Re: Bug#988650: logol: broken symlink: /usr/share/logol/lib/xml-apis.jar -> ../../java/xml-apis.jar

like to forward this to Debian Java list for comments. > > Kind regards > > Andreas. > > On Mon, May 17, 2021 at 01:50:01PM +0200, olivier sallou wrote: > > Issue seems to be related to xml-apis.jar not being symlinked itself > > > > /usr/share/java# ls *xml-api* &g

Re: [Debian-med-packaging] Bug#973070: Help needed: Bug#973070: libsis-base-java: FTBFS: Could not delete the directory targets/unit-test-wd/ch.systemsx.cisd.base.unix.UnixTests because: 1 exceptions:

e to delete file: > targets/unit-test- > wd/ch.systemsx.cisd.base.unix.UnixTests/someDanglingLink] > Exception in thread "main" org.apache.commons.io.IOExceptionList: 1 > exceptions: [java.io.IOException: Unable to delete file: > targets/unit-test- > wd/ch.systemsx.cisd.b

Re: Any hints about maven libs from Debian Java team (Was: IGV update - any takers?)

On 11/14/19 2:10 PM, Markus Koschany wrote: > Hi, > > Am 14.11.19 um 09:44 schrieb Andreas Tille: >> Hi, >> >> I'd be very happy if Debian Java team could comment on the analysis >> of libs done by Olivier to enable us upgrading IGV. >> >> On Thu, Nov

Re: Error with jh_build

> De: "Cyril Richard" > À: "Debian Java List" > Envoyé: Vendredi 27 Septembre 2019 16:25:33 > Objet: Error with jh_build > Dear you, I'm currently trying to build a debian package of a java > application. > The application should be host here: [ > https://salsa.debian.org/science-team/spview |

Re: [Debian-med-packaging] Bug#923756: libhac-java: FTBFS in buster/sid

- Andreas Tille a écrit : > Hi Debian Java team, > > On Tue, Mar 05, 2019 at 12:19:40AM +, Santiago Vila wrote: > > jh_build -J hac.jar src > > find src -name *.java -and -type f -print0 | xargs -s 512000 -0 > > /usr/lib/jvm/default-java/bin/javac -g -cp :debian/_jh_build.hac -d > >

Re: New version has switched build system to Maven - any hint how to resolve dependencies?

- Mail original - > De: "andreas" > À: "Debian Java List" > Cc: "debian-med" , "Afif Elghraoui" > > Envoyé: Mardi 29 Janvier 2019 10:20:48 > Objet: Re: New version has switched build system to Maven - any hint how to > resolve dependencies? > Hi Emmanuel, > > On Mon, Jan 28, 2019

Re: Attempt to upgrade libjsonp-java - help needed

On 1/25/19 9:45 AM, Andreas Tille wrote: > Hi Olivier, > > On Thu, Jan 24, 2019 at 10:59:33PM +0100, Olivier Sallou wrote: >>>> should be able to add in pom.xml >>>> >>>> >>>>     true >>>> >>> This works (

Re: Attempt to upgrade libjsonp-java - help needed

- Andreas Tille a écrit : > Hi Olivier, > > On Thu, Jan 24, 2019 at 05:54:54PM +0100, Olivier Sallou wrote: > > > > should be able to add in pom.xml > > > > > >     true > > > > This works (Emmanuel, just leaving ou

Re: Attempt to upgrade libjsonp-java - help needed

executed by maven debhelper I don't know hwo to add this argument > > Kind regards > > Andreas. > -- Olivier Sallou Univ Rennes, Inria, CNRS, IRISA Irisa, Campus de Beaulieu F-35042 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fing

Re: Bug#893409: pixelmed FTBFS with openjdk-9

On 12/19/18 11:46 AM, Andreas Tille wrote: > Hi, > > On Wed, Dec 19, 2018 at 10:39:55AM +0100, Olivier Sallou wrote: >>> The missing class is in libjaxb-api-java. Just make sure it's on the >>> CLASSPATH. >> yeap, an other issue at java migration to openjdk 10

