Hi Ben,
On Tue, Mar 24, 2020 at 10:51:07PM +0100, Ben Tris wrote:
> I have put up a list with recent updated Debian Med packages.
Could you please explain on what basis you assembled this list.
To give only two examples that make me wondering about this:
kleborate - tool to screen Klebsiella
On Tue, Mar 24, 2020 at 11:20:45PM +0100, Steffen Möller wrote:
> I must admit not to have heard about the free software directory. Debian
> Med already references bio.toos, OMICTools, SciCrunch and conda in the
> file debian/upstream/metadata. If we can somehow magically get entries
> also for the
On Mon, Mar 23, 2020 at 8:22 PM Jun Aruga wrote:
> > > > I will be attending again, yes! I haven't decided on a particular
> proposal yet. Do you have any particular ideas?
> >
> > I'm currently waiting for getting the money back for my flight to
> > FOSSASIA in Singapore. I intended to go there
[@Charles, please read below]
Hi Steffen,
On Tue, Mar 24, 2020 at 11:07:38PM +0100, Steffen Möller wrote:
> Wrt package lists I know you need this for the blends structure.
Well, not for the structure. We need to mention packaging tasks
and links to useful software could be put on our todo list.
Hi Tris,
On Wed, Mar 25, 2020 at 12:02:17PM +0100, Ben Tris wrote:
> Thanks, Andreas,
>
> This is the title now: COronaVIrus Disease 2019 (COVID-19) Special: Free
> Software Directory
>
> https://qa.debian.org/developer.php?email=debian-med-packaging%40lists.alioth.debian.org
I'd like to repeat
Thanks, Andreas,
This is the title now: COronaVIrus Disease 2019 (COVID-19) Special: Free
Software Directory
https://qa.debian.org/developer.php?email=debian-med-packaging%40lists.alioth.debian.org
That is my base, only non-free I will not use.
The packages now listed seem to be updated from so
Hello Andreas,
I contribute(d) to the FSD FSF GNU etc. Some bugs outside.
This way I direct from FSD to Debian Med, (and maybe other) consider it
a FSD special.
It also acts as a tasklist for people (like myself) to add and update
entries.
That is where my focus will be.
On 25-03-20 12:31, A
Hi Ben,
On Wed, Mar 25, 2020 at 02:05:34PM +0100, Ben Tris wrote:
>
> This way I direct from FSD to Debian Med, (and maybe other) consider it
> a FSD special.
>
> It also acts as a tasklist for people (like myself) to add and update
> entries.
>
> That is where my focus will be.
I fully accept
On 25.03.20 10:51, Andreas Tille wrote:
On Tue, Mar 24, 2020 at 11:20:45PM +0100, Steffen Möller wrote:
I must admit not to have heard about the free software directory. Debian
Med already references bio.toos, OMICTools, SciCrunch and conda in the
file debian/upstream/metadata. If we can someh
On Wed, Mar 25, 2020 at 03:33:56PM +0100, Steffen Möller wrote:
>
> > I'm not against just another registry. However, I fail to see the
> > COVID-19 relevance for maintaining registries of packages (specifically
> > since I doubt that fsd has any helpful onthology behind it) and would
> > love to
On 25.03.20 11:36, Andreas Tille wrote:
[@Charles, please read below]
Hi Steffen,
On Tue, Mar 24, 2020 at 11:07:38PM +0100, Steffen Möller wrote:
Wrt package lists I know you need this for the blends structure.
Well, not for the structure. We need to mention packaging tasks
and links to use
FYI
-- Forwarded message -
From: Hans Ienasescu
Date: Wed, Mar 25, 2020 at 5:50 PM
Subject: [bio-tools/biotoolsRegistry] bio.tools COVID-19 tools list (#505)
This issue is a placeholder for a discussion related to the bio.tools
COVID-19 related tools list.
There is a *COVID-19*
Hi,
Someone just suggested this one[1] on the JavaScript team mailing list.
Looks interesting, can we add this in for the Hackathon? :)
This might require version bumps, but there's probably no harm in adding it
for now?
[1]: https://github.com/ahmadawais/corona-cli
Regards, Nilesh
Virologists are rarely very creative when in a hurry. They want to know
something and have read in another paper how this worked for another
group. So they want that, too. And they want that quickly.
I propose that we take some of these papers and demonstrate that we can
repeat the presented anal
Hi Steffen,
On Wed, Mar 25, 2020 at 11:05:59PM +0100, Steffen Möller wrote:
> ...
All fine, but I can not comment here.
> e) show how to play with b-e, say with biopython or BALL - we just
> kicked the AutoDockToolkit out, which is unfortunate, Rosetta is very
> non-free, Pymol maybe.
Regarding
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