Re: Help to get Qt GUI of clonalorigin needed

2017-12-04 Thread Andreas Tille
Hi Sune, thanks for your input for this problem. On Sun, Dec 03, 2017 at 06:12:48PM +, Sune Vuorela wrote: > On 2017-12-03, Andreas Tille wrote: > > code from Qt4 to Qt5[2] which enabled to **build** the package. > > The patch looks right for a start. > > > $

December: tophat

2017-12-04 Thread Fabian Klötzl
Hi all, I just pushed some changes to build tophat with our version of libbam. Not sure if the previously mentioned issue in [1] is fixed; can't test, because my cowbuild just broke. :( Best, Fabian [1]: https://lists.debian.org/debian-med/2014/10/msg4.html

Re: December: tophat

2017-12-04 Thread Andreas Tille
Hi Fabian, thanks for working on this. On Mon, Dec 04, 2017 at 02:09:48PM +0100, Fabian Klötzl wrote: > I just pushed some changes to build tophat with our version of libbam. > Not sure if the previously mentioned issue in [1] is fixed; can't test, Thanks to the test suite we now know that the

Re: [Debian-med-packaging] Bug#780816: December: tophat

2017-12-04 Thread Fabian Klötzl
On 04.12.2017 17:33, Andreas Tille wrote: > Thanks to the test suite we now know that the issue is not solved yet: > > $ sh run-unit-test > > [2017-12-04 17:28:54] Beginning TopHat run (v2.1.1) > --- > [2017-12-04 17:28:54] Checking for Bowtie >