progress_report /«BUILDDIR»/ants-2.1.0~rc2+git3-g9103999/obj-x86_64-linux-gnu/CMakeFiles make[4]: *** No rule

Bug#759490: tests are actually not excercised for the package at build time

2014-08-27 Thread Yaroslav Halchenko
Package: python-six Version: 1.7.3-1~bpo70+1 Severity: normal seems to be the case also in sid: ,--- | I: pybuild base:170: /usr/bin/python setup.py build | running build | running build_py | copying six.py - /tmp/buildd/six-1.7.3/.pybuild/pythonX.Y_2.7/build | I: pybuild base:170:

Bug#757246: please export configuration options which were used to build xorg server

2014-08-25 Thread Yaroslav Halchenko
On Mon, 25 Aug 2014, Julien Cristau wrote: + # save the configure flags so that packages like vnc, tightvnc, tigervnc + # know how the package was built. + ( \ + echo 'xserver_confflags = $(confflags)'; \ + echo 'xserver_confflags_main = $(confflags_main)'; \ + echo

Bug#604093: Bug #604093: python-debian: iter_paragraphs: be more robust against RFC822 comments in unicoded files -- swallows the trailer

2014-08-25 Thread Yaroslav Halchenko
On Mon, 25 Aug 2014, John Wright wrote: Hi Stuart (and pkg-python-debian-maint): On Tue, Jul 29, 2014 at 11:31:31PM +1000, Stuart Prescott wrote: The only place where comments are defined in deb822 files that I can find is in policy §5.1 and they are only defined for

Bug#758593: 'git annex get --link' to hardlink keys instead of copying them when getting from local clones

2014-08-21 Thread Yaroslav Halchenko
On Tue, 19 Aug 2014, Joey Hess wrote: Yaroslav Halchenko wrote: yeap -- sounds like a good analysis/concerns, hinting once again to make it optional thus maintaining original integrity and solely allowing linked storage as user's choice -- for the throw-away clones (per my use case

Bug#758719: a window (gkrellm, xfce4-pannel) jumps up when changing resolution (up)

2014-08-20 Thread Yaroslav Halchenko
Package: awesome Version: 3.5.5-1 Severity: normal It finally annoyed be enough to start whining ;) whenever I switch display (pure xrandr call) from laptop's LVDS (1600x900) to external display (1920x1200) gkrellm and xfce4-pannel, while maintaining horizontal position, jump up so their bottoms

Bug#758593: 'git annex get --link' to hardlink keys instead of copying them when getting from local clones

2014-08-19 Thread Yaroslav Halchenko
On Tue, 19 Aug 2014, Joey Hess wrote: Yaroslav Halchenko wrote: Original motivation was expressed here: https://github.com/data-git/datagit/issues/1 Through-away limited-view (i.e. some keys not present) could be useful e.g. to test for correct operation of a given data analysis

Bug#758592: make 'git annex CMD --help' spit out help even outside of annexed repo

2014-08-18 Thread Yaroslav Halchenko
Package: git-annex Version: 5.20140817 Severity: wishlist ATM $ git annex get --help git-annex: Not in a git repository. $ git annex mirror --help git-annex: Not in a git repository. -- System Information: Debian Release: jessie/sid APT prefers testing APT policy: (900, 'testing'), (600,

Bug#758593: 'git annex get --link' to hardlink keys instead of copying them when getting from local clones

2014-08-18 Thread Yaroslav Halchenko
Package: git-annex Version: 5.20140817 Severity: wishlist Original motivation was expressed here: https://github.com/data-git/datagit/issues/1 Through-away limited-view (i.e. some keys not present) could be useful e.g. to test for correct operation of a given data analysis pipeline given a

Bug#758594: git-annex: unrecognized option `--help'

2014-08-18 Thread Yaroslav Halchenko
Package: git-annex Version: 5.20140817 Severity: wishlist even though claims to be unrecognized, spits out help: $ git annex get --help git-annex: unrecognized option `--help' Usage: git-annex get [PATH ...] [option ...] -f REMOTE --from=REMOTE source remote -A --all

Bug#758595: include `--fast` option into output of addurl/importfeed --help

2014-08-18 Thread Yaroslav Halchenko
Package: git-annex Version: 5.20140817 Severity: wishlist ATM $ git annex importfeed --help git-annex: unrecognized option `--help' Usage: git-annex importfeed URL ... [option ...] --template=FORMAT template for filenames --relaxed skip size check To see additional options

Bug#758236: init.d-script-does-not-implement-required-option false positives with new /etc/init.d/skeleton

2014-08-15 Thread Yaroslav Halchenko
Package: lintian Version: 2.5.25 Severity: normal File: /usr/share/lintian/checks/init.d.pm New skeleton allows for concise definition of init files through offloading all the logic to /lib/init/init-d-script which implements necessary options, which are now not defined in the script itself.

Bug#758240: --failed results in TypeError: 'NoneType' object is not iterable

2014-08-15 Thread Yaroslav Halchenko
Package: python-nose Version: 1.3.3-2 Severity: normal previously ran just with --with-id, then fails if given --failed: $ /usr/bin/nosetests -s -v --failed datagit/tests/ Traceback (most recent call last): File /usr/bin/nosetests, line 9, in module load_entry_point('nose==1.3.3',

Bug#739898: python-git: untracked_files no longer detected

2014-08-15 Thread Yaroslav Halchenko
Package: python-git Version: 0.3.2~RC1-3 Followup-For: Bug #739898 I am thinking about updating this package to current state of Git master from upstream. I have asked about possible RC2 but haven't got response so far: https://github.com/gitpython-developers/GitPython/issues/164 I would also

Bug#758116: tasksel: Allow to select Blends selection during installation - just DE, Web server, Mail server is NOT enough

2014-08-14 Thread Yaroslav Halchenko
On Thu, 14 Aug 2014, Andreas Tille wrote: IMHO it would do a nice service to our users to promote these topics on our installers at the time when tasks will be selected. +100 -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research

Bug#757763: the proposed fix solves the issue

2014-08-12 Thread Yaroslav Halchenko
On Tue, 12 Aug 2014, luc wrote: Hi, Adding the journalmatch statement in an [Init] section indeed did work. Some hosts were properly banned during the night as per jail configuration. One remaining issue concerns the mail notyfying about the ban. My jail.d/jail.local is configured with:

Bug#755073: [Pkg-tigervnc-devel] Bug#755073: [CTTE #717076] Default libjpeg implementation in Debian

2014-08-11 Thread Yaroslav Halchenko
On Mon, 11 Aug 2014, Thorsten Glaser wrote: On Thu, 31 Jul 2014, Don Armstrong wrote: 11. The prospective libjpeg-turbo maintainer should propose an appropriate Who *is/are* the maintainer(s), anyway? $ apt-cache show libturbojpeg1-dev | grep Maintainer Maintainer: Debian

Bug#757763: fail2ban: postfix-sasl jail (and probably regular postfix too) doesn't ban on systemd-enabled

2014-08-11 Thread Yaroslav Halchenko
Hi Luc, Thanks for trying 0.9.x out. Indeed, journalmatch is still missing for the majority of the filters and your contributions would be very welcome -- I am myself yet to deploy any systemd box/virtualbox for testing/using systemd -- so I do not even have any sample log files to adjust

Bug#757842: new version (= 1.8) is available and required for scrapy testing

2014-08-11 Thread Yaroslav Halchenko
Package: python-w3lib Version: 1.5-1 Severity: wishlist thanks in advance for updating the package! -- System Information: Debian Release: jessie/sid APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'), (300, 'experimental') Architecture: amd64 (x86_64) Foreign Architectures:

Bug#757843: please enable build-time unit-testing

2014-08-11 Thread Yaroslav Halchenko
Package: python-scrapy Version: 0.24.2-1 Severity: wishlist it should help to guarantee correct operation using system-wide available versions of dependencees. Also it would help to install all necessary packages (from Debian) for testing of scrapy (via apt-get build-dep). Thanks in advance!

