Fwd: Accepted ufsparse 1.2-1 (source all i386)

2006-04-24 Thread Christophe Prud'homme
libufsparse-dbg libufsparse-dev Architecture: source all i386 Version: 1.2-1 Distribution: unstable Urgency: low Maintainer: Debian Scientific Computing Team [EMAIL PROTECTED] Changed-By: Christophe Prud'homme [EMAIL PROTECTED] Description: libufsparse - collection of libraries for computations

Re: Simulation software package maintainer is xmds, version 1.5-3

2006-11-23 Thread Christophe Prud'homme
Rafael, Paul, All, | | A new Alioth project just for xmds is probably an overkill. We might add | it to the existent pkg-scicomp group. I am Cc:ing this message to | Christophe Prud'homme, the admin of the group. I think he will not object | to it. I won't object at all. this is the purpose

Re: Simulation software package maintainer is xmds, version 1.5-3

2006-11-23 Thread Christophe Prud'homme
[ Thursday 23 November 2006 18:31 ] | * Christophe Prud'homme [EMAIL PROTECTED] [2006-11-23 17:54]: | Rafael, Paul, All, | | | A new Alioth project just for xmds is probably an overkill. We might | | add it to the existent pkg-scicomp group. I am Cc:ing this message to | | Christophe

Re: Scienfific (was Re: Simulation software package maintainer is xmds, version 1.5-3)

2006-11-24 Thread Christophe Prud'homme
[ jeudi 23 novembre 2006 21:11 Vanuxem Gregory ] | Debian Developer - http://people.debian.org/~prudhomm/ | Scienfific computing packages maintainer | | | | Is it an error ? If not what is its definition ? Of course it is scientific thanks for noticing it is corrected now. | | Not

Re: Science group on alioth

2008-01-24 Thread Christophe Prud'homme
[ Thursday 24 January 2008 ] | Hello, | | After a few discussions with Raphael and Adam, I would like to propose | to create a pkg-science on alioth in order to create a dynamic around | scientific software packaging. | Adam created a package of Opencascade. To simplify the maintenance of | this

Re: Science group on alioth

2008-01-24 Thread Christophe Prud'homme
[ Thursday 24 January 2008 ] | Le jeudi 24 janvier 2008 à 20:31 +0100, Christophe Prud'homme a écrit : | [ Thursday 24 January 2008 ] | | | Hello, | | | | After a few discussions with Raphael and Adam, I would like to propose | | to create a pkg-science on alioth in order to create a dynamic

Re: Science group on alioth

2008-01-26 Thread Christophe Prud'homme
David, Before we kill pkg-science, are people ok with pkg-scicomp including e.g. graph theory? I.e. stuff outside the normal numerical idea that some people have about scientific computing? I certainly don't mind, but when I hear scientific computing, I think of numerics. I guess you are

Re: Science group on alioth

2008-01-26 Thread Christophe Prud'homme
with occ for example) . Best regards C. On Jan 26, 2008 10:18 PM, David Bremner [EMAIL PROTECTED] wrote: Christophe == Christophe Prud'homme [EMAIL PROTECTED] writes: Christophe David, Before we kill pkg-science, are people ok with pkg-scicomp including e.g. graph theory? I.e

Re: OpenFOAM

2008-03-18 Thread Christophe Prud'homme
[ Sunday 16 March 2008 ] | On 15/03/2008, Jordi Gutiérrez Hermoso [EMAIL PROTECTED] wrote: | I'm still having problems installing OpenFOAM. I get | | blockMesh: /usr/lib/libstdc++.so.6: version `GLIBCXX_3.4.9' not | found (required by blockMesh) | | which looks like the binary was

Re: Science linguistics and debian-science SVN repository at alioth

2008-05-06 Thread Christophe Prud'homme
Hi I agree. Is it not the same idea as the pkg-science team started by Sylvestre Ledru (package there what is not more suitable somewhere else like in DebiChem, pkg-scicomp, Debian Med, etc.)? I would suggest pkg-scicomp which seems more suite for the task. Best regards C. -- To

Re: Repository?

