Bug#786897: pyglet 1.2 was finally released

2015-05-26 Thread Yaroslav Halchenko
Package: python-pyglet Version: 1.1.4.dfsg-2 Severity: normal Due to the age of 1.1.4 (from 2010) I am marking this as normal. 1.2 was released this Feb and we should upgrade unstable to it soonish! -- System Information: Debian Release: 8.0 APT prefers testing APT policy: (900,

Bug#786448: [ITR] templates://neurodebian/{neurodebian.templates}

2015-05-26 Thread Yaroslav Halchenko
Sure - go ahead with the review. Thank you ask guys for your work! On May 26, 2015 12:48:39 AM EDT, Christian PERRIER bubu...@debian.org wrote: Dear Debian maintainer, The Debian internationalisation team and the Debian English localisation team will soon begin the review of the debconf

Bug#770631: statsmodels: Build-Depends on nodejs not satisfiable on some architectures

2015-05-13 Thread Yaroslav Halchenko
Thank you Edmund. If you are a DD feel welcome to upload an NMU with such a workaround for now. Otherwise I will look into it next week (traveling/busy atm) to simply not build docs at all whenever only binary-arch build ahs thus removing those from straight build depends altogether. Cheers On

Bug#541637: I think I have ran into it as well

2015-05-07 Thread Yaroslav Halchenko
Today, that is 6 years after initial report ;) here are the detail when running with git from current master v2.4.0-53-g8440f74 Starting program: /home/yoh/proj/misc/git/git push origin master [Thread debugging using libthread_db enabled] Using host libthread_db library

Bug#784697: nib-ls has python3 shebang while comes from python2 package

2015-05-07 Thread Yaroslav Halchenko
Package: python-nibabel Version: 1.3.0-2 Severity: normal Detected on a wheezy backport -- System Information: Debian Release: 8.0 APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'), (300, 'experimental') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel:

Bug#782963: Please provide a python3 module

2015-04-19 Thread Yaroslav Halchenko
Help indeed would be appreciated On April 19, 2015 3:06:26 PM EDT, Paul Tagliamonte paul...@debian.org wrote: Package: statsmodels Severity: wishlist User: py3porters-de...@lists.alioth.debian.org Usertags: patchme-python3 thanks Hello there! This package contains a trove classifier[1] in its

Bug#781606: provide a shortcut/option to drop into shell in current directory

2015-04-05 Thread Yaroslav Halchenko
On Sun, 05 Apr 2015, Yoran Heling wrote: Oh? Are Debian bug reports automatically forwarded to me now? Sweet! ;) nah -- I think I have explicitly CCed to you. BUT you can subscribe to the bug reports on https://packages.qa.debian.org/n/ncdu.html (lower left corner) On 2015-03-31, Yaroslav

Bug#781606: provide a shortcut/option to drop into shell in current directory

2015-03-31 Thread Yaroslav Halchenko
Package: ncdu Version: 1.10-1 Severity: wishlist ncdu is way nice -- thanks Yoran! (ditching baobab now ;) ) one immediate use case I ran into is ability to run shell in a directory I am currently in within ncdu (e.g. to run git clean -dfx). It would be nice if there was an option which would

Bug#775771: Bug#781203: cmdline API breakage -- E: Command line option --installed is not understood

2015-03-26 Thread Yaroslav Halchenko
On Thu, 26 Mar 2015, David Kalnischkies wrote: On Wed, Mar 25, 2015 at 08:04:24PM -0400, Yaroslav Halchenko wrote: I just have discovered that our scripts broke on jessie because of now --installed apparently is not supported, although still referred to in the manpage and changelog

Bug#546527: is it resolved? [rxvt-unicode-ml: Menus grab pointer and lock X11]

2015-03-26 Thread Yaroslav Halchenko
Was the bug resolved? version assignment was removed but no comments/closed statement issued -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,Psychological and Brain Sciences Dept. Dartmouth College, 419 Moore

Bug#781203: cmdline API breakage -- E: Command line option --installed is not understood

2015-03-25 Thread Yaroslav Halchenko
Package: apt Version: 1.0.9.7 Severity: important File: /usr/bin/apt-cache I just have discovered that our scripts broke on jessie because of now --installed apparently is not supported, although still referred to in the manpage and changelog doesn't point to any deprecation. So I just assume

Bug#771549: fail2ban: init script refuses to start after a crash

2015-03-21 Thread Yaroslav Halchenko
On Sat, 21 Mar 2015, Marc F. Clemente wrote: Thanks to the package maintainer, version 0.9.1+git44-gd65c4f8-1 of fail2ban is available in the experimental repository. I have tried this a few days on a few different computers, and I have not had an issue with segfaults in sqlite3. Others

Bug#779847: please ship baseline_images (currently matplotlib.testing.decorators is not importable)

2015-03-05 Thread Yaroslav Halchenko
Package: python-matplotlib Version: 1.4.2-3.1 Severity: normal $ python -c 'import matplotlib.testing.decorators' Traceback (most recent call last): File string, line 1, in module File /usr/lib/python2.7/dist-packages/matplotlib/testing/decorators.py, line 17, in module import

Bug#779847: Acknowledgement (please ship baseline_images (currently matplotlib.testing.decorators is not importable))

2015-03-05 Thread Yaroslav Halchenko
or at least don't fail the import itself -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,Psychological and Brain Sciences Dept. Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1

Bug#779810: /usr/bin/funccount: line 110: function_profile_enabled: Permission denied

2015-03-04 Thread Yaroslav Halchenko
Package: perf-tools-unstable Version: 0.0.1~20140723+git942be0b-4 Severity: important File: /usr/bin/funccount root@xxx:/tmp# funccount 'bio_*' Tracing bio_*... Ctrl-C to end. /usr/bin/funccount: line 110: function_profile_enabled: Permission denied ERROR: enabling function profiling. Exiting.