Bug#757483: allow to strip leading directories (similar to --strip-components of tar) upon extract

2014-08-08 Thread Yaroslav Halchenko
Package: patool Version: 1.7-1 Severity: wishlist usecase: overlaying of sources from .orig.tar.* archives of Debian packages. -- System Information: Debian Release: jessie/sid APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'), (300, 'experimental') Architecture: amd64

Bug#650394: updated packages available

2014-08-07 Thread Yaroslav Halchenko
On Thu, 07 Aug 2014, Brian Hinz wrote: On Wed, Aug 6, 2014 at 10:50 AM, Yaroslav Halchenko [1]deb...@onerussian.com wrote: - I see that there is some packaging available in upstream sources now,   done by Brian (CCed).  Brian -- would you be interested to join our

Bug#756699: stimfit: [hdf5 transition] please support hdf5 1.8.13 new packaging layout

2014-08-06 Thread Yaroslav Halchenko
It was uploaded earlier today. Thanks! On August 4, 2014 2:46:50 PM EDT, Christoph Schmidt-Hieber chris...@gmx.de wrote: Dear Yaroslav, I've uploaded a new version of Stimfit to debian mentors that should hopefully fix bug #756699: https://mentors.debian.net/package/stimfit As the bug is

Bug#650394: updated packages available

2014-08-06 Thread Yaroslav Halchenko
On Wed, 06 Aug 2014, Matthias Klose wrote: now the package has an ITP again, without many action. I did update the packaging, and built it here: https://launchpad.net/~doko/+archive/ubuntu/toolchain/+sourcepub/4325100/+listing-archive-extra final package currently in

Bug#650394: [Pkg-tigervnc-devel] Bug#650394: updated packages available

2014-08-06 Thread Yaroslav Halchenko
would you also mind to clarify the origin of patches under debian/patchdir/f/ ? for now I have pushed all that stuff (with just changelog and gbp.conf adjusted and watch file added) into our GIT. On Wed, 06 Aug 2014, Matthias Klose wrote: now the package has an ITP again, without many action.

Bug#650394: [Pkg-tigervnc-devel] updated packages available

2014-08-06 Thread Yaroslav Halchenko
On Wed, 06 Aug 2014, Yaroslav Halchenko wrote: - debian/rules has include /usr/share/xserver-xorg/configure_flags.mk now -- but where that file supposed to come from? can't locate it... my quick discussions on IRC I believe didn't finalize in shipping that one along within xorg

Bug#757246: please export configuration options which were used to build xorg server

2014-08-06 Thread Yaroslav Halchenko
Package: xserver-xorg-dev Version: 2:1.16.0-1 Severity: wishlist Tags: patch Although just a wishlist, it is a blocker for #650394 -- the TigerVNC ITP. To build it (properly/reliably) we would need access to original flags used to configure xorg server (per each architecture). Once I had a

Bug#757183: Newer upstream release (1.2.1) should fix my problem(s) ;-)

2014-08-05 Thread Yaroslav Halchenko
Package: docker.io Version: 1.0.0~dfsg1-1 Severity: normal ran into $ docker.io run -i -t -v $PWD:/tmp/tests debian:wheezy /bin/bash 2014/08/06 02:43:34 finalize namespace drop capabilities read /proc/1/status: bad file descriptor googled it up to be fixed in 1.1.2:

Bug#757183: Newer upstream release (1.2.1) should fix my problem(s) ;-)

2014-08-05 Thread Yaroslav Halchenko
On Tue, 05 Aug 2014, Tianon Gravi wrote: retitle 757183 Please package 1.1.2 upstream release severity 757183 important block 757183 by 757024 thanks On 5 August 2014 20:51, Yaroslav Halchenko deb...@onerussian.com wrote: $ docker.io run -i -t -v $PWD:/tmp/tests debian:wheezy /bin/bash

Bug#757024: Bug#757183: Newer upstream release (1.2.1) should fix my problem(s) ;-)

2014-08-05 Thread Yaroslav Halchenko
On Tue, 05 Aug 2014, Tianon Gravi wrote: FWIW, if they are still so co-dependent, might be worth just to carry a multi-tarball source package and build both within the same source package until libcontainer would become more independent? Yeah, I think that's what Paul's thinking, but

Bug#756214: libvw0: Stale package

2014-08-03 Thread Yaroslav Halchenko
On Sun, 03 Aug 2014, Dirk Eddelbuettel wrote: | I would be delighted to share my very limited wisdom about | git-buildpackage in hangout or any other media. where are you now? ( I | am in EST (EDT to be more precise) time zone which is GMT-4 atm. I am in Chicago, so one time zone over. [

Bug#734634: [Pkg-freeipmi-devel] Bug#734634: Updated to 1.4.4

2014-08-01 Thread Yaroslav Halchenko
Awesome! I can't review atm (away from laptop), but indeed you could just join the team on alioth https://alioth.debian.org/projects/pkg-freeipmi/ and should be able to push directly (or just push somewhere eg on github and I would fetch from there) On August 1, 2014 9:43:22 AM EDT, Tollef Fog

Bug#734634: [Pkg-freeipmi-devel] Bug#734634: Bug#734634: Updated to 1.4.4

2014-08-01 Thread Yaroslav Halchenko
Please gimme a day or two first, May be I would be useful too :-) On August 1, 2014 10:27:56 AM EDT, Tollef Fog Heen tfh...@err.no wrote: ]] Yaroslav Halchenko Hi, Awesome! I can't review atm (away from laptop), but indeed you could just join the team on alioth https://alioth.debian.org

Bug#756214: libvw0: Stale package

2014-07-30 Thread Yaroslav Halchenko
On Wed, 30 Jul 2014, Dirk Eddelbuettel wrote: On 28 July 2014 at 00:39, Yaroslav Halchenko wrote: | On Sun, 27 Jul 2014, Dirk Eddelbuettel wrote: | How much does rest differ in the debian/ branch, apart from there being a | debian directory? | should nohow differ -- classical git

Bug#604093: Bug #604093: python-debian: iter_paragraphs: be more robust against RFC822 comments in unicoded files -- swallows the trailer

2014-07-29 Thread Yaroslav Halchenko
On Tue, 29 Jul 2014, Stuart Prescott wrote: but if deb822 is not derived from rfc822, I guess my report was a moot ;) I can see where you're coming from here. Our definition of the format is Policy §5.1, which doesn't actually mention RFC822, defines some things that are not in that RFC

Bug#710302: neurosynth: changing back from ITP to RFP

2014-07-28 Thread Yaroslav Halchenko
retitle 710302 ITP: neurosynth -- Large-scale synthesis of functional neuroimaging data owner 710302 t...@neuro.debian.net tag 710302 - pending thanks packages are somewhat ready http://neuro.debian.net/pkgs/python-neurosynth.html http://neuro.debian.net/pkgs/neurosynth-dataset.html and still

Bug#604093: Bug #604093: python-debian: iter_paragraphs: be more robust against RFC822 comments in unicoded files -- swallows the trailer

2014-07-28 Thread Yaroslav Halchenko
Hi Stuart, Thank you for getting back to this issue: On Tue, 29 Jul 2014, Stuart Prescott wrote: A while ago, you reported a bug against python-debian's handling of comments in deb822. In that bug, the following input was used to illustrate the problem: $ cat confuse.txt Goodone:

Bug#756214: libvw0: Stale package

2014-07-27 Thread Yaroslav Halchenko
Hi Dirk, at some point I have started updating the package, but haven't finished... if you have a moment -- I would really appreciate, especially since now you are exercising use cases I do not yet have myself ;-) Myself -- can't guarantee when I get back to vw package to update/fix it up. I

Bug#756214: libvw0: Stale package

2014-07-27 Thread Yaroslav Halchenko
On Sun, 27 Jul 2014, Dirk Eddelbuettel wrote: Howdy, On 27 July 2014 at 22:04, Yaroslav Halchenko wrote: | Hi Dirk, | at some point I have started updating the package, but haven't finished... if | you have a moment -- I would really appreciate, especially since now you

Bug#755173: fail2ban: imaps connections are ignored

2014-07-25 Thread Yaroslav Halchenko
On Fri, 18 Jul 2014, Pressy wrote: actual i can't seemed to reproduce the authentication failure - type message. I'm not sure if this caused by my ldap-backend for user authentication. For all the different failure message that cyrus/imaps, I also use a more complex failregex.