2008-05-08 Thread Christophe Prud'homme
[ Tuesday 06 May 2008 ] | With respect to the packaging policy | http://lists.debian.org/debian-science/2008/05/msg00029.html (for | pkg-science or whatever it turns into), for the sake of simplicity, I | would suggest to adopt and adapt the Debian Med existing policy: |

Re: Repository?

2008-05-08 Thread Christophe Prud'homme
Hello | David Bremner [EMAIL PROTECTED] (2008-05-06 11:23:34) : | Speaking as the maintainer of all packages in pkg-science ( all 3 :-) | ), I don't mind any sort of merging plan. But I understood from | previous mails from C. Prudhomme that he (and others?) preferred to | keep pkg-scicomp a

Re: {debian,pkg}-science repository [Was: Science linguistics and debian-science SVN repository at alioth]

2008-05-08 Thread Christophe Prud'homme
[ Thursday 08 May 2008 ] | So well, David, no answers from pkg-scicomp so far. see my answer to Frederic. | I do not really | know what this means, it means I am busy. Being a professor at a university is certainly a busy job ;). Moreover it is holiday here in France. | but I think we

Re: Something similar as FEMM

2008-06-08 Thread Christophe Prud'homme
freefem++ is packaged in pkg-scicomp but needs some license work before upload svn+ssh://svn.debian.org/svn/pkg-scicomp/freefem++/trunk Best regards C. On Sun, Jun 8, 2008 at 5:26 AM, Jordi Gutiérrez Hermoso [EMAIL PROTECTED] wrote: On 07/06/2008, Renato S. Yamane [EMAIL PROTECTED] wrote: I

Open research engineer position in scientific computing

2008-06-23 Thread Christophe Prud'homme
All, In Laboratoire Jean Kuntzmann (LJK) [1] in Grenoble [2], we have an opened research engineer position in scientific computing [3]. Below you will find the translation of the job description. The application deposit is open until July 9 2008 at 17h (French Time). You have some questions

Re: Package categories

2008-07-24 Thread Christophe Prud'homme
=== Finite Element Analysis === proposed -- field::physics:fea (it isn't clear to me that this should be in physics rather than engineering, so maybe field::fea would be better) agreed or field::engineering::fea if field::engineering exists note that it could also fit in math / numerical

Re: [Pkg-scicomp-devel] Package categories

2008-07-31 Thread Christophe Prud'homme
At the same time, I am wondering why abinit got uploaded to pkg-scicomp without consulting the debichem team first? simple and honest answer: we didn't know about debichem. the person who brought abinit to pkg-scicomp, Ondrej Certik, does a superb job and he is certainly very helpful in

Re: Proposal: Bits from Debian-science

2008-08-04 Thread Christophe Prud'homme
Frederic, I would volunteer to add information regarding pkg-scicomp. On Fri, Aug 1, 2008 at 8:16 AM, Frederic Lehobey [EMAIL PROTECTED] wrote: Hi, Chris Walker [EMAIL PROTECTED] (2008-08-01 00:39:03) : What I think would be useful is Bits from... mails from debian-science etc. If nothing

Re: [Pkg-scicomp-devel] Proposal: Bits from Debian-science

2008-08-04 Thread Christophe Prud'homme
Chris, this is a good idea. Digesting and presenting what is going on in Debian Science (I include pkg-scicomp) would be indeed very good. Indeed. What I think would be useful is Bits from... mails from debian-science etc. If nothing else, it would increase the profile of science in Debian.

ITP: life -- LIbrary for the Finite Element method

2008-08-12 Thread Christophe Prud'homme
Package: wnpp Severity: wishlist X-Debbugs-CC: [EMAIL PROTECTED] --- Please fill out the fields below. --- Package name: life Version: 0.9.8 Upstream Author: Christophe Prud'homme [EMAIL PROTECTED] URL: http://www.prudhomm.org/life License: LGPL Description

Re: Bug#457075: Status of Salomé packaging

2008-08-21 Thread Christophe Prud'homme
To follow Ondrej comment, I have been in contact with some people close to the Salome project. With almost the same ones we are going to have a similar project to build a recently funded open platform (OPUS) for uncertainty quantification in simulations possibly based on openturns (in the NEW