Re: Bug#893409: pixelmed FTBFS with openjdk-9

On 12/19/18 11:46 AM, Andreas Tille wrote: > Hi, > > On Wed, Dec 19, 2018 at 10:39:55AM +0100, Olivier Sallou wrote: >>> The missing class is in libjaxb-api-java. Just make sure it's on the >>> CLASSPATH. >> yeap, an other issue at java migration to openjdk 10

Re: Bug#893409: pixelmed FTBFS with openjdk-9

k 10/11 Adding this lib to deps should fix the pb > Regards, > > Markus > > > > ___ > Debian-med-packaging mailing list > debian-med-packag...@alioth-lists.debian.net > https://alioth-lists.debian.net/cgi-bin/mailman/listinf

Re: [Debian-med-packaging] Bug#906371: Changes in alter-sequence-alignment break build of jmodeltest (Was: Bug#906371: jmodeltest: FTBFS in buster/sid)

1.10+dfsg/src/main/java/es/uvigo/darwin/jmodeltest/exe/Distributor.java:23: >> warning: [deprecation] Observable in java.util has been deprecated >> [javac] import java.util.Observable; >> [javac] ^ > Any more hints? > > Kind regards > >Andreas. > -- Olivier Sallou Univ Rennes, Inria, CNRS, IRISA Irisa, Campus de Beaulieu F-35042 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438

Re: biojava-live (1.7) does not build with OpenJDK 11: package com.sun.corba.se.spi.legacy.connection does not exist

- Andreas Tille a écrit : > Hi, > > I tried to polish the packaging of biojava-live and was running into: Biojava is quite old (recent is biojava 4), and kept mainly for compatibility i think. As suggested by emmanuel, maybe easiest would be to patch out corba related stuff (is there

Re: Bug#912385: rdp-classifier FTBFS with OpenJDK 11

- Mail original - > De: "andreas" > À: 912...@bugs.debian.org, "Debian Java List" > Envoyé: Mercredi 31 Octobre 2018 07:07:36 > Objet: Re: Bug#912385: rdp-classifier FTBFS with OpenJDK 11 > Control: tags -1 help > > Hi, > > I'm afraid I need help for this bug from the Debian Java

Re: Unresolved ${java:Depends} (Was: IGV)

r: META-INF/MANIFEST.MF > Manifest-Version: 1.0 > Permissions: all-permissions > Application-Name: IGV > Main-Class: org.broad.igv.ui.Main > > > I can not see any difference. Is there any other place to look? > > Kind regards > >Andreas. > -- Olivier Sal

Re: Continued build issues with IGV: Could not resolve org.apache.logging.log4j:log4j:debian

On 10/16/2018 02:51 PM, Andreas Tille wrote: > Hi Olivier, > > thanks a lot for looking into this. I pushed missing d/control dep liblog4j2-java > > On Tue, Oct 16, 2018 at 10:45:08AM +0200, Olivier Sallou wrote: >> >>> sorry for the private ping, but may be you

Re: Continued build issues with IGV: Could not resolve org.apache.logging.log4j:log4j:debian

On 10/16/2018 02:51 PM, Andreas Tille wrote: > Hi Olivier, > > thanks a lot for looking into this. > > On Tue, Oct 16, 2018 at 10:45:08AM +0200, Olivier Sallou wrote: >> >>> sorry for the private ping, but may be you have an idea how to >>> build igv? >

Re: Suspect bug in javahelper (Was: Problems building latest version of htsjdk)

or exit status > 2 > > > I could work around this by simply overriding jh_installlibs by a copy > statement but I'd love to avoid this kind of hacks. > > Any idea what might be wrong here? > > Kind regards > > Andreas. > -- Olivier Sallou Univ Rennes, Inria, CNRS, IRISA Irisa, Campus de Beaulieu F-35042 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438

Re: How to upgrade code from batik 1.8 to 1.10 which is lacking XMLConstants [Was: cgview.jar does not find class from batik-util]

On 08/22/2018 09:38 AM, Andreas Tille wrote: > Hi Olivier, > > On Wed, Aug 22, 2018 at 09:18:12AM +0200, Olivier Sallou wrote: >> looking at batik-util.jar, I see no org/apache/batik/util/XMLConstants >> inside >> >> >> I can see it in batik  source co

