Bug#1057398: [Debian-med-packaging] Bug#1057398: FTBFS: libITKIOGDCM-5.3.so.1: undefined reference to `gdcm::DirectionCosines::~DirectionCosines()'

2023-12-04 Thread Emmanuel Promayon
Hi, This seems due to bug#1056953 [1] as the error message is linked to the same missing symbol. Best regards, Emmanuel [1] https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056953 On 04/12/2023 13:36, Chris Hofstaedtler wrote: Source: elastix Version: 5.1.0-1 Severity: serious Tags:

Bug#1056953: [Debian-med-packaging] Bug#1056953: gdcm: ABI broke in last version 3.0.22-1

2023-12-04 Thread Emmanuel Promayon
.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging -- Emmanuel Promayon Professeur Univ. Grenoble Alpes - Polytech Grenoble Laboratoire TIMC - équipe GMCAO

Bug#1013153: camitk: vtk[6,7] removal

2023-06-22 Thread Emmanuel Promayon
to adapt camitk to vtk9 in the foreseable future or is it rather time to remove this package from Debian? Kind regards Andreas. -- Emmanuel Promayon Professeur Univ. Grenoble Alpes - Polytech Grenoble Laboratoire TIMC - équipe GMCAO

Bug#1013153: camitk: vtk[6,7] removal

2023-02-01 Thread Emmanuel Promayon
Dear Andreas, On 01/02/2023 13:35, Andreas Tille wrote: Hi Emmanuel, Am Tue, Jan 31, 2023 at 01:53:15PM +0100 schrieb Emmanuel Promayon: could you simply push your patch and we can see the build log in Salsa CI? I just pushed both (VTK9 compatibility and dicom component disability

Bug#1013153: camitk: vtk[6,7] removal

2023-01-31 Thread Emmanuel Promayon
On 31/01/2023 11:22, Andreas Tille wrote: Dear Emmanuel, could you simply push your patch and we can see the build log in Salsa CI? I just pushed both (VTK9 compatibility and dicom component disability) to salsa (in the main branch, hopefully that's ok) Kind regards

Bug#1013153: camitk: vtk[6,7] removal

2023-01-30 Thread Emmanuel Promayon
Dear Andreas, I managed to patch the current CamiTK 5.0.2version  to build with VTK9 (vtk9-compatibility.patch in attachment). The build then stopped with the following error: /build/camitk-5.0.2/imaging/components/dicom/DicomComponent.cpp:40:10: fatal error: vtkGDCMImageReader.h: No such

Bug#1013153: camitk: vtk[6,7] removal

2023-01-26 Thread Emmanuel Promayon
Dear Andreas, Just to let you know that I managed to compile CamiTK with VTK9 but I had to replace the base class that allows for the interaction between VTK and Qt. This is also related to bug ##979306 [1]. I can patch CamiTK to build with VTK9, but there are some major problem with the

Bug#1013153: camitk: vtk[6,7] removal

2023-01-16 Thread Emmanuel Promayon
Control: forwarded -1 Emmanuel Promayon, Celine Fouard Hi Emmanuel and Celine, Debian has dropped support for VTK 6/7 and camitk needs to be ported to VTK9. Currently libvtk9-qt-dev is not installable to do a test build. It would be great if you could confirm that camitk builds with VTK9. Kind

Bug#997120: [Debian-med-packaging] Bug#997120:

2022-02-15 Thread Emmanuel Promayon
Dear Jose and Andreas, On 14/02/2022 17:02, Andreas Tille wrote: Am Mon, Feb 14, 2022 at 12:18:47AM +0100 schrieb Jose Luis Rivero: You are welcome. This bug is preventing one of my packages (Gazebo) from being migrated to testing. Could we please upload a revision bump of the current version

Bug#997120:

2022-02-07 Thread Emmanuel Promayon
amd64 > Build Type: full > Build-Space: 6204608 > Build-Time: 725 > Distribution: unstable > Host Architecture: amd64 > Install-Time: 72 > Job: /home/jrivero/code/debian/camitk_4.1.2-5.dsc > Lintian: warn > Machine Architecture: amd64 > Package: camitk > Packa

Bug#945454: elastix: FTBFS with current opencv and gdcm

2019-11-25 Thread Emmanuel Promayon
Dear Steve, Thank you for this bug report. After checking the build log you provided, I found the same CMake error message as in #945453 https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=945453 Therefore I think all packages that depends on insight-toolkit will fail the same way due to bug

Bug#945453: camitk: FTBFS, uninstallable build-deps in unstable

2019-11-25 Thread Emmanuel Promayon
Dear Steve, Thank you for this bug report. After checking the build log you provided, I found this: CMake Error at /usr/lib/cmake/ITK-4.13/Modules/ITKMINC.cmake:15 (find_package):   By not providing "FindLIBMINC.cmake" in CMAKE_MODULE_PATH this project has   asked CMake to find a package

Bug#926430: [Debian-med-packaging] Bug#926430: fixed in camitk 4.1.2-3

2019-04-06 Thread Emmanuel Promayon
Thank you for this very quick and efficient bug fix! Emmanuel On 06/04/2019 07:45, Andreas Tille wrote: On Fri, Apr 05, 2019 at 11:33:24PM +0200, Tobias Frost wrote: Hi Andreas, thanks for the upload! Can you file an unblock request so that the package will migrate?