Fwd: Accepted openturns 0.12.1-4 (source all i386)

2008-10-01 Thread Christophe Prud'homme
openturns is) 2. http://buildd.debian.org/~jeroen/status/package.php?p=openturns -- Forwarded message -- From: Christophe Prud'homme [EMAIL PROTECTED] Date: Wed, Oct 1, 2008 at 12:02 PM Subject: Accepted openturns 0.12.1-4 (source all i386) To: [EMAIL PROTECTED] -BEGIN PGP

Presentation of Debian Science/Octave/Scilab/Scicomp, roundtable on free software

2008-10-02 Thread Christophe Prud'homme
Annecy - Grenoble Scientific computing related software -- Christophe Prud'homme Université Joseph Fourier [EMAIL PROTECTED] LJK - Room 55 Tel: +33476635497 51, rue des Mathématiques Fax: +33476631263 BP53X 38041 Grenoble Cedex 9 http://ljk.imag.fr/membres

Re: Presentation of Debian Science/Octave/Scilab/Scicomp, roundtable on free software

2008-10-02 Thread Christophe Prud'homme
Sylvestre thanks for your support. By the way you will have both the scilab hat and Debian hat. I will have the Mediator/OPUS hat and the Debian one. Debian is officially declared as a project that should participate to the discussion. My initial email purpose is to gather some facts and people

Bug#539861: ITP: madlib -- mesh adaptation library

2009-08-04 Thread Christophe Prud'homme
Package: wnpp Severity: wishlist X-Debbugs-CC: debian-de...@lists.debian.org,pkg-scicomp-de...@lists.alioth.debian.org,debian-science@lists.debian.org --- Please fill out the fields below. --- Package name: madlib Version: 1.2.2 Upstream Author: Jean-François Remacle

Re: Paraview status

2009-10-10 Thread Christophe Prud'homme
, 2009 at 01:47:03PM +0200, Francesco P. Lovergine wrote: It is already so, isn't it? No. Maintainer: Debian Scientific Computing Team pkg-scicomp-de...@lists.alioth.debian.org Uploaders: Christophe Prud'homme prudh...@debian.org, Ondrej Certik ond...@certik.cz We have a historical

Re: [Pkg-scicomp-devel] RFS: ufl

2009-10-27 Thread Christophe Prud'homme
Johannes sorry for having forgotten you . The ufl, dolfin are packaged on my machine and will be uploaded today Best regards C. On Tue, Oct 27, 2009 at 3:15 PM, Johannes Ring joha...@simula.no wrote: Dear mentors, debian-science, pkg-scicomp, I am looking for a sponsor for my package ufl.

Re: Extensible Simulation Package for Research on Soft matter

2010-01-20 Thread Christophe Prud'homme
FYI I just uploaded life in Debian a library for finite element methods that allows to build finite element applications(hence simulations) and I agree with the fact that simulation is very/too generic C. 2009/1/22 Jörg-Volker Peetz jvpe...@web.de: I support this point of view. Simulation,

petsc3.1 using lam instead of openmpi ? incompatilbity with boost::mpi...

2010-05-27 Thread Christophe Prud'homme
Adam, I certainly missed some emails but the recent petsc3.1 upload compiled with lam (and not the default openmi) provoked a massive breakage on my side: slepc and life (which uses also slepc). I managed to recompile life without slepc but I also use boost mpi compiled (build-depending on)

Re: [Pkg-scicomp-devel] petsc3.1 using lam instead of openmpi ? incompatilbity with boost::mpi...