Bug#779035: Upstream is up to 4.1.0

2015-02-28 Thread Yaroslav Halchenko
Package: python-tornado Version: 3.2.2-1.1 Followup-For: Bug #779035 Fresh version of ipython 3.0 will require tornado = 4.0 so fresh version would be well appreciated! thanks! -- System Information: Debian Release: 8.0 APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'),

Bug#779472: RFP: python-mistune -- markdown parser in pure Python with renderer feature

2015-02-28 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist * Package name: python-mistune Version : 0.5.0 Upstream Author : Hsiaoming Yang m...@lepture.com * URL : http://mistune.readthedocs.org/en/latest/ * License : BSD-3 Programming Lang: Python Description : markdown parser

Bug#778269: packaging for mkdocs -- vcs?

2015-02-20 Thread Yaroslav Halchenko
Hi Brian, thanks for working on packaging mkdocs. I wondered if I could fetch current state of packaging from somewhere (sorry if I have missed it in the report) -- wanted to give it a try. -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org

Bug#775619: seaborn: FTBFS in jessie: Tests failures

2015-02-20 Thread Yaroslav Halchenko
On Fri, 20 Feb 2015, Mehdi Dogguy wrote: What is the impact of disabling statsmodels 0.6 features in seaborn? Also, AFAICS, the runtime error is not catched, so I guess the program will just kill itself? not kill but throw an exception, and quite an informative one ;) Why not just setting

Bug#775619: seaborn: FTBFS in jessie: Tests failures

2015-02-19 Thread Yaroslav Halchenko
On Thu, 19 Feb 2015, Mehdi Dogguy wrote: Yeah Stuart, thank you for the analysis... I even tried to figure out shim for compatibility but gave up and decided to let it die off from jessie encouraging people just to fetch recent one from NeuroDebian alongside with more recent statsmodels.

Bug#775619: seaborn: FTBFS in jessie: Tests failures

2015-02-19 Thread Yaroslav Halchenko
tags -1 pending On Thu, 19 Feb 2015, Yaroslav Halchenko wrote: Any news? Should we add a removal hint for seaborn? Since you haven't removed yet -- gimme please few more days, I will fix it up for jessie I have just uploaded -3 with fixes for mentioned FTBFS and few others which could

Bug#778706: flooding log with Not implemented reached in virtual void extensions::DisplayInfoProviderAura::UpdateDisplayUnitInfoForPlatform

2015-02-18 Thread Yaroslav Halchenko
Package: chromium Version: 40.0.2214.111-1 Severity: important Tags: upstream I have initially used jessie's version and observed the flood of such messages (cited below). Upstream is aware of it and I believe had it fixed recentish: https://code.google.com/p/chromium/issues/detail?id=442326 by

Bug#775619: seaborn: FTBFS in jessie: Tests failures

2015-02-15 Thread Yaroslav Halchenko
On Mon, 19 Jan 2015 00:31:40 +1100 Stuart Prescott stu...@debian.org wrote: Control: tag -1 confirmed Relevant part (hopefully): File /usr/lib/python2.7/dist-packages/numpy/testing/decorators.py, line 146, in skipper_func return f(*args, **kwargs) File

Bug#778337: please provide Vcs- fields for the VCS where packaging maintained

2015-02-13 Thread Yaroslav Halchenko
Source: libusb-1.0 Version: 2:1.0.19-1 Severity: normal ATM $ debcheckout libusb-1.0-0 No repository found for package libusb-1.0-0. A Vcs-* field is missing in its source record. See Debian Developer's Reference 6.2.5:

Bug#777734: libfreenect version bump

2015-02-13 Thread Yaroslav Halchenko
On Wed, 11 Feb 2015, Benn Snyder wrote: libfreenect and associated packages are at v0.2.0 in Debian unstable.A However, upstream is at v0.5.2.A Please bump to the latest version. FWIW -- also uploaded backport builds of 0.5.1 to NeuroDebian happen you need them know. -- Yaroslav O.