Bug#914817: [Debian-med-packaging] Bug#914817: Bug#914817: camitk: FTBFS on i386

2018-12-02 Thread Emmanuel Promayon
Hi, These are the steps I followed to investigate this bug: - modified the debian/rules of the vtk7 package by adding: ifeq ($(DEB_BUILD_ARCH),i386) # prevent undesirable excess precision export DEB_CXXFLAGS_MAINT_APPEND=-ffloat-store endif - rebuild vtk7 for i386 locally with this new

Bug#914817: [Debian-med-packaging] Bug#914817: camitk: FTBFS on i386

2018-11-29 Thread Emmanuel Promayon
aging mailing list debian-med-packag...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging -- Emmanuel Promayon Professeur Univ. Grenoble Alpes / Polytech Grenoble Laboratoire TIMC-IMAG / équipe GMCAO Responsable du département Technologies de l'Information pour la Santé

Bug#911793: Control: reassign -1 src:gdcm 2.8.7-2

2018-11-23 Thread Emmanuel Promayon
Dear all Thank to Paul for your answers about the autoremoval and explanation about the ABI problem. It seems that Adrian Bunk's triage message in 909120 (added blocking bug(s) of 909120: 911793) did push the autoremoval for another month (thanks to Adrian as well, as that's exactly what is

Bug#909120: camitk FTBFS: tests segfault (Bug #909120)

2018-10-22 Thread Emmanuel Promayon
Dear all, I have read that upstream is joining Debian Science to package recent upstream version VTK8. I expect that VTK6 will be removed from Debian soon. So yes, I'd strongly recommend to follow the stable release cycle of VTK upstream, which means that porting camitk to VTK7 is necessary

Bug#909120: camitk FTBFS: tests segfault (Bug #909120)

2018-09-24 Thread Emmanuel Promayon
Hello all Thanks again to Andreas and Bernhard. You are right: the problem comes from gdcm 2.8.7-2. I tried to build the package with the previous version of vtkgdcm. With version 2.8.7-1 all the tests pass and the packages are built normally (and autopkgtest does not fail either). If I

Bug#909120: camitk FTBFS: tests segfault (Bug #909120)

2018-09-21 Thread Emmanuel Promayon
anged/been uploaded in sid in the dependencies of a package during a period of time (here from 9 Sep to 15 Sep)? This might help me finding how to solve this. Thanks for your help again and hopefully this will be tackled down soon! Mahnu On 20/09/2018 20:59, Andreas Tille wrote: Control: tags

Bug#848815: camitk: FTBFS: make[2]: *** [sdk/libraries/core/CMakeFiles/library-camitkcore.dir/all] Error 2

2016-12-21 Thread Emmanuel Promayon
On 21/12/16 09:39, Adrian Bunk wrote: On Tue, Dec 20, 2016 at 10:55:33AM +0100, Andreas Tille wrote: Hi Emmanuel, just to make sure you noticed this RC critical error. On Mon, Dec 19, 2016 at 10:29:47PM +0100, Lucas Nussbaum wrote: Source: camitk Version: 4.0.4-1 Severity: serious Tags:

Bug#836990: libcamitk4: fails to upgrade from 'jessie' - trying to overwrite /usr/bin/camitk-config

2016-10-06 Thread Emmanuel Promayon
On 06/10/16 22:53, Adrian Bunk wrote: Note that coninstallable implies either renaming /usr/bin/camitk-config, or moving it to a libcamitk-bin package (depending on whether it is specific for one libcamitk version or usable with all). Yes, thank you Adrian. This was discussed and explained

Bug#836990: libcamitk4: fails to upgrade from 'jessie' - trying to overwrite /usr/bin/camitk-config

2016-09-13 Thread Emmanuel Promayon
Dear Andreas, Thank you for this bug report. I will try to fix this as well as packaging the new release (that fixes an OpenGL rendering problem on laptop when using integrated card). I am planning to have this done soonish (hopefully by the end of september, I am new to packaging with git

Bug#798167: camitk and vtk/itk transitions

2016-04-28 Thread Emmanuel Promayon
On 27/04/16 02:03, Mattia Rizzolo wrote: From there I am not quite sure how to ask for an upload using the "experimental" branch (or should experimental be first merged to master?) Not sure what Gianfranco already told you, but the "experimental" branch was created mainly to allow the