Re: Probable new default version of Java issue: Bug#906371: jmodeltest: FTBFS in buster/sid

ld-indep] Error 2 >> dpkg-buildpackage: error: debian/rules build-indep subprocess returned exit >> status 2 >> >> >> The build was made with "dpkg-buildpackage -A" in my autob

Re: Help needed for change of build system to gradle of package libsis-jhdf5-java

Le dim. 19 août 2018 à 16:17, Bernd Rinn a écrit : > On 08/19/2018 04:02 PM, olivier sallou wrote: > > > > > > Le dim. 19 août 2018 à 15:23, Bernd Rinn > <mailto:br...@ethz.ch>> a écrit : > > > > Hi Andreas, > > > > I have no

Re: Help needed for change of build system to gradle of package libsis-jhdf5-java

; > > > could you give some hints about the missing classes? > > > > On Tue, Aug 14, 2018 at 12:23:22PM +0200, olivier sallou wrote: > >> Le mar. 14 août 2018 à 11:32, Andreas Tille a écrit > : > >> > >>> A problem occurred evaluating root project 'lib

Re: Help needed for change of build system to gradle of package libsis-jhdf5-java

Le mar. 14 août 2018 à 11:32, Andreas Tille a écrit : > Hi, > > upstream of libsis-jhdf5-java[1] has switched to gradle in its new > version that is compatible with HDF5 1.10. I tried to adapt debian/rules > from previous manual build to buildsystem=gradle but got: > > ... > Parallel execution

Re: Help needed for libapfloat-java

- Andreas Tille <andr...@an3as.eu> a écrit : > On Wed, May 16, 2018 at 05:21:44PM +0200, Olivier Sallou wrote: > > > > I updated repo with a few fixes, but lib needs additional external > > dependencies not in Debian. I added info to d/changelog > > > >

Re: Help needed for libapfloat-java

On 05/16/2018 05:04 PM, Olivier Sallou wrote: > > On 05/16/2018 03:34 PM, Andreas Tille wrote: >> On Wed, May 16, 2018 at 02:40:31PM +0200, Emmanuel Bourg wrote: >>> Le 16/05/2018 à 14:30, Andreas Tille a écrit : >>> >>>> but my naive attempt to

Re: Help needed for libapfloat-java

> What error did you get? > No error but javac is not fired up at all and thus no JARs are created. > > Kind regards > > Andreas. > -- Olivier Sallou Univ Rennes, Inria, CNRS, IRISA Irisa, Campus de Beaulieu F-35042 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/3

Re: request for help: jhove

cii chars at specified locations. where are hosted package source? salsa, forge ? which team? Olivier > > >jhove 1.6+dfsg-1 is marked for autoremoval from testing on 2018-05-14 > > > >It is affected by these RC bugs: > >895761: jhove: FTBFS with java 9 > -- Olivier Sallo

Re: java9 javadoc errors (package htsjdk debianmed)

Le lun. 16 avr. 2018 à 18:05, olivier sallou <osal...@debian.org> a écrit : > Hi, > > I face several javadoc errors (ending with NullPointerException) with > openjdk 9 while updating package htsjdk. > > I saw on internet several bugs related to javadoc. > > Err

java9 javadoc errors (package htsjdk debianmed)

Hi, I face several javadoc errors (ending with NullPointerException) with openjdk 9 while updating package htsjdk. I saw on internet several bugs related to javadoc. Error ends with : javadoc: error - An exception occurred while building a component: TagInfo

Re: Bug#895765: igv: FTBFS with java 9

permits?) > > Kind regards > > Andreas. > > On Mon, Apr 16, 2018 at 10:17:57AM +0200, Olivier Sallou wrote: >> >> On 04/16/2018 09:32 AM, Bas Couwenberg wrote: >>> On 2018-04-16 08:18, Andreas Tille wrote: >>>> it seems something has changed with

Move of gradle from expiremental to sid

Hi, is there a plan to move soon Gradle from expiremental to sid ? Experimental version fixes some issues related to tests that would be useful for some of our packages (debianmed) Thanks Olivier