2010-05-27 Thread Christophe Prud'homme
Thanks Adam for your very quick answer ! I was quite worried in fact and now I am relieved :) I'll upload a new slepc and life tomorrow I am still angry at the PETSc guys, they made again very slight changes to their interface and it breaks slepc and life. It is not big deal (at least from what

Re: RFS: vmtk

2010-06-04 Thread Christophe Prud'homme
Hi Johannes I am compiling it now. I let you know when it is done if all goes right I upload ! could I upload the package in Debian science too (svn-buildpackage) ? Best regards C. On Fri, Jun 4, 2010 at 10:23 AM, Johannes Ring joha...@simula.no wrote: Dear mentors, debian-science, I am

Re: RFS: vmtk

2010-06-04 Thread Christophe Prud'homme
Johannes I just uploaded vmtk. I removed vtm from DebianScience and svn-injected it (with mergeWithUpstream) Best regards C. On Fri, Jun 4, 2010 at 12:24 PM, Johannes Ring joha...@simula.no wrote: Hi Christophe, On Fri, Jun 4, 2010 at 12:09 PM, Christophe Prud'homme prudh...@debian.org

Re: RFS: vmtk

2010-06-04 Thread Christophe Prud'homme
Hi Johannes I see that you didn't add the DM-Upload-Allowed flag in debian/control. It would be great if I could upload after it is accepted the first time. What do you think? Fine by me! you are the one maintaining. Don't hesitate to remind me about that. Best regards C.

MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-06 Thread Christophe Prud'homme
All, for the last few weeks, I have life [1] failing to compile on sparc (see below). Boost::MPI looks for OpenMPI but I was told that that the MPI implementation on sparc is LAM (is that right?) Life and Boost::Mpi use mpi-default-dev in Build-Depends . It seems like there is something fishy

Re: MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-06 Thread Christophe Prud'homme
1. http://packages.qa.debian.org/l/life.html http://packages.qa.debian.org/l/life.html 2. https://buildd.debian.org/status/package.php?p=life#fail-life-sparc On Sun, Jun 6, 2010 at 9:36 AM, Christophe Prud'homme prudh...@debian.orgwrote: All, for the last few weeks, I have life [1] failing

Re: MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-06 Thread Christophe Prud'homme
this in the mean time Best regards C. On Sun, Jun 6, 2010 at 9:37 AM, Christophe Prud'homme prudh...@debian.orgwrote: 1. http://packages.qa.debian.org/l/life.html http://packages.qa.debian.org/l/life.html 2. https://buildd.debian.org/status/package.php?p=life#fail-life-sparc On Sun, Jun 6, 2010

Re: MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-07 Thread Christophe Prud'homme
Steve, On Mon, Jun 7, 2010 at 5:43 AM, Steve M. Robbins st...@sumost.ca wrote: The mpi-defaults control file specifies lam for sparc, check the buildd log: https://buildd.debian.org/fetch.cgi?pkg=mpi-defaultsarch=sparcver=0.6stamp=1246463638file=logas=raw As far as I can tell, Boost is

Re: MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-09 Thread Christophe Prud'homme
. Robbins wrote: On Mon, Jun 07, 2010 at 09:02:41AM +0200, Christophe Prud'homme wrote: On my side life depends solely on mpi-default-dev, it seems that some other package don't (e.g. hdf5), isn't it a problem ? Yes, something like that is likely the problem. Note that libhdf5-mpi

Re: MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-09 Thread Christophe Prud'homme
30manual mode 2/usr/lib/mpich/include 10manual mode 3/usr/lib/openmpi/include 40manual mode On Wed, Jun 9, 2010 at 8:53 PM, Christophe Prud'homme prudh...@debian.orgwrote: I tried, without success so far, to help cmake(FindMPI.cmake) find

Re: MPI issue on sparc ? Boost::mpi looks for OpenMPI but it should be LAM no ?

2010-06-11 Thread Christophe Prud'homme
Hi Adam, thanks for your answer ! On Fri, Jun 11, 2010 at 8:05 PM, Adam C Powell IV hazel...@debian.orgwrote: If mpi-default-dev points to lam, then why is OpenMPI installed in the system? Just use mpi-default-dev and libhdf5-mpi-dev and they should be consistent. If they're not, then HDF5

Re: paraview moving to testing

2010-07-05 Thread Christophe Prud'homme
good job! thanks for taking this over On Sun, Jul 4, 2010 at 11:46 AM, Mathieu Malaterre mathieu.malate...@gmail.com wrote: Hi there, I believe the paraview package is now finally in good shape and should finally go back to testing in a couple of days:

plans for petsc3.1 on hppa

2010-07-05 Thread Christophe Prud'homme
Dear Adam, what are your plans regarding the build issue of petsc3.1 on hppa ? at the moment this issue blocks slepc and life from reaching testing Should I change the build-depends to petsc 3.0 on hppa ? or are you planning an upload the next few days ? Best regards C.

