Andreas Tille pushed to branch master at Debian Med / ltrsift
Commits: c40ef275 by Andreas Tille at 2018-07-11T20:48:12+02:00 debhelper 11 - - - - - 173f27fa by Andreas Tille at 2018-07-11T20:48:15+02:00 Point Vcs fields to salsa.debian.org - - - - - 02759378 by Andreas Tille at 2018-07-11T20:55:11+02:00 Drop explicit debug package - - - - - 251460f8 by Andreas Tille at 2018-07-11T20:58:03+02:00 Fix spelling - - - - - 72b6e267 by Andreas Tille at 2018-07-11T20:59:34+02:00 Upload to unstable - - - - - 6 changed files: - debian/changelog - debian/compat - debian/control - debian/patches/series - + debian/patches/spelling.patch - debian/rules Changes: ===================================== debian/changelog ===================================== --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,14 @@ +ltrsift (1.0.2-8) unstable; urgency=medium + + * Team upload. + * debhelper 11 + * Point Vcs fields to salsa.debian.org + * Standards-Version: 4.1.5 + * Drop explicit debug package + * Fix spelling + + -- Andreas Tille <ti...@debian.org> Wed, 11 Jul 2018 20:58:11 +0200 + ltrsift (1.0.2-7) unstable; urgency=medium * Remove -m32/-m64 for building for i386 reproducibility. ===================================== debian/compat ===================================== --- a/debian/compat +++ b/debian/compat @@ -1 +1 @@ -9 +11 ===================================== debian/control ===================================== --- a/debian/control +++ b/debian/control @@ -3,13 +3,13 @@ Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian. Uploaders: Sascha Steinbiss <sas...@steinbiss.name> Section: science Priority: optional -Build-Depends: debhelper (>= 9), +Build-Depends: debhelper (>= 11~), libgenometools0-dev, libgtk2.0-dev, libglib2.0-dev -Standards-Version: 3.9.7 -Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/ltrsift.git -Vcs-Git: https://anonscm.debian.org/git/debian-med/ltrsift.git +Standards-Version: 4.1.5 +Vcs-Browser: https://salsa.debian.org/med-team/ltrsift +Vcs-Git: https://salsa.debian.org/med-team/ltrsift.git Homepage: http://www.zbh.uni-hamburg.de/LTRsift Package: ltrsift @@ -29,26 +29,3 @@ Description: postprocessing and classification of LTR retrotransposons structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality. - -Package: ltrsift-dbg -Architecture: any -Section: debug -Priority: extra -Depends: ${shlibs:Depends}, - ${misc:Depends}, - ltrsift (= ${binary:Version}) -Description: postprocessing and classification of LTR retrotransposons, with debug symbols - This package contains debug information stripped from LTRsift. - You may decide to install it to help identifying issues, typically - to help communication with upstream developers. - -Package: ltrsift-examples -Architecture: all -Depends: ${misc:Depends} -Suggests: ltrsift -Description: example data for LTRsift - This package contains test sequences (gzipped FASTA) and annotations (GFF3) - from the Drosophila melanogaster (fruit fly) genome, to be used in an example - process of postprocessing and classification of newly detected LTR - retrotransposons. Scripts for using LTRsift to encode the sequences into a - format accepted by LTRsift are included as well. ===================================== debian/patches/series ===================================== --- a/debian/patches/series +++ b/debian/patches/series @@ -1,2 +1,3 @@ build_on_64bit use_deterministic_file_order +spelling.patch ===================================== debian/patches/spelling.patch ===================================== --- /dev/null +++ b/debian/patches/spelling.patch @@ -0,0 +1,26 @@ +Description: Fix spelling +Author: Andreas Tille <ti...@debian.org> +Last-Update: Wed, 11 Jul 2018 20:48:12 +0200 + +--- a/src/menubar.c ++++ b/src/menubar.c +@@ -1218,7 +1218,7 @@ static void help_about_activate(GT_UNUSE + else if (err->domain == G_FILE_ERROR) + g_warning("GFileError: %s\n", err->message); + else +- g_warning("An error in the domain: %d has occured!\n", err->domain); ++ g_warning("An error in the domain: %d has occurred!\n", err->domain); + + g_error_free(err); + } +--- a/src/message_strings.h ++++ b/src/message_strings.h +@@ -147,7 +147,7 @@ + "version = \"Script version here\"\n" \ + "email = \"Your email here\"\n" \ + "short_descr = \"Short description here\"\n" \ +- "description = \"Script desription here\"\n\n" \ ++ "description = \"Script description here\"\n\n" \ + "function filter(gn)\n"\ + " return true -- return false\n" \ + "end" ===================================== debian/rules ===================================== --- a/debian/rules +++ b/debian/rules @@ -22,13 +22,13 @@ else endif %: - dh $@ --parallel + dh $@ override_dh_auto_clean: $(MAKE) cleanup override_dh_auto_build: - dh_auto_build --parallel -- x32=$(X32) 64bit=$(64BIT) errorcheck=no + dh_auto_build -- x32=$(X32) 64bit=$(64BIT) errorcheck=no override_dh_auto_test: #dh_auto_test -- useshared=yes x32=$(X32) 64bit=$(64BIT) testthreads=5 @@ -38,8 +38,5 @@ override_dh_auto_install: gzip -n -9 sample_data/dmel-2L-chromosome-r5.8.fasta dh_auto_install -- 64bit=$(64BIT) errorcheck=no prefix=$(DESTDIR)/usr -override_dh_strip: - dh_strip --dbg-package=ltrsift-dbg - override_dh_installdocs: dh_installdocs --exclude=license.template View it on GitLab: https://salsa.debian.org/med-team/ltrsift/compare/c05d8fdacd3b11d00169df726f84ac0c25954848...72b6e267b12a6729c865e64cbffaa4b60f670e49 -- View it on GitLab: https://salsa.debian.org/med-team/ltrsift/compare/c05d8fdacd3b11d00169df726f84ac0c25954848...72b6e267b12a6729c865e64cbffaa4b60f670e49 You're receiving this email because of your account on salsa.debian.org.
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