Re: Help needed: gradle + testng

On 10/31/2017 05:47 PM, Markus Koschany wrote: > I'm subscribed to debian-java. No need to CC me. sorry, was a reply all instead of reply... > > Am 31.10.2017 um 17:44 schrieb Olivier Sallou: >> the version I downloaded/tested with is gradle 4.3. >> Do you want I try wi

Re: Help needed: gradle + testng

On 10/31/2017 05:15 PM, Olivier Sallou wrote: > > On 10/31/2017 04:53 PM, Markus Koschany wrote: >> Am 31.10.2017 um 15:40 schrieb olivier sallou: >> [...] >> >>> any idea of what is wrong? >> Maybe it's a race condition. Have you tried building with --n

Re: Help needed: gradle + testng

On 10/31/2017 04:53 PM, Markus Koschany wrote: > Am 31.10.2017 um 15:40 schrieb olivier sallou: > [...] > >> any idea of what is wrong? > Maybe it's a race condition. Have you tried building with --no-parallel I tried debhelper directly, removing some arguements, to test manu

Re: Help needed: gradle + testng

On 10/31/2017 04:43 PM, Emmanuel Bourg wrote: > Le 31/10/2017 à 15:40, olivier sallou a écrit : > >> any idea of what is wrong? > I've seen this error too with another package and I had to disable the > tests. No idea what is causing this. well, this is what I plan to

Help needed: gradle + testng

Hi, when using testng with gradle on some packages (get same issue on multiple projects), test step fails with error: Executing task ':test' (up-to-date check took 0.0 secs) due to: Task.upToDateWhen is false. Cannot nest operations in the same thread. Each nested operation must run in its

scalatest + graddle

. upstream makes use of tags to filter some tests. Thanks Olivier On Wed, Oct 11, 2017 at 12:05:28PM +0200, Olivier Sallou wrote: > > Failure seems related to not finding the *tags* extension to Test. > Seems introduced by scalatest , one of the plugins loaded by graddle. > sc

Help needed with jdk9 and javac add-modules

Hi, with JDK 9 transition, the biojava4-live package fails to compile. It is linked to the javax.xml.bind module. To fix this I know I need to add to javac commands the java.se.ee module. However, as an Ant build.xlm file is used for compilation etc. , I do not find how to add this module in javac

Re: Help needed for tn-seqexplorer Java package

On 05/09/2017 01:20 PM, Andreas Tille wrote: > Hi Olivier, > > On Tue, May 09, 2017 at 11:46:51AM +0200, Olivier Sallou wrote: >>> $ tn-seqexplorer >>> Exception in thread "main" java.lang.NullPointerException >>> at sun.awt.S

Re: Help needed for tn-seqexplorer Java package

gt; Andreas. > > >> [1] https://anonscm.debian.org/git/debian-med/tn-seqexplorer.git >> [2] https://anonscm.debian.org/git/pkg-java/libexternalsortinginjava-java.git -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84

Re: Help needed for tn-seqexplorer Java package

- Mail original - > De: "Andreas Tille" > À: "Debian Med Project List" , "Debian Java > List" > Envoyé: Samedi 6 Mai 2017 09:23:27 > Objet: Help needed for tn-seqexplorer Java package > > Hi, > > I intend

Re: Default Java version for jar file in Debian

gt;> I am starring at the following: >> >> https://anonscm.debian.org/cgit/debian-med/gdcm.git/commit/?id=673e34b58867471a90e2fd70b30d442ecd16f505 >> >> and I believe the value should be set to 1.5 for all archs >> >> Right ? >> >> Thanks >> -- Olivier Sallou IRISA / University

Re: Autopkgtest fails when executable is link to JAR

- Mail original - > De: "Andreas Tille" > À: "Debian Java List" > Envoyé: Vendredi 29 Avril 2016 17:11:44 > Objet: Autopkgtest fails when executable is link to JAR > > Hi, > > I noticed that the autopkgtest for artfastqgenerator

Fwd: How to propagate mvn options to debhelper (Was: Need help to upgrade libnetlib-java package)

21:25:43 > Objet: How to propagate mvn options to debhelper (Was: Need help to upgrade > libnetlib-java package) > > On Fri, Apr 22, 2016 at 05:46:30PM +0200, Olivier Sallou wrote: > > >> I think this plugin is used in the maven "workflow", at install time >