Re: Maintainers of scientific applications: Please maintain tasks files! (Was: Bug#592701: science-statistics: typo in package description)

2010-08-13 Thread Christophe Prud'homme
Andreas, On Fri, Aug 13, 2010 at 9:30 AM, Andreas Tille ti...@debian.org wrote: Dear Christophe, On Fri, Aug 13, 2010 at 08:52:25AM +0200, Christophe Prud'homme wrote: I worked a little bit on the tasks but I don't have the permission to write on the svn server Can't create directory

Re: [Pkg-scicomp-devel] Maintainers of scientific applications: Please maintain tasks files! (Was: Bug#592701: science-statistics: typo in package description)

2010-08-13 Thread Christophe Prud'homme
Andreas On Fri, Aug 13, 2010 at 11:16 AM, Andreas Tille ti...@debian.org wrote: Could you please try again to commit this just to verify whether it works now? Yup it is good now :) thanks! Will I receive -commits emails or is there a mailing list I should subscribe to ? Best regards C. --

trilinos debian package

2010-08-13 Thread Christophe Prud'homme
Hi Johannes, I nmoved the trilinos package from Debian pkg-scicomp to Debian Science and updated accordingly the control fields We are behind on the trilinos package, could you update the patch series for the trilinos_ library prefix please ? I think it is time that we send this patch to

Re: trilinos debian package

2010-08-13 Thread Christophe Prud'homme
On Fri, Aug 13, 2010 at 2:04 PM, Johannes Ring joha...@simula.no wrote: BTW, the latest Trilinos release is 10.4.0 while in the Debian changelog we have 10.2.0. I guess we should still go for 10.4.0, right? yes :) thanks a lot ! again I moved trilinos to Debian science svn repo -- Debian

Re: trilinos debian package

2010-08-14 Thread Christophe Prud'homme
right now but I will try to do it later this weekend (if you don't beat me to it). Johannes On Fri, Aug 13, 2010 at 2:49 PM, Christophe Prud'homme prudh...@debian.org wrote: On Fri, Aug 13, 2010 at 2:04 PM, Johannes Ring joha...@simula.no wrote: BTW, the latest Trilinos release

issues with pdflatex and font creation in scientific software ?

2011-04-24 Thread Christophe Prud'homme
Hi All, for some time now I have my package Feel++(a library and language for pde solving) that has issues on some platforms with (pdf)latex and the generation of fonts I get this message while building the documentation of the software kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag

Re: issues with pdflatex and font creation in scientific software ?

2011-04-25 Thread Christophe Prud'homme
. You might be able to work around the problem by using the chmod or chown command on the appropriate directory. I hope that helps, Kingsley On 04/24/11 23:09, Christophe Prud'homme wrote: Hi All, for some time now I have my package Feel++(a library and language for pde solving) that has

Re: issues with pdflatex and font creation in scientific software ?

2011-04-25 Thread Christophe Prud'homme
David, I tried on the porter sparc machine (smetana or zelanka) and it worked fine I guess I will fill a bug report on texlive Best regards C. On Mon, Apr 25, 2011 at 12:19 PM, David Bremner brem...@debian.org wrote: On Mon, 25 Apr 2011 11:18:48 +0200, Christophe Prud'homme prudh

Re: abinit

2012-04-04 Thread Christophe Prud'homme
Hi Ólafur, Thanks for the email. I helped with abinit some years ago when some people from CEA Grenoble approached me to put abinit in Debian. I have personnally no use of abinit and I haven't the time to look into it. I CC the debian science list to see if someone there would be able to help

Re: Is there any point in loading SVN with outdated upstream source?

