December is bug squashing month

2023-12-01 Thread Andreas Tille
Hi folks, until 2021 we had the nice bug squashing advent calendar manually maintained by Thorsten Alteholz. Since Thorsten confirmed that this manual work is draining time from his other tasks for Debian mainly his ftpmaster task. I'd like to thank Thorsten again for all his effort - even mor

Re: Debian Med video conference tomorrow, third Sunday of December 2022-12-18 18:00 UTC

2022-12-17 Thread Andreas Tille
Hi, this is the call for the next video conference of the Debian Med team that are an established means to organise the tasks inside our team. In last conference we decided about a new scheme to find a date: First Friday of a month Third Sunday of a month The rationale is that several

Debian Med video conference tomorrow, first Friday of December 2022-12-02 18:00 UTC

2022-12-01 Thread Andreas Tille
Hi, this is the call for the next video conference of the Debian Med team that are an established means to organise the tasks inside our team. In last conference we decided about a new scheme to find a date: First Friday of a month Third Sunday of a month The rationale is that several

December is bug squashing month

2022-11-30 Thread Andreas Tille
Hi folks, until 2021 we had the nice bug squashing advent calendar manually maintained by Thorsten Alteholz. Since last year he confirmed that this manual work is draining time from his other tasks for Debian mainly his ftpmaster task. I'd like to thank Thorsten again for all his effort - even

Re: December 2020 bug squashing

2020-11-29 Thread Andreas Tille
ks a lot for your Advent calendar effort. Everybody out there who is not familiar with the Christian tradition of an Advent calendar is perfectly welcome to fix as many issues as possible in the days from 1. to 24. December. I'd like to add / announce another new link that is part of the Blends effor

December 2020 bug squashing

2020-11-29 Thread Thorsten Alteholz
Hi everybody, in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls. The days are closing in, the year is drawing to an end and we should think of all those, that are not around with their own kind. Again, during the last few

Please fix more bugs (Was: December 2019 bug squashing)

2019-12-05 Thread Andreas Tille
Dear team members, I love this initiative by Thorsten since its a great motivation to check the list of our bugs. I realise all the time that there are *really* simple ones. Some of them just need some asking back to the bug reporter and realise that the issue is just solved. Others are

December 2019 bug squashing

2019-11-30 Thread Thorsten Alteholz
Hi everybody, in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls. The days are closing in, the year is drawing to an end and we should think of all those, that are not around with their own kind. Again, during the last few

Re: December

2018-12-12 Thread Andreas Tille
Hi, thanks a lot Thorsten for your yearly Advent calendar. Its quite a motivation to tackle also older bugs. I tried hard to close one bug per day (but did not managed on 9.+10. due to real life tasks). I would have loved if other members of the team would have taken over. ;-) Everybody please

December

2018-11-30 Thread Thorsten Alteholz
Hi everybody, it is incredible but this time of the year has come again and in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls. The days are closing in, the year is drawing to an end and we should think of all those, that are

Re: December

2017-12-25 Thread Thorsten Alteholz
Hi everybody, advent is over and the calendar[1] has been filled with lots of entries. All in all 105 bugs have been closed, that is the second highest number after the all time record of 150 two years ago. So congratulations to all participants for a great job! Though some new bugs

We *really* need to fix more bugs! (Was: Bug squashing in December (Was: December))

2017-12-12 Thread Andreas Tille
Hi again, I admit I didn't noticed the expected bump in a higher bug fixing activity. But we *really* need this. I've personally set a one bug per day policy for myself and on close to all days I squashed more than this. The point is not that I want to demonstrate how busy I am but how *easy*

Re: December: tophat

2017-12-06 Thread Fabian Klötzl
On 06.12.2017 16:20, Andreas Tille wrote: > Hi Fabian, > > On Wed, Dec 06, 2017 at 03:53:09PM +0100, Fabian Klötzl wrote: >> On 04.12.2017 17:33, Andreas Tille wrote: >>> >>> Thanks to the test suite we now know that the issue is not solved yet: >>> >>> $ sh run-unit-test >> >> That should be