Bug#755173: fail2ban: imaps connections are ignored

2014-07-18 Thread Yaroslav Halchenko
On Fri, 18 Jul 2014, pressy wrote: Package: fail2ban Version: 0.8.6-3wheezy3 Severity: normal Dear Maintainer, with the last update on cyrus-imap.conf secure connections (imaps) are ignored. Changing the daemon line from: _daemon = (?:cyrus/)?(?:imapd?|pop3d?) to: _daemon =

Bug#755195: segmentation fault Tcl_DeleteHashEntry (entryPtr=0x1dd9bd0) at /tmp/buildd/tcl8.6-8.6.1/generic/tclHash.c:449

2014-07-18 Thread Yaroslav Halchenko
Package: libtcl8.6 Version: 8.6.1-6 Severity: important File: /usr/lib/x86_64-linux-gnu/libtcl8.6.so While trying to rebuild python-seaborn package (in a clean chroot on another box) I ran into the segfault causing build to fail. Here are the details from a gdb for that run. Please let me know

Bug#755195: [Pkg-tcltk-devel] Bug#755195: segmentation fault Tcl_DeleteHashEntry (entryPtr=0x1dd9bd0) at /tmp/buildd/tcl8.6-8.6.1/generic/tclHash.c:449

2014-07-18 Thread Yaroslav Halchenko
procPtr = optimized out (More stack frames follow...) On Fri, 18 Jul 2014, Sergei Golovan wrote: reassign 755195 libtk8.6 8.6.1-5 thanks Hi Yaroslav, On Fri, Jul 18, 2014 at 9:47 PM, Yaroslav Halchenko deb...@onerussian.com wrote: (gdb) bt #0 Tcl_DeleteHashEntry (entryPtr=0x1dd9bd0

Bug#755195: closed by Sergei Golovan sgolo...@debian.org (Bug#755195: fixed in tk8.6 8.6.1-6)

2014-07-18 Thread Yaroslav Halchenko
wow -- thank you Sergei for such a quick resolution! I will check it out tomorrow whenever new version becomes available. On Fri, 18 Jul 2014, Debian Bug Tracking System wrote: This is an automatic notification regarding your Bug report which was filed against the libtk8.6 package: #755195:

Bug#735994: Bug#736035: Bug#735994: upgrading to serious: libtiff4-dev is being removed

2014-07-17 Thread Yaroslav Halchenko
(since currently technically there is nothing wrong with it!) On Tue, 01 Jul 2014, Yaroslav Halchenko wrote: On Tue, 01 Jul 2014, Yaroslav Halchenko wrote: No, it's not fine. Buildds only consider the first alternative, so if libtiff4-dev no longer exists, the package won't be able

Bug#735994: Bug#736035: Bug#735994: upgrading to serious: libtiff4-dev is being removed

2014-07-17 Thread Yaroslav Halchenko
On Thu, 17 Jul 2014, Jay Berkenbilt wrote: so when is this transition to use libtiff-dev to happen? cmtk just was removed from jessie for no good reason (I have not spotted that severity still was serious), so I wondered if I should just wait a bit and upload updated package or start

Bug#735994: Bug#736035: Bug#735994: upgrading to serious: libtiff4-dev is being removed

2014-07-17 Thread Yaroslav Halchenko
On Thu, 17 Jul 2014, Yaroslav Halchenko wrote: Let me know if I can be of any assistance in some way other than reintroducing libtiff4-dev. doh -- blind/silly/busy? me, there is already a libtiff5-dev and what I need is actually to adjust build-depends to bdepend on it -- I took

Bug#734634: [Pkg-freeipmi-devel] Bug#734634: Some work in Ubuntu

2014-07-14 Thread Yaroslav Halchenko
Would you be interested just to join the FreeIPMI maintenance team within Debian and help updating packaging for fresh FreeIPMI release (1.4.4): https://alioth.debian.org/projects/pkg-freeipmi/ ? On Wed, 09 Apr 2014, Robie Basak wrote: Hi, I looked at bringing this into Ubuntu ahead of Debian

Bug#734634: freeipmi: new upstream version 1.3.4

2014-07-14 Thread Yaroslav Halchenko
Hi Sergei, Sorry that we have missed your pull request. On Sat, 25 Jan 2014, Sergei Ianovich wrote: Please test https://github.com/yanovich/freeipmi-debian.git Repackaged v1.3.4 with a minor bugfix. I've tried to be consistent with the existing policies. I have just pushed to alioth the

