Re: Bug#1022571: transition: pandas 1.3 -> 1.5

2023-01-25 Thread Andreas Tille
Hi Graham,

Am Wed, Jan 25, 2023 at 02:28:37PM +0200 schrieb Graham Inggs:
> On Wed, 25 Jan 2023 at 11:43, Andreas Tille  wrote:
> > I was motivated for this patch by Diane's statement on the Debian Med
> > matrix channel that dask and dask.distributed are interconnected.  If
> > the autopkgtest on Salsa CI[4] would have passed I would have uploaded.
> 
> We will temporarily remove dask.distributed from testing, which should
> unblock dask and pandas.

Thanks a lot!

> No uploads please, until dask and pandas have migrated.

Yep

   Andreas. 

-- 
http://fam-tille.de



Re: Bug#1022571: transition: pandas 1.3 -> 1.5

2023-01-25 Thread Graham Inggs
Hi Rebecca, Andreas

On Wed, 25 Jan 2023 at 11:43, Andreas Tille  wrote:
> I was motivated for this patch by Diane's statement on the Debian Med
> matrix channel that dask and dask.distributed are interconnected.  If
> the autopkgtest on Salsa CI[4] would have passed I would have uploaded.

We will temporarily remove dask.distributed from testing, which should
unblock dask and pandas.
No uploads please, until dask and pandas have migrated.

Regards
Graham



Re: Bug#1022571: transition: pandas 1.3 -> 1.5

2023-01-25 Thread Andreas Tille
Hi Graham

Am Tue, Jan 24, 2023 at 12:50:41PM +0200 schrieb Graham Inggs:
> 
> On Tue, 24 Jan 2023 at 00:16, Rebecca N. Palmer  
> wrote:
> > The remaining autopkgtest failures blocking pandas are:
> > - dipy/amd64 and snakemake/i386 look like random flakiness: please retry
> > them.  (I think DMs can't use the self-service interface.)  Or for dipy,
> > see #1029533 for a possible fix.
> 
> These have cleared up.
> 
> > - python-xarray/i386 looks like xarray not pandas: see #1004869.
> 
> Sometimes britney is too greedy and pins too many packages from
> unstable.  I managed to find the right combination [1] and got the
> test to pass without python-xarray.

Thanks a lot.
 
> > - dask and dask.distributed have to go together, with or before pandas.
> 
> There's nothing in the currently uploaded packages that specifies
> this, although I do see a commit on salsa [2].

I was motivated for this patch by Diane's statement on the Debian Med
matrix channel that dask and dask.distributed are interconnected.  If
the autopkgtest on Salsa CI[4] would have passed I would have uploaded.

Unfortunately I have no idea how to deal with those
PytestUnraisableExceptionWarnings raised in this test and thus I did
not upload.

> I tried running dask.distributed's autopkgtest with dask and itself
> from unstable [3], but no luck.

Diane, could you please comment on this or at least throw some ENOTIME
error to let others know.

Thanks a lot for you contribution in any case
   Andreas. 
 
> [1] https://ci.debian.net/packages/p/python-xarray/testing/i386/
> [2] 
> https://salsa.debian.org/python-team/packages/dask.distributed/-/commit/9df3fe1a0ea7538f742ebb162379e3cd50b388e6
> [3] https://ci.debian.net/packages/d/dask.distributed/testing/amd64/

[4] 
https://salsa.debian.org/python-team/packages/dask.distributed/-/jobs/3834919 

-- 
http://fam-tille.de



Re: Bug#1022571: transition: pandas 1.3 -> 1.5

2023-01-24 Thread Graham Inggs
Hi Rebecca

On Tue, 24 Jan 2023 at 00:16, Rebecca N. Palmer  wrote:
> The remaining autopkgtest failures blocking pandas are:
> - dipy/amd64 and snakemake/i386 look like random flakiness: please retry
> them.  (I think DMs can't use the self-service interface.)  Or for dipy,
> see #1029533 for a possible fix.

These have cleared up.

> - python-xarray/i386 looks like xarray not pandas: see #1004869.

Sometimes britney is too greedy and pins too many packages from
unstable.  I managed to find the right combination [1] and got the
test to pass without python-xarray.

> - dask and dask.distributed have to go together, with or before pandas.

There's nothing in the currently uploaded packages that specifies
this, although I do see a commit on salsa [2].
I tried running dask.distributed's autopkgtest with dask and itself
from unstable [3], but no luck.

Regards
Graham


[1] https://ci.debian.net/packages/p/python-xarray/testing/i386/
[2] 
https://salsa.debian.org/python-team/packages/dask.distributed/-/commit/9df3fe1a0ea7538f742ebb162379e3cd50b388e6
[3] https://ci.debian.net/packages/d/dask.distributed/testing/amd64/



Re: Bug#1022571: transition: pandas 1.3 -> 1.5

2023-01-23 Thread Rebecca N. Palmer

The remaining autopkgtest failures blocking pandas are:
- dipy/amd64 and snakemake/i386 look like random flakiness: please retry 
them.  (I think DMs can't use the self-service interface.)  Or for dipy, 
see #1029533 for a possible fix.

- python-xarray/i386 looks like xarray not pandas: see #1004869.
- dask and dask.distributed have to go together, with or before pandas.



Re: Bug#1022571: transition: pandas 1.3 -> 1.5

2023-01-09 Thread Rebecca N. Palmer

skbio is fixed, ulmo is maybe fixed but untested.

dask is unclear (see #1027254 for details): it looks like it's probably 
fixable, but I don't have an actual working fix yet.  There has been no 
response from its maintainers.