Re: Need help to upgrade libnetlib-java package

On 04/21/2016 09:47 PM, Andreas Tille wrote: > On Wed, Apr 20, 2016 at 07:03:31AM +0200, Olivier Sallou wrote: >>> No, not really. My gut feeling too is, that packing oss-parent is not >>> required. To me it looks like something in the Debian specific setup of >&

Re: Need help to upgrade libnetlib-java package

- Mail original - > De: "Benjamin Mesing" > À: "Andreas Tille" , "Debian Java List" > , "Debian Med Packaging Team" > > Envoyé: Mardi 19 Avril 2016 22:29:12 > Objet: Re: Need

Re: [Help]: Bug#808593: htsjdk: FTBFS: [testng] FAILED: testHTTPNotExist

- Mail original - > De: "Vincent Danjean" > À: "Emmanuel Bourg" , "Andreas Tille" , > "Debian Java List" > , 808...@bugs.debian.org > Envoyé: Lundi 14 Mars 2016 21:20:11 > Objet: Re: [Help]:

lombok packaging with Ivy

Hi, has anyone already build package using Ivy (manage ant dependencies etc...) ?

mk-origtargz chokes on files other than tar or zip archives

Hi, I tried to package a freehep (freehep-graphics-base) library based on freehep-export debian repo. I tried to download the source based on watch and debian/orig-tar.sh (to get from svn based tag), but it fails with uscan about file not being a zip (and yes it isn't, it is a single file with

Bug 770608 on maven: planned upload date?

Hi, do you have a planned date to upload fix on maven (bug #770608): maven: FTBFS: maven-install-plugin or one of its dependencies could not be resolved This bug has as consequence that some other packages are marked for autoremoval due to dependencies. I had a way to override this on some of

Help required for webapp on Tomcat8

Hi, after receiving a bug to switch biomaj-watcher to Tomcat8, I made the required updates, but my webapp has deployment error on Tomcat 8. I ask here for help to ease the switch to v8 (from v6). I define a context xml with a docBase. I do not understand why it fails now any help would

Re: Help required for webapp on Tomcat8

On 12/15/2014 10:18 AM, Emmanuel Bourg wrote: Le 15/12/2014 10:00, Olivier Sallou a écrit : Caused by: java.lang.NullPointerException at org.apache.tomcat.util.scan.StandardJarScanner.process(StandardJarScanner.java:291) Hi Olivier, This looks like this bug: https

Re: Please help with Java lib

maxCompressedLength sould be available in a new version Olivier Kind regards Andreas. -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC

Re: Please help with Java lib

On 09/26/2014 09:48 AM, Andreas Tille wrote: Hi Olivier, On Fri, Sep 26, 2014 at 09:23:47AM +0200, Olivier Sallou wrote: On 09/25/2014 10:19 PM, Andreas Tille wrote: Hi Debian Java folks, it seems there is no real progress in this issue. Do you have any hint what to do. BTW (as in other

Re: cofoja vs libcofoja-java

2014-04-15 17:40 GMT+02:00 Andreas Tille ti...@debian.org: Hi Tony, On Mon, Apr 14, 2014 at 09:09:51PM -0700, tony mancill wrote: So if there are Debian Java team members who have some preference why not recommending this in a policy document? For people who are seldomly touching

Re: cofoja vs libcofoja-java

package. - cofoja has been packaged last year by Olivier Sallou for the Debian Java Team - libcofoja-java has been packaged last month by Diane Trout and Andreas Tille for the Debian Med Team What is the proper way to resolve this conflict? Emmanuel Bourg [1] http

Re: [Debian-med-packaging] Bug#715530: jai-core: Please build explicitly with OpenJDK 6

to get rid of OpenJDK-6 in Debian (in Jessie), so this is at best a temporary solution. I would highly recommend porting the package to (also) work with OpenJDK-7 instead. ~Niels -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg

junit issue

-- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-java-requ...@lists.debian.org