Bug#754716: uninstallable and FTBFS on hurd-i386

2014-07-13 Thread Yaroslav Halchenko
Package: inkscape Version: 0.48.4-5+b1 Severity: serious Justification: fails to build from source (but built successfully in the past) because FTBFS it also became uninstallable (without +b1 rebuild) since libpoppler44 was removed already from sid so all those which need inkscape in their

Bug#733517: python-cffi Re: [Python-modules-team] Bug#733517: FTBFS on Sparc and S390x

2014-07-07 Thread Yaroslav Halchenko
On Sat, 05 Jul 2014, Vincent Bernat wrote: ❦ 4 mai 2014 09:15 +0200, Vincent Bernat ber...@debian.org : There is another problem on sparc that makes the build fail but it succeeds on s390x. I still have to figure out the remaining bug on sparc but it seems quite complex (and related to

Bug#735994: Bug#736035: Bug#735994: upgrading to serious: libtiff4-dev is being removed

2014-07-01 Thread Yaroslav Halchenko
reopen 735994 reopen 736035 thanks On Tue, 01 Jul 2014, Sebastian Ramacher wrote: Yeah, I think that should be fine. Sorry about that -- my script to find all affected packages just looked for build dependencies on libtiff4-dev. I didn't think to filter out the case where it was an

Bug#735994: Bug#736035: Bug#735994: upgrading to serious: libtiff4-dev is being removed

2014-07-01 Thread Yaroslav Halchenko
On Tue, 01 Jul 2014, Yaroslav Halchenko wrote: No, it's not fine. Buildds only consider the first alternative, so if libtiff4-dev no longer exists, the package won't be able to build on the buildds. and with your argument reopening those just closed issues ;) but for now with normal

Bug#735994: upgrading to serious: libtiff4-dev is being removed

2014-06-30 Thread Yaroslav Halchenko
On Sun, 29 Jun 2014, Jay Berkenbilt wrote: Control: severity 735994 serious libtiff4-dev is now being removed, which will leave your package unable to built from source. are you sure Jay? ;) From the beginning it had build-depends on libtiff4-dev | libtiff-dev So I do not think there

Bug#736035: please build-depend on libtiff-dev, not libtiff4-dev

2014-06-30 Thread Yaroslav Halchenko
The same (as with cmtk) here -- I have bdepends on libtiff4-dev | libtiff-dev On Sat, 18 Jan 2014, Jay Berkenbilt wrote: Source: openmeeg Version: 2.0.0.dfsg-5.1 User: q...@debian.org Usertags: libtiff4-dev The libtiff4-dev package is a transitional package that is going to disappear

Bug#753243: [Python-apps-team] Bug#753243: mypaint: FTBFS: ImportError: cannot import name _tkagg

2014-06-29 Thread Yaroslav Halchenko
This is just yet another reincarnation of #750630. Please merge into On Sun, 29 Jun 2014, David Suárez wrote: Source: mypaint Version: 1.1.0-3 Severity: serious Tags: jessie sid User: debian...@lists.debian.org Usertags: qa-ftbfs-20140628 qa-ftbfs Justification: FTBFS on amd64 Hi,

Bug#753075: ability to diff with previous state

2014-06-28 Thread Yaroslav Halchenko
Package: baobab Version: 3.12.1-1 Severity: wishlist I would really appreciate if you channel upstream: I often use baobab to see what sucks out my precious SSD space. Going through all directories upon each occasion is not very productive. If I could simply clieck save state and then upon

Bug#737443: [src:nipype] Sourceless file (minified)

2014-06-27 Thread Yaroslav Halchenko
Forwarded: https://github.com/nipy/nipype/issues/869 -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,Psychological and Brain Sciences Dept. Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755

Bug#734810: I would also appreciate some update/resolution on systemd in docker.io container

2014-06-25 Thread Yaroslav Halchenko
I was about to try it but then ran into this issue so decided not to sweat before knowing it would work ;) Could someone update? Thanks in advance -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,Psychological

Bug#752737: ITP: patchclamp -- basic tool for patch clamping physiology recordings

2014-06-25 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko deb...@onerussian.com * Package name: patchclamp Version : 1.0 Upstream Author : Vadim Alexeenko v.a.alexee...@gmail.com * URL : http://patchclamp.net * License : GPL Programming Lang: C

Bug#698392: FWIW -- experiencing the same while booting off the installation USB stick (through loopback to .iso) with wheezy 7.5

2014-06-18 Thread Yaroslav Halchenko
FWIW: I was trying to install wheezy amd64 using http://ftp.debian.org/debian/dists/wheezy/main/installer-amd64/current/images/netboot/mini.iso which was booted into using grub menu record such as (mentally replace those variables with the path to the iso on the stick ;) ) menuentry Debian Stable

Bug#689230: virtuoso 7.1 to Debian proper [Was: Bug#689230: new version is needed!]

