Re: cellprofiler

2013-02-24 Thread Mathieu Malaterre
Hi Ivo ! If you are still interested in cellprofiler and ready to go through the python-libtiff stuff. Please assign the -closed- RFP back to you: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=647995#33 I am not interested in this package for the time being. Do you also want to

ITP: flexbar -- flexible barcode and adapter removal for sequencing platforms

2013-02-24 Thread Tony Travis
Package: wnpp Severity: wishlist Owner: Tony Travis tony.tra...@minke-informatics.co.uk * Package name: flexbar Version : 2.32-1 Upstream Author : Matthias Dodt matthias.d...@googlemail.com,Johannes T. Roehremail johannes.ro...@mdc-berlin.de * URL :

Re: cellprofiler

2013-02-24 Thread Ivo Maintz
Hi Mathieu, Mathieu Malaterre ma...@debian.org schrieb : Hi Ivo ! If you are still interested in cellprofiler and ready to go through the python-libtiff stuff. Please assign the -closed- RFP back to you: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=647995#33 ok I am not

Re: Possible GSoC idea: Cloud images for bioinformatics.

2013-02-24 Thread Tony Travis
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 22/02/13 07:50, Sascha Steinbiss wrote: [...] I would like to propose a bottom-up project with the goal of setting an infrastructure or workflow allowing one to build and use easily a Debian (Med) image where given bioinformatics tools are

aghermann-0.8.1 to fix #701241

2013-02-24 Thread andrei zavada
Hi Yaroslav Matthias, I'm pushing out aghermann-0.8.1 ahead of my usual dev cycle to close bug #701241, which is FTBSF with g++-4.8. Although this bug has been opened against an ancient version (0.6), it has indeed persisted until 0.8. I was able to compile 0.8.1 with 4.6, 4.7 and the latest

ITP: aragorn -- detect tRNA genes in nucleotide sequences

2013-02-24 Thread Sascha Steinbiss
Package: wnpp Severity: wishlist Owner: Sascha Steinbiss sa...@tetrinetsucht.de * Package name: aragorn Version : 1.2.36 Upstream Author : Dean Laslett gaiaqu...@gmail.com, Bjorn Canback bcanb...@acgt.se * URL : http://mbio-serv2.mbioekol.lu.se/ARAGORN/ * License