Re: junit issue

On 06/18/2013 03:06 PM, James Page wrote: Hi Olivier On 18/06/13 12:11, Olivier Sallou wrote: What is strange is it fails at junit time (via ant task) with error: java.lang.NoClassDefFoundError: junit/framework/JUnit4TestAdapterCache [junit] Running org.biojava3.core.sequence.DNATest

Re: Please help with Java issue where it seems to make a difference where JAR is installed

welcome Andreas. [1] http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=697604#15 [2] http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=697604#5 -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438

Re: Please help with Java issue where it seems to make a difference where JAR is installed

On 06/05/2013 04:27 PM, Olivier Sallou wrote: On 06/05/2013 01:34 PM, Andreas Tille wrote: Hi, according to a hint on debian-mentors it seems to be a good idea to drop a note here if Java is involved. Please CC me, because I'm not subscribed. Hi, sorry I missed previous mails about

libcommons-jexl2-java

Hi Emmanuel, I just tried to upload libcommons-jexl2-java from experimental to unstable now that maven-debian-helper has been updated on unstable. However I have a build error now during unit tests: Tests in error: testCalculations(org.apache.commons.jexl2.ArithmeticTest):

maven-debian-helper 1.6.1 to unstable

Hi, when do you plan to move maven-debian-helper 1.6.1 from experimental to unstable ? I need it for an other package to put it in unstable. Thanks Olivier -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438

Re: libcommons-jexl2-java

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 On 04/26/2013 08:24 PM, Emmanuel Bourg wrote: Le 26/04/2013 17:29, Olivier Sallou a écrit : I have updated from repo but it ends with an error with your update of rules. Is it any better if you update to maven-debian-helper 1.6.1 from

Re: libcommons-jexl2-java

On 04/25/2013 02:45 PM, Emmanuel Bourg wrote: Le 25/04/2013 12:53, Olivier Sallou a écrit : Hi Emmanuel, did you progress on jexl2 ? I did not see it on mentors.debian.net Hi Olivier, I uploaded the package on mentors, let me know how it works for you. Do you want to sponsor it? I am ok

Re: libcommons-jexl2-java

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 On 04/26/2013 09:56 AM, Emmanuel Bourg wrote: Hi Olivier, Le 26/04/2013 09:50, Olivier Sallou a écrit : I am ok to sponsor it. I will have a look at the package soon. I see however in lintian warnings that classpath is not set in jar

Re: libcommons-jexl2-java

/shared/maven-archiver/examples/classpath.html#aCustom). So you could remove version Emmanuel Bourg - -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83

Re: libcommons-jexl2-java

On 04/26/2013 12:13 PM, Niels Thykier wrote: On 2013-04-26 11:58, Olivier Sallou wrote: I have the latest version on SVN for debian dir. Olivier Which version of the maven helpers are you using? There was a bug in one of the maven helpers where it didn't deploy jars to /usr/share/java

Re: libcommons-jexl2-java

:= /usr/lib/jvm/default-java get-orig-source: uscan --download-version $(DEB_UPSTREAM_VERSION) --force-download --rename You may have missed the debian/libcommons-jexl2-java.classpath Emmanuel Bourg - -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES

Re: libcommons-jexl2-java

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 On 04/26/2013 01:20 PM, Emmanuel Bourg wrote: Le 26/04/2013 12:47, Olivier Sallou a écrit : You may have missed the debian/libcommons-jexl2-java.classpath Indeed, thank you. It works now. Do we want absolute or relative references

Re: libcommons-jexl2-java

it is really justified. Well, this is in Policy. Maybe Policy did not required it before. I would let Debian Java team answer for this. Olivier Emmanuel Bourg - -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id

Re: libcommons-jexl2-java

/commons-jexl.jar?: No such file or directory make: *** [binary-post-install/libcommons-jexl2-java] Error 1 dpkg-buildpackage: error: fakeroot debian/rules binary gave error exit status 2 Let me know how it works for you. Emmanuel Bourg - -- Olivier Sallou IRISA / University of Rennes 1

Re: libcommons-jexl2-java

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 On 04/26/2013 05:29 PM, Olivier Sallou wrote: On 04/26/2013 05:09 PM, Emmanuel Bourg wrote: Olivier, Please update your working copy, I've fixed the issues we identified (the missing classpath and the wrong jar in /usr/share/java). I've

libcommons-jexl2-java

Hi, do you know if there is someone working on libcommons-jexl2-java ? I saw a recent mail talking about it [0] and I need it for picard-tools package. [0] http://www.mail-archive.com/debian-java@lists.debian.org/msg17794.html thanks Olivier -- gpg key id: 4096R/326D8438

Re: Java packaging tools in Fedora?