2014-06-16 Thread Yaroslav Halchenko
On Mon, 16 Jun 2014, Tim Haynes wrote: We are looking to get virtuoso updated in Debian.  I was referred to [2]http://wiki.lod2.eu/display/LOD2DOC/Installation+of+a+local+LOD2+stack as an alternative source and I see that you have done some work to update package

Bug#689230: virtuoso 7.1 to Debian proper [Was: Bug#689230: new version is needed!]

2014-06-16 Thread Yaroslav Halchenko
On Mon, 16 Jun 2014, Lisandro Damián Nicanor Pérez Meyer wrote: Hi Tim, We are looking to get virtuoso updated in Debian. I was referred to http://wiki.lod2.eu/display/LOD2DOC/Installation+of+a+local+LOD2+stack as an alternative source and I see that you have done some work to update

Bug#689230: virtuoso 7.1 to Debian proper [Was: Bug#689230: new version is needed!]

2014-06-16 Thread Yaroslav Halchenko
On Mon, 16 Jun 2014, Lisandro Damián Nicanor Pérez Meyer wrote: do you see obvious warning points to keep in mind? there seems to be not that many dependents on virtuoso's components, or am I misunderstanding? I don't remember virtuoso's internals, but for example the binaries can not

Bug#689230: virtuoso 7.1 to Debian proper [Was: Bug#689230: new version is needed!]

2014-06-16 Thread Yaroslav Halchenko
On Mon, 16 Jun 2014, Sune Vuorela wrote: On Monday 16 June 2014 12:20:24 Yaroslav Halchenko wrote: Do you see any dependent packages present in Debian which require those binaries and would not be compatible somehow with 8.1? The entire KDE stack needs the exact current version

Bug#689230: virtuoso 7.1 to Debian proper [Was: Bug#689230: new version is needed!]

2014-06-16 Thread Yaroslav Halchenko
On Mon, 16 Jun 2014, Sune Vuorela wrote: Great -- thanks Sune for the feedback. It is just from previous comments I was not sure if KDE is still relying/using virtuoso. But if you state so -- must be so. There is a move away from virtuoso - but the kde stack in stable uses virtuoso and

Bug#751555: respect http{,s}_proxy env variables

2014-06-14 Thread Yaroslav Halchenko
Package: maven-debian-helper Version: 1.6.7 Severity: wishlist File: /usr/bin/mvn Those are respected by many environments/libraries/tools in Debian and handy to force/block network access (e.g. to validate pkg building be sufficient without network connection). Maven has its own (XML) means to

Bug#689230: virtuoso 7.1 to Debian proper [Was: Bug#689230: new version is needed!]

2014-06-13 Thread Yaroslav Halchenko
Hi Tim, We are looking to get virtuoso updated in Debian. I was referred to http://wiki.lod2.eu/display/LOD2DOC/Installation+of+a+local+LOD2+stack as an alternative source and I see that you have done some work to update package (from Ubuntu) for the 7.1 release. Since you had some experience

Bug#689230: new version is needed!

2014-06-10 Thread Yaroslav Halchenko
Debian is about to freeze in a few months, and we would need to have a recent release available for some NeuroDebian related projects. It would be great if 7.1.0 gets into jessie. If there is anything we could help with -- please let us know. -- Yaroslav O. Halchenko, Ph.D.

Bug#750661: uninstallable

2014-06-05 Thread Yaroslav Halchenko
Source: linux-headers-3.15-rc7-amd64 Version: 3.15~rc7-1~exp1 Severity: grave seems to depend on absent linux-kbuild-3.15 $ sudo apt-get install linux-headers-3.15-rc7-amd64 Reading package lists... Done Building dependency tree Reading state information... Done Some packages could

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