2012-04-04 Thread Christophe Prud'homme
good point. It should indeed be removed must have been there for a long time before I learned about the -o option from svn-buildpackage On Wed, Apr 4, 2012 at 12:04 PM, Andreas Tille andr...@an3as.eu wrote: Hi, I stumbled upon svn+ssh://

Re: Is there any point in loading SVN with outdated upstream source?

2012-04-04 Thread Christophe Prud'homme
Andreas, I am for this cleanup. Best regards C. On Wed, Apr 4, 2012 at 1:40 PM, Andreas Tille andr...@an3as.eu wrote: thanks for the clarification. However, my question had a more general part: Is it OK to simply delete upstream code of *any* package I might stumble upon from our SVN in

Re: abinit

2012-04-04 Thread Christophe Prud'homme
, Christophe Prud'homme wrote: Hi Ólafur, Thanks for the email. I helped with abinit some years ago when some people from CEA Grenoble approached me to put abinit in Debian. I have personnally no use of abinit and I haven't the time to look into it. I CC the debian science list to see if someone

Gmsh package broken ?

2012-04-07 Thread Christophe Prud'homme
Anton, It seems like the recent upload of Gmsh is broken. The Gmsh dynamic library cannot find the symbols of the libraries Gmsh depends upon. Could you fix this please ? At the moment it breaks the Feel++ build and I would like to upload -4 so that Feel++ work on Debian as well as Ubuntu.

Re: Gmsh package broken ?

2012-04-07 Thread Christophe Prud'homme
. April 2012 10:18 schrieb Sylvestre Ledru sylves...@debian.org: Le samedi 07 avril 2012 à 08:04 +0200, Christophe Prud'homme a écrit : Anton, Could you fix this please ? At the moment it breaks the Feel++ build and I would like to upload -4 so that Feel++ work on Debian as well as Ubuntu

Re: Gmsh package broken ?

2012-04-09 Thread Christophe Prud'homme
Anton great that you found the solution. I never had to use -shared. This is a bit strange but if this work then that's all good for me. On Sun, Apr 8, 2012 at 7:58 AM, Anton Gladky gladky.an...@gmail.com wrote: Thanks all for discussion. a The problem was fixed by adding -shared to

buildd failure due to lack of disk space, how to rebuild ?

2012-04-16 Thread Christophe Prud'homme
All, buildd failed on ia64 for feel++ (-4) due to lack of disk space. Is there another way than uploading -5 ? Best regards C.

Re: Debian at ESRF

2012-04-18 Thread Christophe Prud'homme
Jerome, This is excellent news ! Grenoble is a place where Debian has a strong presence. I am a professor at the Université Joseph Fourier in applied mathematics and Debian is both used in research and teaching. I am a strong advocate of Debian there but not the only. Once you've tested its

Re: New Debian Science metapackages (Was: debian-science_0.16_amd64.changes ACCEPTED into unstable)

2012-04-18 Thread Christophe Prud'homme
I fully agree wit this proposal. Debian and Debian Science deserve being recognized in the field of scientific computing. I would be happy to help in this endeavor. As to my research all the numerical results we display are done on Debian machines. I haven't found anything else as rich and

problem with gmsh ?

2012-06-13 Thread Christophe Prud'homme
Hello gmsh crashes on my debian boxes here is the backtrace gdb gmsh GNU gdb (GDB) 7.4.1-debian Copyright (C) 2012 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later http://gnu.org/licenses/gpl.html This is free software: you are free to change and redistribute it. There

Autobuild on a specific buildd machine ?

2013-10-03 Thread Christophe Prud'homme
Hello, I have looking around the Debian pages using google for the following question: is that possible to specify a buildd machine for an architecture when uploading a package ? The problem is the following, I am uploading feel++ which requires a little bit of memory and typically 2Gb of RAM is

Re: Autobuild on a specific buildd machine ?

2013-10-05 Thread Christophe Prud'homme
+0200, Christophe Prud'homme wrote: is that possible to specify a buildd machine for an architecture when uploading a package ? No, it's not. You can however talk to the buildd admins ($arch@buildd.d.o) about blacklisting a package on some buildds. Cheers, Julien -- Julien Cristau