Bug#777734: libfreenect version bump

2015-02-13 Thread Yaroslav Halchenko
On Fri, 13 Feb 2015, Yaroslav Halchenko wrote: On Wed, 11 Feb 2015, Benn Snyder wrote: libfreenect and associated packages are at v0.2.0 in Debian unstable.A However, upstream is at v0.5.2.A Please bump to the latest version. FWIW -- also uploaded backport builds of 0.5.1

Bug#775643: pymvpa: FTBFS in jessie: tests failed

2015-02-12 Thread Yaroslav Halchenko
Hi guys, sorry for not chiming in timely and wasting your time trying to reproduce it David. This FTBFS is due to a non-robust unittest which fails at times on some data (which is randomly generated). Since that line of mvpa is out of development for a while (we have python-mvpa2) the best

Bug#777708: please return configuration master_preferences file back under /etc

2015-02-11 Thread Yaroslav Halchenko
Package: chromium Version: 39.0.2171.71-2 Severity: normal File: /usr/lib/chromium/master_preferences master_preferences is a configuration file and in wheezy version lived happily under /etc/chromium/ and was useful to e.g. set a system-wide homepage . But in jessie it now will be located under

Bug#771805: input-events still registers events from the mouse

2015-02-11 Thread Yaroslav Halchenko
according to $ sudo input-events -t 10 15 /dev/input/event15 bustype : BUS_I8042 vendor : 0x2 product : 0x1 version : 0 name: PS/2 Generic Mouse phys: isa0060/serio2/input0 bits ev : EV_SYN EV_KEY EV_REL ... events continue to arrive. so I guess the issue

Bug#777248: please update version of testtools (in experimental)

2015-02-06 Thread Yaroslav Halchenko
Package: python-testtools Version: 0.9.39-1 Severity: wishlist I just saw that some matchers definitions are not exposed (absent in __all__), so went upstream to see that was already fixed and that there is 1.5.0 release in Nov 2014. So it would be really neat to get fresh testtools into Debian

Bug#776572: fail2ban: $named missing as dependency in init script

2015-01-29 Thread Yaroslav Halchenko
Thanks Jochen, Added at least upstream for now $ git show commit c96415da2790e03ed8ab9b0f7c38dbc7a5da359e Author: Yaroslav Halchenko deb...@onerussian.com Date: Thu Jan 29 08:32:20 2015 -0500 added $named and ufw to debian-initd (Debian bug #776572) diff --git a/files/debian-initd b

Bug#776063: dbus fails to upgrade rendering entire apt unusable

2015-01-23 Thread Yaroslav Halchenko
On Fri, 23 Jan 2015, Niels Thykier wrote: Thanks for reporting this issue. This is likely to be a bug in APT (or possibly in its interaction with dpkg), so I have CC'ed the relevant maintainers. @Yaroslav: Can you please provide your dpkg and apt logs to aid with the debugging? Last time

Bug#776063: dbus fails to upgrade rendering entire apt unusable

2015-01-23 Thread Yaroslav Halchenko
This looks very much like https://bugs.debian.org/771428. yes! unstable. Please check which dpkg version is used here. If it is between 1.17.17 and 1.17.21 there isn't much we can do about it. You ii apt 1.0.9.6 amd64commandline package manager ii dpkg

Bug#776063: dbus fails to upgrade rendering entire apt unusable

2015-01-23 Thread Yaroslav Halchenko
You should be able to get out of that apt state by just calling «dpkg --configure --pending». great -- thanks. FWIW This indeed allowed to mitigate it. -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,

Bug#776090: please package 4.7 for experimental

2015-01-23 Thread Yaroslav Halchenko
Source: insighttoolkit4 Version: 4.6 Severity: wishlist Thank you in advance. It was released in December 2014 P.S. needed for new release of ants package Cheers! -- System Information: Debian Release: 8.0 APT prefers testing APT policy: (900, 'testing'), (600, 'unstable'), (300,

Bug#776063: dbus fails to upgrade rendering entire apt unusable

2015-01-23 Thread Yaroslav Halchenko
Package: dbus Version: 1.8.12-1 Severity: critical Decided to upgrade my jessie/sid system today to see if remedy for hangouts not working came about (#770659) and upgrade failed because of dbus. Here is an output of (sudo apt-get -f install -y 21 | xsel -i) and I marked with critical severity

Bug#775272: fail2ban: Enabling php-url-fopen results in a FilterPyinotify error

2015-01-13 Thread Yaroslav Halchenko
On Tue, 13 Jan 2015, Francois Gouget wrote: On Tue, 13 Jan 2015, Yaroslav Halchenko wrote: [...] What I did have to change though is the logpath. My understanding is that it should parse the Apache access log so I did: -logpath = /var/www/*/logs/access_log +logpath = /var/log

Bug#775272: fail2ban: Enabling php-url-fopen results in a FilterPyinotify error

2015-01-13 Thread Yaroslav Halchenko
forcemerge 774689 775272 thanks Known issue... didn't have time unfortunately even though workaround is trivial - willing to try? $ git diff diff --git a/server/__init__.py b/server/__init__.py index 2b76f4b..74f3b75 100644 --- a/server/__init__.py +++ b/server/__init__.py @@ -23,3 +23,7 @@

Bug#775272: fail2ban: Enabling php-url-fopen results in a FilterPyinotify error

2015-01-13 Thread Yaroslav Halchenko
On Tue, 13 Jan 2015, Francois Gouget wrote: On Tue, 13 Jan 2015, Yaroslav Halchenko wrote: [...] Known issue... didn't have time unfortunately even though workaround is trivial - willing to try? This issue was systematic this morning and now it's gone and I have no idea why. (I see