Bug#798167: camitk and vtk/itk transitions

2016-04-25 Thread Emmanuel Promayon
On 24/04/16 18:30, Mattia Rizzolo wrote: On Sun, Apr 24, 2016 at 05:56:00PM +0200, Emmanuel Promayon wrote: > I checked Gianfranco's experimental branch and his work is great! > There is few build-depend packages that can be removed (and I noticed > the problem with the pixmaps), but t

Bug#798167: [Debian-med-packaging] Bug#798167: camitk and vtk/itk transitions

2016-04-24 Thread Emmanuel Promayon
e next few weeks, hopefully upstream 4.0.1 will solve the display bug and I can polish the packaging. Thanks you again all for your work, it is amazing how every time there is something new to learn! Emmanuel -- Emmanuel Promayon, Maitre de conférences Univ. Grenoble Alpes / Polytech Grenoble

Bug#798167: [Debian-med-packaging] Bug#798167: camitk: depends on vtk 5

2016-04-18 Thread Emmanuel Promayon
th VTK_LEGACY_REMOVE defined. VTK 6.3 is available from experimental. Best, Gert -- Emmanuel Promayon, Maitre de conférences Univ. Grenoble Alpes / Polytech Grenoble Laboratoire TIMC-IMAG / équipe GMCAO Tel. +33/0 456 52 00 03 smime.p7s Description: S/MIME Cryptographic Signature

Bug#798167: camitk: depends on vtk 5

2016-04-16 Thread Emmanuel Promayon
will be to learn how to use git for the packaging! Cheers, Mahnu [1] https://bugzilla-timc.imag.fr/show_bug.cgi?id=181 (this contains a lot of reference to other people who seem to have this problem) On 15/04/16 19:28, Mattia Rizzolo wrote: On Tue, Mar 22, 2016 at 06:35:44PM +0100, Emmanuel

Bug#798167: camitk: depends on vtk 5

2016-03-22 Thread Emmanuel Promayon
Just to add some updated information about this bug. We are currently working on camitk 4.0, that should be released hopefully very soon (the target is before the end of March). CamiTK 4.0 has the exact same features as CamiTK 3.5 (released at the end of January 2016) but updates the

Bug#701250: [Debian-med-packaging] Bug#701250: Camitk Debian package needs some love [was: Candidates for removal from testing (2013-06-30)]

2013-07-04 Thread Emmanuel Promayon
, Emmanuel [1] http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=714935 On 01/07/13 14:11, Emmanuel Promayon wrote: Sounds like a reasonable plan. The only thing that would deserve some enhancement for the future is that it helps if you publish this plan straight to the bug report a bit earlier

Bug#701250: Camitk Debian package needs some love [was: Candidates for removal from testing (2013-06-30)]

2013-07-01 Thread Emmanuel Promayon
libavg Dmitry E. Oboukhov un...@debian.org avinfo (U) Emmanuel Promayon emmanuel.proma...@imag.fr camitk (U) Enrico Tassi gareuselesi...@debian.org freepops Eric Dorland e...@debian.org granule Fabrizio Regalli fab...@fabreg.it flush Filippo Rusconi lopi...@debian.org

Bug#701250: Camitk Debian package needs some love [was: Candidates for removal from testing (2013-06-30)]

2013-07-01 Thread Emmanuel Promayon
-med (and still in my MoM in fact!). Thank you again for your work and vigilance! Emmanuel -- Emmanuel Promayon UJF-Grenoble 1, CNRS, TIMC-IMAG UMR 5525 (équipe GMCAO) Institut de l'Ingénierie de l'Information de Santé Faculté de Médecine - 38706 La Tronche cedex - France Tel. +33/0 456 52 00 03

Bug#689951: Package appears to be non-free

2012-10-24 Thread Emmanuel Promayon
properly (#689021 and 690830) For #690830 there is a patch proposal and there is also a another way that I would like to try first (that will probably have better compiler specific/multi-arch support). Thanks again, all your help is really appreciated. -- Emmanuel Promayon UJF-Grenoble 1, CNRS, TIMC

Bug#689951: Package appears to be non-free

2012-10-24 Thread Emmanuel Promayon
. Is this doable for you? Yes, I think there is no problem to do that between now and the end of the month. -- Emmanuel Promayon UJF-Grenoble 1, CNRS, TIMC-IMAG UMR 5525 (équipe GMCAO) Institut de l'Ingénierie de l'Information de Santé Faculté de Médecine - 38706 La Tronche cedex - France Tel. +33/0 456 52

Bug#689951: Package appears to be non-free

2012-10-23 Thread Emmanuel Promayon
make camitk rather contrib than non-free. Christophe are you in touch with upstream ? Even if Charles mentioned that there are other non-free pieces in the license contacting upstream about a DFSG free license might not harm in anyway. Kind regards Andreas. -- Emmanuel Promayon