Re: December: tophat

2017-12-06 Thread Andreas Tille
Hi Fabian, On Wed, Dec 06, 2017 at 03:53:09PM +0100, Fabian Klötzl wrote: > On 04.12.2017 17:33, Andreas Tille wrote: > > > > Thanks to the test suite we now know that the issue is not solved yet: > > > > $ sh run-unit-test > > That should be done with my recent commit; The new samtools

Re: December: tophat

2017-12-06 Thread Fabian Klötzl
Hi Andreas, On 04.12.2017 17:33, Andreas Tille wrote: > On Mon, Dec 04, 2017 at 02:09:48PM +0100, Fabian Klötzl wrote: >> I just pushed some changes to build tophat with our version of libbam. >> Not sure if the previously mentioned issue in [1] is fixed; can't test, > > Thanks to the test suite

Bug squashing in December (Was: December)

2017-12-06 Thread Andreas Tille
Hi Debian Med fans, may be the subject of the original mail was not catchy enough and people did not realised that we are doing a 24 day internet wide bug squashing party. Believers in different tradition than advent are welcome to join as well, for sure. I admit I have not realised a dramatic

Re: [Debian-med-packaging] Bug#780816: December: tophat

2017-12-04 Thread Fabian Klötzl
On 04.12.2017 17:33, Andreas Tille wrote: > Thanks to the test suite we now know that the issue is not solved yet: > > $ sh run-unit-test > > [2017-12-04 17:28:54] Beginning TopHat run (v2.1.1) > --- > [2017-12-04 17:28:54] Checking for Bowtie >

Re: December: tophat

2017-12-04 Thread Andreas Tille
Hi Fabian, thanks for working on this. On Mon, Dec 04, 2017 at 02:09:48PM +0100, Fabian Klötzl wrote: > I just pushed some changes to build tophat with our version of libbam. > Not sure if the previously mentioned issue in [1] is fixed; can't test, Thanks to the test suite we now know that the

December: tophat

2017-12-04 Thread Fabian Klötzl
Hi all, I just pushed some changes to build tophat with our version of libbam. Not sure if the previously mentioned issue in [1] is fixed; can't test, because my cowbuild just broke. :( Best, Fabian [1]: https://lists.debian.org/debian-med/2014/10/msg4.html

Re: December

2017-12-01 Thread Andreas Tille
Hi Aaron, On Fri, Dec 01, 2017 at 10:56:57AM -0500, Aaron M. Ucko wrote: > > Hi, Andreas. Although Cn3D++ comes from the same overarching tree > (NCBI's C++ Toolkit) as BLAST+, it is a separate project. The packaging > work done for BLAST+ would make for a decent starting point, though. Since

Re: December

2017-12-01 Thread Aaron M. Ucko
Andreas Tille writes: >> I would like to mention #225651 [5] here, as this seems to be the oldest one >> that needs some help (at least a proper closing). > > Pinging Aaron explicitly to refresh his statement given several years ago. Hi, Andreas. Although Cn3D++ comes from

Re: December

2017-12-01 Thread Andreas Tille
Hi again, after having fixed the next bug #883047 - hey it was tagged patch and the upload had a diff as simple as diff --git a/debian/changelog b/debian/changelog index d9eab55..2e9a79b 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,10 +1,19 @@ -canu (1.6+dfsg-2) UNRELEASED;

Re: December

2017-11-30 Thread Andreas Tille
Hi everybody, its really that simple to close a bug which I'm doing here without a line of code closing my first bug in this mail after having checked that zstd has hit backports and adding "882244-d...@bugs.debian.org" to the list of receivers of this mail. Not all bugs are *that* simple to

December

2017-11-30 Thread Thorsten Alteholz
Hi everybody, this time of the year has come again and in order to carry on a tradition (it is the seventh time this year), I want to remind everybody of our combined efforts to take care of some poor souls. The days are closing in, the year is drawing to an end and we should think of all

Re: December

2016-12-26 Thread Thorsten Alteholz
Hi everybody, advent is over and the calender[1] has been filled with lots of entries. All in all 95 bugs have been closed, that is the second highest number after the all time record of 150 last year. So congratulations to all participants for a great job! Though some new bugs appeared

Re: December

2016-12-01 Thread Andreas Tille
On Wed, Nov 30, 2016 at 08:54:57AM +0100, Andreas Tille wrote: > BTW, I hope closed ITPs will be counted as well - finally we have a team > member in the ftpmaster team. :-P And for sure ROM requests which enable migration of packages to testing ... :-) Kind regards Andreas. --

Re: December

2016-11-29 Thread Andreas Tille
On Tue, Nov 29, 2016 at 07:18:27PM +0100, Thorsten Alteholz wrote: > Hi everybody, > > how time flies! This time of the year has come again and in order to carry > on a tradition, I want to remind everybody of our combined efforts to take > care of some poor souls. > ... BTW, I hope closed ITPs

Re: December

2016-11-29 Thread Andreas Tille
On Tue, Nov 29, 2016 at 07:18:25PM +, Ghislain Vaillant wrote: > > If I have fixes pending for these packages, should I push one a day to avoid > holes in your advent calendar ;-) No, you should try to fix as much bugs per day and fiy other bugs the next day. :-P Any contribution is

Re: December

2016-11-29 Thread Ghislain Vaillant
On 29/11/16 18:40, Andreas Tille wrote: Hi Thorsten, On Tue, Nov 29, 2016 at 07:18:27PM +0100, Thorsten Alteholz wrote: how time flies! This time of the year has come again and in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls.

Re: December

2016-11-29 Thread Andreas Tille
Hi Thorsten, On Tue, Nov 29, 2016 at 07:18:27PM +0100, Thorsten Alteholz wrote: > how time flies! This time of the year has come again and in order to carry > on a tradition, I want to remind everybody of our combined efforts to take > care of some poor souls. Thanks a lot again for this great

December

2016-11-29 Thread Thorsten Alteholz
Hi everybody, how time flies! This time of the year has come again and in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls. The days are closing in, the year is drawing to an end and we should think of all those, that are not

Re: December

2015-12-25 Thread Thorsten Alteholz
Hi everybody, Christmas finally arrived and the Advent calendar has been filled with lots of closed bugs. I am really impressed with the achievement of all participants. After the rather small quantity last year, the incredible number of 150 bugs have been closed this year! Thanks alot! Now

Re: December

2015-12-25 Thread Andreas Tille
Hi Thorsten, thanks a lot as well to all who joined the bug squshing calendar and to you for the nice motivation to close more than 50% of our open bugs! That's really great - I think we should continuously keep an eye on the RC bugs in any case since we will see the freeze for the next Debian

Re: December

2015-12-01 Thread Andreas Tille
On Tue, Dec 01, 2015 at 03:41:50PM +0100, Gert Wollny wrote: > Hello, > > On Tue, > > > Maybe some of the "won't fix" can be resolved as well. > > I consider #798165, #797651, #805360, #705270 to be such cases. They > all relate to mummy and activit.net. As far as i can see both packages >

December

2015-12-01 Thread Thorsten Alteholz
Hi everybody, the time has come and in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls at this time of the year. The days are closing in, the year is drawing to an end and we should think of all those, that are not around

Re: December

2015-12-01 Thread Gert Wollny
Hello, On Tue, > Maybe some of the "won't fix" can be resolved as well. I consider #798165, #797651, #805360, #705270 to be such cases. They all relate to mummy and activit.net. As far as i can see both packages are no longer used to generated .NET bindings (i.e. in gdcm Mathieu provided the

Re: December

2015-12-01 Thread Andreas Tille
Hi Thorsten, On Tue, Dec 01, 2015 at 01:45:20PM +0100, Thorsten Alteholz wrote: > As soon as I get the notice of a closed case I will record that in our > Advent calendar[4]. Thanks a lot for your all year quality assurance push in this cute form. This is really appreciated. For NEWCOMERS

December is near

2014-11-26 Thread Thorsten Alteholz
Hi, in order to carry on a tradition, I want to remind everybody of our combined efforts to take care of some poor souls at this time of the year. The days are closing in, the year is drawing to an end and we should think of all those, that are not around with their own kind. Again, during

The 20th International Conference on Genome Informatics, December 2009, Japan.

2009-07-10 Thread Charles Plessy
Hello everybody, The 20th International Conference on Genome Informatics will be held at PACIFICO YOKOHAMA, Japan on December 14-16, 2009. Their call for poster and software demonstrations is open until October 1st. http://giw.ims.u-tokyo.ac.jp/giw2009/cfposter.html See you there ? -- Charles