Andreas Tille pushed to branch master at Debian Med / genometester
Commits: c48da61f by Andreas Tille at 2018-05-29T16:16:26+02:00 Initial packaging - - - - - 8 changed files: - + debian/changelog - + debian/compat - + debian/control - + debian/copyright - + debian/rules - + debian/source/format - + debian/upstream/metadata - + debian/watch Changes: ===================================== debian/changelog ===================================== --- /dev/null +++ b/debian/changelog @@ -0,0 +1,5 @@ +genometester (4.0-1) UNRELEASED; urgency=medium + + * Initial release (Closes: #<bug>) + + -- Andreas Tille <ti...@debian.org> Tue, 29 May 2018 16:15:40 +0200 ===================================== debian/compat ===================================== --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +11 ===================================== debian/control ===================================== --- /dev/null +++ b/debian/control @@ -0,0 +1,24 @@ +Source: genometester +Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> +Uploaders: Andreas Tille <ti...@debian.org> +Section: science +Priority: optional +Build-Depends: debhelper (>= 11~) +Standards-Version: 4.1.4 +Vcs-Browser: https://salsa.debian.org/med-team/genometester +Vcs-Git: https://salsa.debian.org/med-team/genometester.git +Homepage: https://github.com/bioinfo-ut/GenomeTester4 + +Package: genometester +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends} +Description: toolkit for performing set operations on k-mer lists + Toolkit for performing set operations - union, intersection and + complement - on k-mer lists. + . + GenomeTester4 toolkit, which contains a novel tool GListCompare for + performing union, intersection and complement (difference) set + operations on k-mer lists. It contains examples of how these + general operations can be combined to solve a variety of biological + analysis tasks. ===================================== debian/copyright ===================================== --- /dev/null +++ b/debian/copyright @@ -0,0 +1,16 @@ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: <pkg> +Source: <path_to_download> +Comment: **** Before manually editing this file you should give **** + scan-copyrights + **** available in cme + lib-config-model-dpkg-perl **** + **** package a try. For existing copyright files try **** + cme update dpkg-copyright + +Files: * +Copyright: © 20xx-20yy <upstream> +License: <license> + +Files: debian/* +Copyright: © 2018 maintainername <maintai...@e.mail> +License: <license> ===================================== debian/rules ===================================== --- /dev/null +++ b/debian/rules @@ -0,0 +1,19 @@ +#!/usr/bin/make -f + +# DH_VERBOSE := 1 +export LC_ALL=C.UTF-8 + +include /usr/share/dpkg/default.mk +# this provides: +# DEB_SOURCE: the source package name +# DEB_VERSION: the full version of the package (epoch + upstream vers. + revision) +# DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision +# DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch +# DEB_VERSION_UPSTREAM: the package's upstream version +# DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog + +# for hardening you might like to uncomment this: +# export DEB_BUILD_MAINT_OPTIONS=hardening=+all + +%: + dh $@ ===================================== debian/source/format ===================================== --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) ===================================== debian/upstream/metadata ===================================== --- /dev/null +++ b/debian/upstream/metadata @@ -0,0 +1,12 @@ +Reference: + Author: Lauris Kaplinski and Maarja Lepamets and Maido Remm + Title: "GenomeTester4: a toolkit for performing basic set operations - union, intersection and complement on k-mer lists" + Journal: GigaScience + Year: 2015 + Volume: 4 + Number: 1 + Pages: 58 + DOI: 10.1186/s13742-015-0097-y + PMID: 26640690 + URL: https://academic.oup.com/gigascience/article/4/1/1/2707786 + eprint: https://academic.oup.com/gigascience/article-pdf/4/1/1/10894573/13742_2015_Article_97.pdf ===================================== debian/watch ===================================== --- /dev/null +++ b/debian/watch @@ -0,0 +1,4 @@ +version=4 + +opts="uversionmangle=s/_/./g" \ + https://github.com/bioinfo-ut/GenomeTester4/releases .*/archive/Version_(\d[_.\d]+)@ARCHIVE_EXT@ View it on GitLab: https://salsa.debian.org/med-team/genometester/commit/c48da61fcf5ead4c3c8fc6d42a2a1b3fa8e4b2a9 -- View it on GitLab: https://salsa.debian.org/med-team/genometester/commit/c48da61fcf5ead4c3c8fc6d42a2a1b3fa8e4b2a9 You're receiving this email because of your account on salsa.debian.org.
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