Re: New version of ncbi-blast+ available

Andreas Tille writes: > Thanks a lot for working on this. I just wonder whether there is some > solution for #792510 which is open for 18month and of severity > important. I accidentally lost track of that bug (sorry!), but will try to find time to take another look. --

Re: New version of ncbi-blast+ available

Hi Aaron, On Wed, Dec 07, 2016 at 10:56:33AM -0500, Aaron M. Ucko wrote: > "Aaron M. Ucko" writes: > > > to follow up with ncbi-tools6 tomorrow. > > Done as planned, so we're now pretty much set, though I'll want to make > one more ncbi-blast+ upload to disable a strict GNU

Re: New version of ncbi-blast+ available

"Aaron M. Ucko" writes: > to follow up with ncbi-tools6 tomorrow. Done as planned, so we're now pretty much set, though I'll want to make one more ncbi-blast+ upload to disable a strict GNU TLS version check, as already done for ncbi-tools6:

Re: New version of ncbi-blast+ available

Andreas Tille writes: > Having some more testing in unstable before the freeze > might be something we should gain for. Certainly, but the remaining changes I have planned for ncbi-tools6 are relatively formal, so testing what's already in unstable should be sufficient for

Re: New version of ncbi-blast+ available

On Mon, Dec 05, 2016 at 09:50:37AM -0500, Aaron M. Ucko wrote: > > My understanding is that going through NEW is necessary only when > *adding* binary packages; dropping the old -dbg packages certainly > didn't require it. As such, ncbi-blast+ might have to go through NEW > when it takes over

Re: New version of ncbi-blast+ available

Andreas Tille writes: > If you ask me under this cricumstances I'd upload even with FTBFS at > Hurd since the package needs to pass new if you remove the binary > package blast2. While it resides in new the FTBFS can be solved and > another upload can fix it. My understanding

Re: New version of ncbi-blast+ available

Hi Aaron, On Sun, Dec 04, 2016 at 11:24:58PM -0500, Aaron M. Ucko wrote: > > Thanks for taking care of this upload! If you don't mind, I'd like to > prepare a team upload in the near future to take care of two changes: > > * Enabling support for accessing NCBI servers via HTTPS. (It should >

New version of ncbi-blast+ available

Hi Aaron and Olivier, version 2.5.0 is available since some time. Do you intend to upload the package in the near future? Kind regards Andreas. -- http://fam-tille.de

Re: New version of ncbi-blast+ available

- Mail original - > De: "Andreas Tille" <andr...@an3as.eu> > À: "Olivier Sallou" <olivier.sal...@irisa.fr> > Cc: debian-med@lists.debian.org > Envoyé: Mercredi 3 Août 2016 11:25:57 > Objet: Re: New version of ncbi-blast+ available > &

Re: New version of ncbi-blast+ available

On Wed, Aug 03, 2016 at 11:09:17AM +0200, Olivier Sallou wrote: > > Great. May be I simply messed up the patches. Could you push (or even > > upload - may be after running the autopkgtest)? > > autopkgtest si not automatically ran during build ? No, its no build time test (may be its a good

Re: New version of ncbi-blast+ available

- Mail original - > De: "Andreas Tille" <andr...@an3as.eu> > À: debian-med@lists.debian.org > Envoyé: Mercredi 3 Août 2016 11:00:51 > Objet: Re: New version of ncbi-blast+ available > > On Wed, Aug 03, 2016 at 10:42:14AM +0200, Olivier Sallou wrote: >

Re: New version of ncbi-blast+ available

On Wed, Aug 03, 2016 at 10:42:14AM +0200, Olivier Sallou wrote: > > I just imported the new tarball and tried to refresh the patches. Some > > small adaptions were needed but I'd prefer you do these with a deeper > > understanding. I became unsure whether I might have mixed up with the > > wrong

Re: New version of ncbi-blast+ available

- Mail original - > De: "Andreas Tille" <andr...@an3as.eu> > À: debian-med@lists.debian.org > Cc: "Aaron M. Ucko" <u...@debian.org> > Envoyé: Mardi 2 Août 2016 22:54:16 > Objet: Re: New version of ncbi-blast+ available > > Hi Aaron, &

Re: New version of ncbi-blast+ available

Hi Aaron, On Tue, Aug 02, 2016 at 04:03:48PM -0400, Aaron M. Ucko wrote: > > I gonna have a look, but this is really a build modification, I may need > > Aaron help, there build system is really complex. > > I'll be happy to take a look. > > Andreas, can I pull your preliminary changes from

Re: New version of ncbi-blast+ available

Olivier Sallou writes: > I gonna have a look, but this is really a build modification, I may need > Aaron help, there build system is really complex. I'll be happy to take a look. Andreas, can I pull your preliminary changes from anywhere, or should I recreate them

Re: New version of ncbi-blast+ available

- Mail original - > De: "Andreas Tille" <andr...@an3as.eu> > À: "Debian Med Project List" <debian-med@lists.debian.org>, "Olivier Sallou" > <osal...@debian.org>, "Aaron M. Ucko" > <u...@debian.org> > E

New version of ncbi-blast+ available

Hi Aaron and Olivier, there is a new version of ncbi-blast+ available. I wonder whether you might be able to upgrade the package in the next couple of days. If yes, I'd delay the upload of the old version which now has autopkgtest (I did not yet verified its functionality). I imported the new