Java packages are in JPackage repository instead of Fedora official repo. This leads to many issues on dependencies, often not present in Fedora repo. Olivier -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R

Clojure package missing

not exist or be a virtual resource). In squeeze, package is correct. I don't know if this is a mirroring/update/removal issue, or an upload issue [0] http://packages.debian.org/sid/clojure Olivier -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel

Re: Clojure package missing

Le 10/15/12 1:41 PM, Niels Thykier a écrit : On 2012-10-15 13:35, Olivier Sallou wrote: Hi, when looking at sid page for clojure [0], page exists but refer no binary nor source. It does not either specify maintainers etc... clojure1.4 is correct and specifies that debian-java

Re: need help with maven helper

is not modified. And files are installed in /usr/share/maven-repo/org/xerial/snappy/snappy-java/... Olivier Ludovic On 08/29/2012 11:07 AM, Olivier Sallou wrote: Hi, I need some help with maven helper. I need to rename the artifact id of the package library. In pom.xml, artifactId

need help with maven helper

/snappy-java/1.0.3-rc3/snappy-java-1.0.3-rc3.jar -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (keyring.debian.org) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438

Re: Fwd: any idea how to move dir in SVN?

-BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Le 7/10/12 7:59 AM, tony mancill a écrit : On 07/09/2012 02:31 AM, Niels Thykier wrote: On 2012-07-09 11:25, Olivier Sallou wrote: Hi, the package libbzip2-java is wrongly named libjbib2-java in SVN. Any idea on how to rename it on SVN

Fwd: any idea how to move dir in SVN?

Hi, the package libbzip2-java is wrongly named libjbib2-java in SVN. Any idea on how to rename it on SVN ? The svn mv would need to get the whole trunk/packages section, which I dont have and don't really want to download. Or if someone already has the whole section downloaded, would you mind

use of json.org in biojava3-ws

Hi, biojava3 makes use of json.org library. this library is not packaged in Debian. After a google, I saw old posts saying that library is (was?) not compliant regarding its license [0]. Though, after a quick look on their web site I do not see any restriction. Can anyone tell me is something

libquartz-java switch to libquartz2-java

Hi Mathieu, do you plan to switch libquartz-java to libquartz2-java to solve API incompatibility issue ? And if yes when do you plan to do so? I see library has already switched to testing, maybe I should have created a blocking bug after my first mail to prevent this, waiting to decide what to

Re: libquartz-java v2 has incomptabilities with previous version

:13:52 +0200 De : Olivier Sallou olivier.sal...@irisa.fr Répondre à : osal...@debian.org Pour : pkg-java-maintain...@lists.alioth.debian.org Hi, recent upload of quartz v2.1.4 in sid created some issue in one of my package and will certainly impact many other packages. The change

Re: Help with java package (beast-mcmc) needed

anyway Andreas. -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (pgp.mit.edu) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-java-requ

Re: Help with maven based package needed (dcm4che)

Med Project List debian-...@lists.debian.org Cc: Debian Java List debian-java@lists.debian.org Envoyé: Mardi 19 Avril 2011 18:12:28 Objet: Re: Help with maven based package needed (dcm4che) Hi Olivier, On Tue, Apr 19, 2011 at 06:00:16PM +0200, Olivier Sallou wrote: In the maven Jar creation

Re: How to apply maven build system (Was: How to use Debian packaged freehep instead of upstream provided freehep.jar)

Hi, the plugin must be under other tags. Example: build plugins plugin groupIdorg.apache.maven.plugins/groupId artifactIdmaven-compiler-plugin/artifactId configuration source1.5/source target1.5/target /configuration /plugin So your pom should look like: ?xml version=1.0 encoding=UTF-8?