Bug#774689: fail2ban: Error in FilterPyinotify callback: 'module' object has no attribute '_strptime_time'

2015-01-06 Thread Yaroslav Halchenko
On Tue, 06 Jan 2015, Frederik Himpe wrote: Package: fail2ban Version: 0.8.13-1 Severity: normal When starting the fail2ban service, this appeared in the fail2ban log: 2015-01-06 10:12:05,935 fail2ban.filter [7980]: ERROR Error in FilterPyinotify callback: 'module' object has no

Bug#774403: incorrect table layout (breaks the line, doesn't print process name) in some cases

2015-01-01 Thread Yaroslav Halchenko
Package: dstat Version: 0.7.2-4 Severity: normal dstat is very nice and I am using it more and more. Thanks for maintaining it within Debian. in my case weirdness came: total-cpu-usage -most-expensive- -dsk/total- most-expensive -net/total- usr sys idl wai hiq siq| cpu

Bug#773863: fail2ban: jail name is too long

2014-12-24 Thread Yaroslav Halchenko
On Wed, 24 Dec 2014, Ghostdog wrote: Package: fail2ban Version: 0.8.6-3wheezy3 Severity: minor Hello, If you enable the apache-overflows jail, fail2ban reports the following: fail2ban.actions.action: ERROR iptables -N fail2ban-apache-overflows iptables -A fail2ban-apache-overflows -j

Bug#769421: any progress

2014-12-18 Thread Yaroslav Halchenko
Just saw that python-git package uses optionally pygit2 for testing so thought to check how this ITP is going ;) Cheers and thanks in advance. I would recommend to bring this package under python-modules team umbrella -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org

Bug#769421: NEW queue

2014-12-18 Thread Yaroslav Halchenko
awesome -- THANKS! would you mind sharing/pointing to the source package interim? may be it would be worth uploading backport to NeuroDebian ;) -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,Psychological and

Bug#769595: was about to upload

2014-12-18 Thread Yaroslav Halchenko
I was about to upload 0.3.2.1 into experimental but then decided to enable testing and found that some tests point to regressions etc, so decided to postpone. I will push though to svn the changes I have done so far see https://github.com/gitpython-developers/GitPython/issues/216 cheers --

Bug#742873: Patch for #742873

2014-12-16 Thread Yaroslav Halchenko
On Sat, 15 Nov 2014, ydir...@free.fr wrote: tags 742873 + patch thanks Too bad it's too late for jessie... From 18bbc237763955c150da72daf9be2b9702fefb0a Mon Sep 17 00:00:00 2001 From: Yann Dirson ydir...@free.fr Date: Sat, 15 Nov 2014 16:45:50 + Subject: [PATCH] Fix CVE-2013-1953

Bug#772217: fixed in cmtk 3.2.2-1.1

2014-12-15 Thread Yaroslav Halchenko
thank you guys for helping with the cmtk package! And sorry for being slow to respond/react Upstream also issued a patch to address bashisms, see it attached. it seems that we are still at -1.2 in the archive so I could issue -2 with this one or if you are at it already -- just go ahead with NMU

Bug#772892: unblock: python-mne/0.8.6+dfsg-2

2014-12-12 Thread Yaroslav Halchenko
On Fri, 12 Dec 2014, Ivo De Decker wrote: Please unblock package python-mne Unblocked. Great -- thank you! P.S. For full clarity: while building this package in dirty environment today with pandas present, I found that build would fail with pandas version in sid (pandas failed

Bug#768730: [Debian-med-packaging] Bug#768730: python-mne REMOVED from testing

2014-12-11 Thread Yaroslav Halchenko
On Wed, 10 Dec 2014, Alexandre Gramfort wrote: hi, thanks Yarik for your help make v0.8.6 available on neurodebian. Regarding the patch I sent it via email as I don't know the procedure. Currently the master branch is packaged and it's already at 0.8.6. I am not sure if I should branch at

Bug#768730: Bug#768730: python-mne REMOVED from testing

2014-12-11 Thread Yaroslav Halchenko
On Thu, 11 Dec 2014, Andreas Tille wrote: Hi, I have not fully understood your conversation whether release team was contacted about 0.8.6 or not. I also failed to understand the issue with failed tests in connection with pandas. So I do not know whether you expect me to do something

Bug#768730: Bug#768730: python-mne REMOVED from testing

2014-12-11 Thread Yaroslav Halchenko
On Thu, 11 Dec 2014, Andreas Tille wrote: Hi Yaroslav, On Thu, Dec 11, 2014 at 04:27:05PM -0500, Yaroslav Halchenko wrote: I have had discussed with debian-release on IRC about feasibility of fixing the RC on top of the 0.8.6 in sid. Here is the transcript: 09:14 yoh: I am to fix up

Bug#768730: [Debian-med-packaging] Bug#768730: Bug#768730: python-mne REMOVED from testing

2014-12-11 Thread Yaroslav Halchenko
On Thu, 11 Dec 2014, Alexandre Gramfort wrote: hey, ok -- god blessing from release team for uploading patched 0.8.6 cool. got stuck now though since with sid's version of pandas (never migrated to jessie since some builds were failing... yeah... busy busy) mne build was failing:

Bug#772892: unblock: python-mne/0.8.6+dfsg-2

2014-12-11 Thread Yaroslav Halchenko
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: unblock Please unblock package python-mne python-mne 0.8.4+dfsg-1 was recently (2014-12-08) removed from jessie because of FTBFS due to failing unittests excercised at build time (writing to

Bug#772892: forgotten to be attached patch

2014-12-11 Thread Yaroslav Halchenko
for generated +pre-computed data, but instead use tempdir. (Closes: #768730) + + -- Yaroslav Halchenko deb...@onerussian.com Thu, 11 Dec 2014 09:33:18 -0500 + +python-mne (0.8.6+dfsg-1) unstable; urgency=low + + * New upstream version + * remove dependency on d3 + + -- Alexandre Gramfort

Bug#768730: [Debian-med-packaging] Bug#768730: python-mne REMOVED from testing

2014-12-10 Thread Yaroslav Halchenko
, and push in maint/0.8.4 branch or something. Alex On Tue, Dec 9, 2014 at 2:35 PM, Yaroslav Halchenko deb...@onerussian.com wrote: On Tue, 09 Dec 2014, Alexandre Gramfort wrote: hi, yes I have seen this sad news. Let me know what I can do to help. I've sent the patch to fix v0.8.4

Bug#768730: python-mne REMOVED from testing

2014-12-09 Thread Yaroslav Halchenko
On Tue, 09 Dec 2014, Alexandre Gramfort wrote: hi, yes I have seen this sad news. Let me know what I can do to help. I've sent the patch to fix v0.8.4 in a previous thread. patches are nice... for me what is even better a complete state of endeavors with a tested to be built package (and a

Bug#772689: ITP: jdcal -- Julian dates from proleptic Gregorian and Julian calendars

2014-12-09 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko deb...@onerussian.com * Package name: jdcal Version : 1.0 Upstream Author : Prasanth Nair prasant...@gmail.com * URL : https://github.com/phn/jdcal * License : BSD Programming Lang: Python

Bug#500399: Please improve the following message No space left on

2014-12-08 Thread Yaroslav Halchenko
Package: rdiff-backup Followup-For: Bug #500399 FWIW I have been bitten by this as well and I agree with Marc et al that msg must get improved -- System Information: Debian Release: jessie/sid Architecture: amd64 (x86_64) Kernel: Linux 3.17-1-amd64 (SMP w/4 CPU cores) Locale: LANG=en_US.UTF-8,

Bug#771341: segfaults in sqlite3_value_type while using from Python

2014-12-03 Thread Yaroslav Halchenko
On Wed, 03 Dec 2014, László Böszörményi (GCS) wrote: On Sat, Nov 29, 2014 at 4:36 PM, Yaroslav Halchenko y...@debian.org wrote: On Sat, 29 Nov 2014, László Böszörményi (GCS) wrote: May you give me some details how it happened in Sid? ok -- I will try to replicate again under sid

Bug#771805: looses ability to pass/react to mouse events

2014-12-02 Thread Yaroslav Halchenko
Package: gnome-shell Version: 3.14.1-1 Severity: important Tags: upstream I believe it is the same as known upstream https://bugzilla.gnome.org/show_bug.cgi?id=660832 I have installed jessie/sid recently on a new laptop and since then, with sloppy focus mode, or without (may be less frequently),

Bug#771805: most often triggered by

2014-12-02 Thread Yaroslav Halchenko
switching to another virtual desktop e.g. I select something with mouse in one, switch to another (on keyboard shortcuts) and unable to paste -- mouse is frozen. actually can reproduce almost always if I e.g. switch to another desktop # Super 1 select some text with mouse switch back # Super 2

Bug#771341: Bug#771549: fail2ban: init script refuses to start after a crash

2014-11-30 Thread Yaroslav Halchenko
On Sun, 30 Nov 2014, Frédéric Brière wrote: Package: fail2ban Version: 0.9.1-1 Severity: normal I've had fail2ban segfaulting yesterday (in libsqlite3; probably not worth a bug report, since I couldn't reproduce it). Anyway, fail2ban is no longer running[*], so let's restart it: Hi

Bug#771341: segfaults in sqlite3_value_type while using from Python

2014-11-29 Thread Yaroslav Halchenko
Hi László, Thanks for getting back to me On Sat, 29 Nov 2014, László Böszörményi (GCS) wrote: Package: libsqlite3-0 Version: 3.7.13-1+deb7u1 Severity: serious Originally detected I believe on sid installation, but forgot to capture the version, I will try to replicate/report later.

Bug#768675: mdp: FTBFS in jessie: tests failures

2014-11-28 Thread Yaroslav Halchenko
On Wed, 12 Nov 2014, Tiziano Zito wrote: Hi Andrey! On Wed 12 Nov, 23:05, Andrey Rahmatullin w...@debian.org wrote: The failing docstring indeed contains U+2013 EN DASH, it is taken from /usr/lib/python2.7/dist-packages/sklearn/feature_extraction/text.py (package python-sklearn). In

Bug#768675: mdp: FTBFS in jessie: tests failures

2014-11-28 Thread Yaroslav Halchenko
Ok, uploaded Tiziano it will be up to you to file an unblock request reportbug release.debian.org and provide debdiff (from 3.3-1) arguing the necessity of all the changes ;-) Cheers! -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org

Bug#771341: segfaults in sqlite3_value_type while using from Python

2014-11-28 Thread Yaroslav Halchenko
Package: libsqlite3-0 Version: 3.7.13-1+deb7u1 Severity: serious Originally detected I believe on sid installation, but forgot to capture the version, I will try to replicate/report later. But very consistent with wheezy (from which I am reporting now). Triggered by the backport fail2ban

Bug#771081: RFP: icy -- platform for bioimage informatics

2014-11-26 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist * Package name: icy Version : unknown (saw no tags in -core on github, download is unversioned) Upstream Author : Icy team * URL : http://icy.bioimageanalysis.org/ * License : GPL Programming Lang: Java Description :

Bug#768695: Bug #768695: statsmodels: FTBFS in jessie: ImportError: cannot import name DateRange

2014-11-26 Thread Yaroslav Halchenko
Thanks Tomasz, Upload it without delay, and let's hope none off those doesn't veil the actual problem in the code :-) Happy thanksgiving On November 26, 2014 5:18:50 PM EST, Tomasz Buchert tomasz.buch...@inria.fr wrote: Hi, this patch is even more concise. It builds properly on amd64 and i386

Bug#742976: Please promote to testing

2014-11-25 Thread Yaroslav Halchenko
On Tue, 25 Nov 2014, Dirk Heinrichs wrote: given that this is a security related package and that this version is the first one to be able to work with systemd's journal, it would be nice if it would be promoted to jessie soon. Thanks... I would be glad to BUT apparently I was 2 days too

Bug#770959: unblock: mpi4py/1.3.1+hg20131106-2

2014-11-25 Thread Yaroslav Halchenko
reliance on network via http*_proxy env var + * debian/patches +- up_tests_network_attr tag BaseTestSpawn tests as relying on network + access and exclude them from running at pkg build time (Closes: #769801) + + -- Yaroslav Halchenko deb...@onerussian.com Sun, 16 Nov 2014 15:06:21 -0500

Bug#768695: Bug #768695: statsmodels: FTBFS in jessie: ImportError: cannot import name DateRange

2014-11-25 Thread Yaroslav Halchenko
On Tue, 25 Nov 2014, Tomasz Buchert wrote: Hi have uploaded the attached debdiff targetted at testing-proposed-updates to DELAYED/3-day. See also the pre-approval/unblock bug for relesae.debian.org, #770730. Unfortunately, it FTBFS on i386 still, there are a couple of test suite

Bug#770905: assistant keeps CPU 100% busy

2014-11-25 Thread Yaroslav Halchenko
On Tue, 25 Nov 2014, Joey Hess wrote: You were asking about the assistant's monitoring of /usr/bin/git-annex and auto-restarting on change at around this time. Do you think that could be related? I have upgraded only after I have detected this high cpu load, troubleshooted, and restarted...

Bug#768695: Bug #768695: statsmodels: FTBFS in jessie: ImportError: cannot import name DateRange

2014-11-25 Thread Yaroslav Halchenko
On Wed, 26 Nov 2014, Tomasz Buchert wrote: + import pandas as _ +-return True ++return hasattr(_, DateRange) imho this is way too aggressive and would cause skipping all pandas related tests (DateRange dependent or not) + except ImportError: + return

Bug#770730: thanks for the NMU

2014-11-24 Thread Yaroslav Halchenko
Hi Guys, Thanks for the NMU. Note that that instead of a heavy patch you could have disabled the tests (if we decide to fix by burring bugs away) by extending --exclude=sandbox option in debian/rules without any patch to upstream. Feel welcome to reupload without delay though - a patch is

Bug#770867: unblock: ants/2.1.0~rc2+git3-g9103999-4

2014-11-24 Thread Yaroslav Halchenko
:43:54.0 -0500 @@ -1,3 +1,21 @@ +ants (2.1.0~rc2+git3-g9103999-4) unstable; urgency=medium + + * patches/up_lower_cc_3_test_i386_precision +- lower precision for the ANTS_CC_3_WARP_METRIC_0 test to mitigate + FTBFS on i386 (Closes: #768645) + + -- Yaroslav Halchenko deb

Bug#769801: Fails in pbuilder

2014-11-24 Thread Yaroslav Halchenko
ok -- will build and upload shortly. On Mon, 24 Nov 2014, Anton Gladky wrote: Thanks Yaroslav, waiting for your upload, because mpi4py autoremoval pulls also a bunch of another packages to remove. Cheers Anton 2014-11-24 17:36 GMT+01:00 Yaroslav Halchenko y...@debian.org: I would

Bug#770730: thanks for the NMU

2014-11-24 Thread Yaroslav Halchenko
On Mon, 24 Nov 2014, Tomasz Buchert wrote: I still think that there are cases well the interface of scipy will bite you, but I did my best. and thanks for that! Cheers, -- Yaroslav O. Halchenko, Ph.D. http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org Research Scientist,

Bug#770905: assistant keeps CPU 100% busy

2014-11-24 Thread Yaroslav Halchenko
Package: git-annex Version: 5.20141024 Severity: normal I know that the version I have is outdated but it is not a regularly occuring issue, so decided to investigate/report instead of just kill/upgrade/restart. I have noted busy fan of the laptop, and saw that 31825 yoh 20 0 678276

Bug#770472: Info received (Bug#770472: Acknowledgement (libfreeipmi12: programs using libfreeipmi2 crash the first time after a system boot))

2014-11-21 Thread Yaroslav Halchenko
thanks for digging into it... not sure if I should do anything about it, but let's at least ask upstream Dear Albert, User reported some kernel trap hit upon initial boot in Xen instances, see more detail : Package: libfreeipmi12 Version: 1.1.5-3 http://bugs.debian.org/770472 Is that something

Bug#770133: gcalcli 2.x is no longer compatible with google's api

2014-11-18 Thread Yaroslav Halchenko
On Tue, 18 Nov 2014, Jon wrote: Package: gcalcli Version: 2.4.2-2 Severity: grave Justification: renders package unusable Dear Maintainer, Google just removed the deprecated APIs used by gcalcli 2.x rendering the package unusable. The upstream author says that the APIs in question have

Bug#768976: unblock: fail2ban/0.9.1-1

2014-11-10 Thread Yaroslav Halchenko
? ;)) [2014-10-28] Accepted fail2ban 0.9.1-1 (source all) into unstable (Yaroslav Halchenko) 0.9.1 is the 2nd release in the 0.9.0 line and I had 0.9.0 in experimental for a while. So far it shows great promise to be very stable and much more versatile than 0.8.x -- we introduced multiline matching

Bug#768981: unblock: nipy/0.3.0+git262-gbb838d7-1

2014-11-10 Thread Yaroslav Halchenko
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: unblock Please unblock package nipy It was removed from jessie a year ago due to a test failing https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=729594 which was resolved also long ago, but I

Bug#768981: unblock: nipy/0.3.0+git262-gbb838d7-1

2014-11-10 Thread Yaroslav Halchenko
On Mon, 10 Nov 2014, Niels Thykier wrote: Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: unblock Please unblock package nipy It was removed from jessie a year ago due to a test failing

Bug#768976: unblock: fail2ban/0.9.1-1

2014-11-10 Thread Yaroslav Halchenko
[1]. [2014-10-28] Accepted fail2ban 0.9.1-1 (source all) into unstable (Yaroslav Halchenko) 0.9.1 is the 2nd release in the 0.9.0 line and I had 0.9.0 in experimental for a while. So far it shows great promise to be very stable and much more versatile than 0.8.x -- we introduced

Bug#768730: [Debian-med-packaging] Bug#768730: [lu...@lucas-nussbaum.net: Bug#768730: python-mne: FTBFS in jessie: Tests failures]

2014-11-10 Thread Yaroslav Halchenko
amount of changes from 0.8.4 to 0.8.6 seems to be miniscule and just a bug fix so we could demand unblock for this one $ git diff v0.8.4..v0.8.6 --stat MANIFEST.in | 5 + doc/source/whats_new.rst | 2 +- mne/__init__.py | 2 +- mne/coreg.py | 3 ++- so I

Bug#768730: [Debian-med-packaging] Bug#768730: [lu...@lucas-nussbaum.net: Bug#768730: python-mne: FTBFS in jessie: Tests failures]

2014-11-10 Thread Yaroslav Halchenko
On Mon, 10 Nov 2014, Andreas Tille wrote: On Mon, Nov 10, 2014 at 12:51:39PM -0500, Yaroslav Halchenko wrote: amount of changes from 0.8.4 to 0.8.6 seems to be miniscule and just a bug fix so we could demand unblock for this one I'll take the bet that this will fail. I personally would

Bug#768689: [Python-apps-team] Bug#768689: cython: FTBFS in jessie: Tests failures

2014-11-09 Thread Yaroslav Halchenko
Hi Lucas, Could you try 0.21.1-1 which is in sid already for 18days? It didn't propagate from sid to jessie by 5th since some weak buildd's failed to build it (just stalling), and I believe this issue was fixed in that version already I am going to prep unblock request today/tomorrow whenever I

Bug#768818: unblock: cython/0.21.1-1

2014-11-09 Thread Yaroslav Halchenko
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: unblock Please unblock package cython It has been uploaded and bug-free in sid for 18 days, so long before the freeze date. The only reason it didn't propagate since some build bots (mips,

Bug#768828: FTBFS against cython 0.21.1

2014-11-09 Thread Yaroslav Halchenko
that patch from upstream to resolve this FTBFS. Date: Sat, 11 Oct 2014 11:13:23 -0400 From: Yaroslav Halchenko li...@onerussian.com To: cython-de...@python.org Cc: k...@packages.debian.org Subject: [Cython] kivy patch for: Cython 0.21 released On Sat, 11 Oct 2014, Stefan Behnel wrote: Yaroslav

