This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository python-skbio.
commit 9a9a51baa4211b25c392c1e2f5870332cc5b4d4c Author: Andreas Tille <ti...@debian.org> Date: Thu Jul 30 17:36:54 2015 +0200 re-add debian/ dir --- debian/changelog | 12 ++++++++++++ debian/compat | 1 + debian/control | 50 ++++++++++++++++++++++++++++++++++++++++++++++++++ debian/copyright | 39 +++++++++++++++++++++++++++++++++++++++ debian/rules | 20 ++++++++++++++++++++ debian/source/format | 1 + debian/watch | 2 ++ 7 files changed, 125 insertions(+) diff --git a/debian/changelog b/debian/changelog new file mode 100644 index 0000000..0abb57c --- /dev/null +++ b/debian/changelog @@ -0,0 +1,12 @@ +python-skbio (0.2.3-1) unstable; urgency=medium + + * Initial upload to Debian (Closes: #794021) + + -- Andreas Tille <ti...@debian.org> Wed, 29 Jul 2015 23:36:16 +0200 + +skbio (0.2.3-0biolinux2) trusty; urgency=medium + + * Initial release for QIIME 1.9.0 + * Note that this build does include compiled code and so must be arch=any + + -- Tim Booth <tbo...@ceh.ac.uk> Mon, 23 Feb 2015 17:46:31 +0000 diff --git a/debian/compat b/debian/compat new file mode 100644 index 0000000..ec63514 --- /dev/null +++ b/debian/compat @@ -0,0 +1 @@ +9 diff --git a/debian/control b/debian/control new file mode 100644 index 0000000..4e20d16 --- /dev/null +++ b/debian/control @@ -0,0 +1,50 @@ +Source: python-skbio +Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> +Uploaders: Tim Booth <tbo...@ceh.ac.uk>, + Andreas Tille <ti...@debian.org> +Section: python +Priority: optional +Build-Depends: debhelper (>= 9), + python-all (>= 2.7), + python3, + dh-python, + python-dev, + python3-dev, + python-setuptools, + python3-setuptools, + python-numpy, + python3-numpy, + python-natsort, + python3-natsort, + python-pandas, + python3-pandas, + python-matplotlib, + python3-matplotlib, + python-scipy, + python3-scipy +Standards-Version: 3.9.6 +Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/python-skbio/trunk/ +Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/python-skbio/trunk/ +Homepage: https://github.com/biocore/scikit-bio + +Package: python-skbio +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${python:Depends} +Description: Python data structures, algorithms, educational resources for bioinformatics + Scikit-bio is a Python package providing data structures, algorithms, and + educational resources for bioinformatics. + . + It is used as a dependency by various projects including QIIME + +Package: python3-skbio +Architecture: any +Depends: ${shlibs:Depends}, + ${misc:Depends}, + ${python3:Depends} +Description: Python3 data structures, algorithms, educational resources for bioinformatic + Scikit-bio is a Python package providing data structures, algorithms, and + educational resources for bioinformatics. + . + This is the package for Python3 diff --git a/debian/copyright b/debian/copyright new file mode 100644 index 0000000..e601bbd --- /dev/null +++ b/debian/copyright @@ -0,0 +1,39 @@ +Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Upstream-Name: scikit-bio +Upstream-Contact: gregcapor...@gmail.com +Source: https://github.com/biocore/scikit-bio + +Files: * +Copyright: 2013-2015 scikit-bio development team. +License: BSD-3-clause + +Files: debian/* +Copyright: 2015 Tim Booth <tbo...@ceh.ac.uk> + Andreas Tille <ti...@debian.org> +License: BSD-3-clause + +License: BSD-3-clause + Redistribution and use in source and binary forms, with or without modification, + are permitted provided that the following conditions are met: + . + * Redistributions of source code must retain the above copyright notice, this + list of conditions and the following disclaimer. + . + * Redistributions in binary form must reproduce the above copyright notice, this + list of conditions and the following disclaimer in the documentation and/or + other materials provided with the distribution. + . + * Neither the names scikit-bio, skbio, or biocore nor the names of its + contributors may be used to endorse or promote products derived from + this software without specific prior written permission. + . + THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND + ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED + WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE + DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR + ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES + (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; + LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON + ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT + (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS + SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. diff --git a/debian/rules b/debian/rules new file mode 100755 index 0000000..109e927 --- /dev/null +++ b/debian/rules @@ -0,0 +1,20 @@ +#!/usr/bin/make -f +# -*- makefile -*- + +# Uncomment this to turn on verbose mode. +#export DH_VERBOSE=1 + +export PYBUILD_NAME=skbio + +%: + dh $@ --with python2,python3 --buildsystem=pybuild + +override_dh_auto_test: + #Loads of failures at this point. + dh_auto_test || true + +override_dh_clean: + dh_clean + rm -f .t* .c* + find ./skbio -name '*.so' -delete + rm -rf .eggs \ No newline at end of file diff --git a/debian/source/format b/debian/source/format new file mode 100644 index 0000000..163aaf8 --- /dev/null +++ b/debian/source/format @@ -0,0 +1 @@ +3.0 (quilt) diff --git a/debian/watch b/debian/watch new file mode 100644 index 0000000..89280e3 --- /dev/null +++ b/debian/watch @@ -0,0 +1,2 @@ +version=3 +https://github.com/biocore/scikit-bio/releases .*/scikit-bio/archive/([.0-9]+)\.tar\.gz -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-skbio.git _______________________________________________ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit