[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille pushed to branch master at Debian Med / community / helper-scripts Commits: f1997e67 by Andreas Tille at 2020-04-09T01:44:46+00:00 automatic update - - - - - 2 changed files: - debian-med-tests.txt - outdated_med-packages.txt Changes: =

[med-svn] [Git][med-team/sumaclust][master] 2 commits: Reading ACGT-only sequences safely

Pierre Gruet pushed to branch master at Debian Med / sumaclust Commits: b68b92e6 by Pierre Gruet at 2020-04-08T21:49:04+02:00 Reading ACGT-only sequences safely Better handling of line changes - - - - - 1aa21e7d by Pierre Gruet at 2020-04-08T21:57:46+02:00 Updating changelog - - - - - 3

[med-svn] [Git][med-team/trinculo][master] 2 commits: Cleanup changelog for initial upload

Andreas Tille pushed to branch master at Debian Med / trinculo Commits: e8de7401 by Andreas Tille at 2020-04-08T21:21:39+02:00 Cleanup changelog for initial upload - - - - - 0aa2665b by Andreas Tille at 2020-04-08T21:23:27+02:00 Upload to new - - - - - 1 changed file: - debian/changelog

[med-svn] [Git][med-team/salmon][master] Add link to source of https://github.com/COMBINE-lab/pufferfish

Andreas Tille pushed to branch master at Debian Med / salmon Commits: 4d1c5896 by Andreas Tille at 2020-04-08T21:06:55+02:00 Add link to source of https://github.com/COMBINE-lab/pufferfish - - - - - 1 changed file: - debian/changelog Changes: =

[med-svn] [Git][med-team/sra-sdk][master] Update metadata - added ref to conda

Steffen Möller pushed to branch master at Debian Med / sra-sdk Commits: 01bae705 by Steffen Möller at 2020-04-08T18:46:56+00:00 Update metadata - added ref to conda - - - - - 1 changed file: - debian/upstream/metadata Changes: =

[med-svn] [Git][med-team/trinculo][master] Add manpage

Pranav Ballaney pushed to branch master at Debian Med / trinculo Commits: b38e14a3 by Pranav Ballaney at 2020-04-09T00:04:02+05:30 Add manpage - - - - - 2 changed files: - + debian/manpages - + debian/trinculo.1 Changes: = debian/manpages

[med-svn] [Git][med-team/python-tinyalign] Pushed new tag debian/0.2-5

Tony Mancill pushed new tag debian/0.2-5 at Debian Med / python-tinyalign -- View it on GitLab: https://salsa.debian.org/med-team/python-tinyalign/-/tree/debian/0.2-5 You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/python-tinyalign][master] 2 commits: Set "Rules-Requires-Root: no" in debian/control

Tony Mancill pushed to branch master at Debian Med / python-tinyalign Commits: 5b31f390 by tony mancill at 2020-04-08T09:22:55-07:00 Set Rules-Requires-Root: no in debian/control - - - - - d70a37d7 by tony mancill at 2020-04-08T09:29:01-07:00 prepare changelog for upload to unstable - - - -

[med-svn] [Git][med-team/libbio-tradis-perl][master] 8 commits: routine-update: Standards-Version: 4.5.0

Michael R. Crusoe pushed to branch master at Debian Med / libbio-tradis-perl Commits: 73e4e22a by Michael R. Crusoe at 2020-04-08T18:57:22+02:00 routine-update: Standards-Version: 4.5.0 - - - - - d2a0d2cd by Michael R. Crusoe at 2020-04-08T18:57:25+02:00 routine-update: Add salsa-ci file - -

[med-svn] [Git][med-team/pufferfish][pristine-tar] pristine-tar data for pufferfish_1.1.0.orig.tar.xz

Michael R. Crusoe pushed to branch pristine-tar at Debian Med / pufferfish Commits: a2c6bfcb by Michael R. Crusoe at 2020-03-01T16:32:59+01:00 pristine-tar data for pufferfish_1.1.0.orig.tar.xz - - - - - 2 changed files: - + pufferfish_1.1.0.orig.tar.xz.delta - +

[med-svn] [Git][med-team/pufferfish] Pushed new tag upstream/1.1.0

Michael R. Crusoe pushed new tag upstream/1.1.0 at Debian Med / pufferfish -- View it on GitLab: https://salsa.debian.org/med-team/pufferfish/-/tree/upstream/1.1.0 You're receiving this email because of your account on salsa.debian.org. ___

[med-svn] [Git][med-team/pufferfish][master] 16 commits: tweak setcover

Michael R. Crusoe pushed to branch master at Debian Med / pufferfish Commits: 7f94c769 by Michael R. Crusoe at 2020-02-22T13:54:23+01:00 tweak setcover - - - - - 90b8271a by Michael R. Crusoe at 2020-02-23T19:22:34+01:00 Fix build - - - - - e44594ef by Michael R. Crusoe at

[med-svn] [Git][med-team/pufferfish][upstream] New upstream version 1.1.0

Michael R. Crusoe pushed to branch upstream at Debian Med / pufferfish Commits: 1d581d72 by Michael R. Crusoe at 2020-03-01T16:32:56+01:00 New upstream version 1.1.0 - - - - - 30 changed files: - − bin/fixFasta - include/ProgOpts.hpp - include/PuffAligner.hpp - include/Util.hpp -

[med-svn] [Git][med-team/trinityrnaseq][master] r-bioc-edger is back!

Michael R. Crusoe pushed to branch master at Debian Med / trinityrnaseq Commits: d1a9ff02 by Michael R. Crusoe at 2020-04-08T18:30:50+02:00 r-bioc-edger is back! - - - - - 2 changed files: - debian/changelog - debian/control Changes: =

[med-svn] [Git][med-team/augur][upstream] New upstream version 7.0.2

Andreas Tille pushed to branch upstream at Debian Med / augur Commits: 3242c256 by Andreas Tille at 2020-04-08T15:27:14+02:00 New upstream version 7.0.2 - - - - - 30 changed files: - + .coveragerc - .gitignore - .travis.yml - CHANGES.md - + DEV_DOCS.md - README.md - augur/__version__.py -

[med-svn] [Git][med-team/augur][pristine-tar] pristine-tar data for augur_7.0.2.orig.tar.gz

Andreas Tille pushed to branch pristine-tar at Debian Med / augur Commits: 373413b1 by Andreas Tille at 2020-04-08T15:28:17+02:00 pristine-tar data for augur_7.0.2.orig.tar.gz - - - - - 2 changed files: - + augur_7.0.2.orig.tar.gz.delta - + augur_7.0.2.orig.tar.gz.id Changes:

[med-svn] [Git][med-team/augur] Pushed new tag upstream/7.0.2

Andreas Tille pushed new tag upstream/7.0.2 at Debian Med / augur -- View it on GitLab: https://salsa.debian.org/med-team/augur/-/tree/upstream/7.0.2 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/augur][master] 7 commits: New upstream version 7.0.2

Andreas Tille pushed to branch master at Debian Med / augur Commits: 3242c256 by Andreas Tille at 2020-04-08T15:27:14+02:00 New upstream version 7.0.2 - - - - - cae9945d by Andreas Tille at 2020-04-08T15:27:14+02:00 routine-update: New upstream version - - - - - 2a3fefa4 by Andreas Tille at

[med-svn] [Git][med-team/augur] Pushed new tag debian/7.0.2-1

Andreas Tille pushed new tag debian/7.0.2-1 at Debian Med / augur -- View it on GitLab: https://salsa.debian.org/med-team/augur/-/tree/debian/7.0.2-1 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/trinityrnaseq][master] 9 commits: adapt to new naming format

Michael R. Crusoe pushed to branch master at Debian Med / trinityrnaseq Commits: 3775625c by Michael R. Crusoe at 2020-04-08T17:27:33+02:00 adapt to new naming format - - - - - 8f27c705 by Michael R. Crusoe at 2020-04-08T17:27:35+02:00 New upstream version 2.8.6+dfsg - - - - - b3e95494 by

[med-svn] [Git][med-team/odil][upstream] New upstream version 0.12.0

Julien Lamy pushed to branch upstream at Debian Med / odil Commits: 98e181a9 by Julien Lamy at 2020-04-07T22:16:31+00:00 New upstream version 0.12.0 - - - - - 30 changed files: - .bumpversion.cfg - CMakeLists.txt - documentation/installation/index.rst - src/odil/Element.cpp -

[med-svn] [Git][med-team/odil][pristine-tar] pristine-tar data for odil_0.12.0.orig.tar.gz

Julien Lamy pushed to branch pristine-tar at Debian Med / odil Commits: 80181a23 by Julien Lamy at 2020-04-07T22:16:39+00:00 pristine-tar data for odil_0.12.0.orig.tar.gz - - - - - 2 changed files: - + odil_0.12.0.orig.tar.gz.delta - + odil_0.12.0.orig.tar.gz.id Changes:

[med-svn] [Git][med-team/odil][master] 3 commits: New upstream version 0.12.0

Julien Lamy pushed to branch master at Debian Med / odil Commits: 98e181a9 by Julien Lamy at 2020-04-07T22:16:31+00:00 New upstream version 0.12.0 - - - - - 1939adcf by Julien Lamy at 2020-04-07T22:16:39+00:00 Update upstream source from tag upstream/0.12.0 Update to upstream version 0.12.0

[med-svn] [Git][med-team/odil] Pushed new tag upstream/0.12.0

Julien Lamy pushed new tag upstream/0.12.0 at Debian Med / odil -- View it on GitLab: https://salsa.debian.org/med-team/odil/-/tree/upstream/0.12.0 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/mypy][master] release 0.770-2 to unstable. Thank you Etienne Mollier!