Bug#765147: seaborn: FTBFS: unsatisfiable build-dependency: python-matplotlib ( 1.2.0~) but 1.3.1-2 is to be installed

2014-11-09 Thread Yaroslav Halchenko
sorry about the delay... thought to upload something freshier before freeze but didn't happen -- will push fix solely for this shortly Cheers, On Sun, 09 Nov 2014, Simon McVittie wrote: On Mon, 13 Oct 2014 at 14:24:11 -0400, Yaroslav Halchenko wrote: ah - right... poor buildds can't satisfy

Bug#767356: X.Org segfaults when starting on an Intel+Radeon laptop at glamor_set_screen_pixmap from within radeon_drv

2014-10-30 Thread Yaroslav Halchenko
Package: xserver-xorg-core Version: 2:1.16.1-1 Severity: important I have got hp zbook 14 with has Intel IGP + Radeon GPU. In pursue of enabling access to the display ports on the docking station installed 3.17 kernel and fresh intel driver. With xrandr --setprovideroffloadsink radeon Intel

Bug#767356: Acknowledgement (X.Org segfaults when starting on an Intel+Radeon laptop at glamor_set_screen_pixmap from within radeon_drv)

2014-10-30 Thread Yaroslav Halchenko
FWIW dirty workaround was to diver radeon_drv.so , restart gdm3 so it fails to find it, remove diversion, restart gdm3 and it managed to start fine (well -- now I got a stuck mouse's cursor pointer copy in the middle of the screen for some reason, but that is the least of my problems atm) --

Bug#767255: fail2ban: Typo in default jail.conf

2014-10-29 Thread Yaroslav Halchenko
tags +fixed-upstream thanks Thanks! Fixed upstream for now On Wed, 29 Oct 2014, Skibbi wrote: Package: fail2ban Version: 0.9.1-1 Severity: minor Dear Maintainer, There is a typo in default jail.conf. logpath for [apache-shellshock] jail is defined as

Bug#767114: fail2ban: please document what the Recommends and Suggests are good for

2014-10-28 Thread Yaroslav Halchenko
On Tue, 28 Oct 2014, Christoph Anton Mitterer wrote: It would be nice if the package description could tell how the Recommends and Suggests are used. For some (iptables, mailx and system-log-daemon) one can probably easy guess, but for others (whois, python3-pyinotify python3-systemd) it's

Bug#767123: fail2ban: don't ship /etc/fail2ban/paths-fedora.conf and friends

2014-10-28 Thread Yaroslav Halchenko
perfectionst! ;) I agree though... patch (better into git right away) with a grep -v paths-debian | xargs rm would be very welcome On Tue, 28 Oct 2014, Christoph Anton Mitterer wrote: Package: fail2ban Version: 0.9.1-1 Severity: minor Hi. Just a very minor thing... perhaps we don't

Bug#767187: Xorg segmentation fault ate glyphs_to_dst (every time I start emacs)

2014-10-28 Thread Yaroslav Halchenko
Package: xserver-xorg-video-intel Version: 2:2.99.916-1~exp1 Severity: important This is a fun new zbook 14 which brings me lots of joy to make the damn thing work... so I wasa trying intel drivers from experimental on 3.17 kernel trying to get some docking station external ports work...

Bug#766676: [Pkg-fglrx-devel] Bug#766676: /usr/bin/Xorg: symbol lookup error: /usr/lib/xorg/modules/linux/libglx.so: undefined symbol: LoadExtension

2014-10-27 Thread Yaroslav Halchenko
On Mon, 27 Oct 2014, Patrick Matthäi wrote: Could you please update glx-diversions to 0.5.1 (from sid) and report if the issue is gone? I have tried (which involved reinstalling fglrx drivers/packages) but got the same result with 0.5.1 -- how should have it helped? diverted to MESA? I have

Bug#766901: patch to get fail2ban reports back

2014-10-27 Thread Yaroslav Halchenko
, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/bash From: Yaroslav Halchenko deb...@onerussian.com Subject: Make compatible with Fail2ban 0.9.x series also includes some white-spaces (non-functional) changes to harmonize indentation Forwarded: not yet -- please do! Last-Update

Bug#766479: confirming NMU which should close these 2 issues

2014-10-26 Thread Yaroslav Halchenko
On Sun, 26 Oct 2014, Emilio Pozuelo Monfort wrote: Control: forcemerge 766479 766534 On 24/10/14 22:34, Yaroslav Halchenko wrote: I picked up two patches from upstream which should resolve this issues. I have uploaded the NMU to 3-days delayed (I really need to push out nipype release

Bug#766479: Acknowledgement (/usr/bin/dot: segfault while rendering png. Leads to FTBFS for another pkg)

2014-10-24 Thread Yaroslav Halchenko
It seems that upstream's fix which followed the release is addressing this issue (see below). Also there was a fix for #712836 ... would someone be kind to prep new cairo package to resolve those two issues? meanwhile I will prep NMU with those two patches and upload to 3-days delayed here is a

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