Michael R. Crusoe pushed to branch master at Debian Med / mypy Commits: 6c5647dd by Michael R. Crusoe at 2020-04-08T10:12:35+02:00 release 0.770-2 to unstable. Thank you Etienne Mollier! - - - - - 1 changed file: - debian/changelog Changes: =

[med-svn] [Git][med-team/mypy] Pushed new tag debian/0.770-2

Michael R. Crusoe pushed new tag debian/0.770-2 at Debian Med / mypy -- View it on GitLab: https://salsa.debian.org/med-team/mypy/-/tree/debian/0.770-2 You're receiving this email because of your account on salsa.debian.org. ___ debian-med-commit

[med-svn] [Git][med-team/simde][pristine-tar] pristine-tar data for simde_0.0.0.git.20200408.orig.tar.xz

Michael R. Crusoe pushed to branch pristine-tar at Debian Med / simde Commits: 813f1f50 by Michael R. Crusoe at 2020-04-08T15:21:02+02:00 pristine-tar data for simde_0.0.0.git.20200408.orig.tar.xz - - - - - 2 changed files: - + simde_0.0.0.git.20200408.orig.tar.xz.delta - + simde_0.0.0.git

[med-svn] [Git][med-team/simde] Pushed new tag upstream/0.0.0.git.20200408

Michael R. Crusoe pushed new tag upstream/0.0.0.git.20200408 at Debian Med / simde -- View it on GitLab: https://salsa.debian.org/med-team/simde/-/tree/upstream/0.0.0.git.20200408 You're receiving this email because of your account on salsa.debian.org

[med-svn] [Git][med-team/fieldbioinformatics][master] 4 commits: Remove accidentally included backupfile from emacs(?)

Andreas Tille pushed to branch master at Debian Med / fieldbioinformatics Commits: ab136665 by Andreas Tille at 2020-04-08T14:41:53+02:00 Remove accidentally included backupfile from emacs(?) - - - - - f1462993 by Andreas Tille at 2020-04-08T14:46:00+02:00 cme fix dpkg-control - - - - -

[med-svn] [Git][med-team/python-deeptools][pristine-tar] pristine-tar data for python-deeptools_3.4.2.orig.tar.xz

Steffen Möller pushed to branch pristine-tar at Debian Med / python-deeptools Commits: cc43bee5 by Steffen Moeller at 2020-04-08T12:16:36+02:00 pristine-tar data for python-deeptools_3.4.2.orig.tar.xz - - - - - 2 changed files: - + python-deeptools_3.4.2.orig.tar.xz.delta - +

[med-svn] [Git][med-team/python-deeptools] Pushed new tag upstream/3.4.2

Steffen Möller pushed new tag upstream/3.4.2 at Debian Med / python-deeptools -- View it on GitLab: https://salsa.debian.org/med-team/python-deeptools/-/tree/upstream/3.4.2 You're receiving this email because of your account on salsa.debian.org.

[med-svn] [Git][med-team/python-deeptools] Pushed new tag debian/3.4.2-1

Steffen Möller pushed new tag debian/3.4.2-1 at Debian Med / python-deeptools -- View it on GitLab: https://salsa.debian.org/med-team/python-deeptools/-/tree/debian/3.4.2-1 You're receiving this email because of your account on salsa.debian.org.

[med-svn] [Git][med-team/python-questplus] Pushed new tag debian/2019.4-3

Andreas Tille pushed new tag debian/2019.4-3 at Debian Med / python-questplus -- View it on GitLab: https://salsa.debian.org/med-team/python-questplus/-/tree/debian/2019.4-3 You're receiving this email because of your account on salsa.debian.org.

[med-svn] [Git][med-team/python-questplus][master] 2 commits: routine-update: Rules-Requires-Root: no

Andreas Tille pushed to branch master at Debian Med / python-questplus Commits: 5899a6f8 by Andreas Tille at 2020-04-08T11:26:17+02:00 routine-update: Rules-Requires-Root: no - - - - - 7cd61c86 by Andreas Tille at 2020-04-08T11:30:57+02:00 Upload to unstable - - - - - 2 changed files: -

[med-svn] [Git][med-team/tophat][master] Mention removal of the package and hint to more recent version than the last packaged one

Andreas Tille pushed to branch master at Debian Med / tophat Commits: ab51f37c by Andreas Tille at 2020-04-08T09:08:04+00:00 Mention removal of the package and hint to more recent version than the last packaged one - - - - - 1 changed file: - debian/changelog Changes: