Processing of mpich_3.4~a2-2_source.changes

2020-03-02 Thread Debian FTP Masters
mpich_3.4~a2-2_source.changes uploaded successfully to localhost along with the files: mpich_3.4~a2-2.dsc mpich_3.4~a2-2.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list

Bug#944769: python3-h5py fails to import if offline due to apparent MPI failure

2020-03-02 Thread Drew Parsons
On 2020-03-02 18:21, Thibaut Paumard wrote: Le 01/03/2020 à 20:26, Drew Parsons a écrit : your h5py suggestion of [...] works up to a point. Hi Drew, Do I read correctly in your other mail that you have found a workaround? That's right, I've been building up my python-fu. My first take

Bug#940951: Upstream version (and ideally commit) which fixed CVE-2018-7587?

2020-03-02 Thread Salvatore Bonaccorso
Hi Andreas, On Mon, Mar 02, 2020 at 01:45:04PM +, Debian Bug Tracking System wrote: > Hello Andreas, > > I think I've fixed these bugs indeed, a few months ago. > > Regards, > > David. > > PS : I'm sorry but I don't write Changelog for CImg anymore. Not > that I don't maintain it, but it

Bug#940951: marked as done (cimg: CVE-2018-7587)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 2 Mar 2020 14:42:38 +0100 with message-id <20200302134238.gf14...@an3as.eu> and subject line [david.tschumpe...@ensicaen.fr: Re: CVE-2018-7587 and CVE-2019-13568] has caused the Debian Bug report #940951, regarding cimg: CVE-2018-7587 to be marked as done. This means that

mpich_3.4~a2-2_source.changes ACCEPTED into unstable

2020-03-02 Thread Debian FTP Masters
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 02 Mar 2020 12:34:51 + Source: mpich Architecture: source Version: 3.4~a2-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Alastair McKinstry Changes: mpich

Processed: closing 940952

2020-03-02 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org: > close 940952 2.8.4+dfsg-1 Bug #940952 {Done: Andreas Tille } [src:cimg] cimg: CVE-2019-13568 Marked as fixed in versions cimg/2.8.4+dfsg-1. Bug #940952 {Done: Andreas Tille } [src:cimg] cimg: CVE-2019-13568 Bug 940952 is already marked as done;

Bug#940952: marked as done (cimg: CVE-2019-13568)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 2 Mar 2020 14:42:38 +0100 with message-id <20200302134238.gf14...@an3as.eu> and subject line [david.tschumpe...@ensicaen.fr: Re: CVE-2018-7587 and CVE-2019-13568] has caused the Debian Bug report #940952, regarding cimg: CVE-2019-13568 to be marked as done. This means

Bug#944769: python3-h5py fails to import if offline due to apparent MPI failure

2020-03-02 Thread Thibaut Paumard
Hi Drew, I see, so you effectively copy all symbols from _h5py except those that look like __foo__ which is Python internal stuff, *and* you give them an entry under h5py in sys.modules. Nice, that should be pretty stable. Actually, you don't treat public_api differently from weak_privates, and

Bug#952971: arachne-pnr FTCBFS: upstream expects different variables

2020-03-02 Thread Helmut Grohne
Source: arachne-pnr Version: 0.1+20180909git840bdfd-1 Tags: patch User: debian-cr...@lists.debian.org Usertags: ftcbfs arachne-pnr fails to cross build from source, because the Debian packaging does not pass the variables that upstream needs. The upstream Makefile does support cross compilation,

Bug#689648: marked as done (scilab: crash on launching ATOMS Module Manager)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #689648, regarding scilab: crash on launching ATOMS Module Manager to be

cimg_2.8.4+dfsg-1_source.changes ACCEPTED into unstable

2020-03-02 Thread Debian FTP Masters
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 02 Mar 2020 11:13:46 +0100 Source: cimg Architecture: source Version: 2.8.4+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Team Changed-By: Andreas Tille Closes: 951965 Changes: cimg

Bug#883820: marked as done (scilab-cli: broken symlink: /usr/share/man/man1/scilab-cli.1.gz -> scilab.1.gz)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #883820, regarding scilab-cli: broken symlink:

Your Account will be disabled

2020-03-02 Thread Server
Your Account will be disabled Account debian-science-maintain...@lists.alioth.debian.org will be disabled. It looks like it was being used in a way that violated our policies. We understand your account is important to you. So if you think this was a mistake, sign in

Processing of cimg_2.8.4+dfsg-1_source.changes

2020-03-02 Thread Debian FTP Masters
cimg_2.8.4+dfsg-1_source.changes uploaded successfully to localhost along with the files: cimg_2.8.4+dfsg-1.dsc cimg_2.8.4+dfsg.orig.tar.xz cimg_2.8.4+dfsg-1.debian.tar.xz cimg_2.8.4+dfsg-1_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) --

Bug#886837: marked as done (scilab: impossible to plot anything)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #886837, regarding scilab: impossible to plot anything to be marked as

Bug#902021: marked as done ([buster] scilab can't be installed: dependencies break system libs)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #902021, regarding [buster] scilab can't be installed: dependencies break

Bug#615439: Closing as the problem doesn't appear anymore

2020-03-02 Thread Julien Puydt
Hi, I checked and couldn't reproduce the problem : it looks like everything is alright now. Cheers, JP -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers

Bug#940952: CVE-2018-7587 and CVE-2019-13568

2020-03-02 Thread Andreas Tille
Control: tags -1 upstream Control: forwarded -1 David Tschumperlé Hi David, there are two bug reports about CVE related bugs against the Debian package of an older version of cimg (which was not updated since some time :-( - also shame on me but I have quite a number of packages in Debian Med

Processed: CVE-2018-7587 and CVE-2019-13568

2020-03-02 Thread Debian Bug Tracking System
Processing control commands: > tags -1 upstream Bug #940951 [src:cimg] cimg: CVE-2018-7587 Added tag(s) upstream. > forwarded -1 David Tschumperlé Bug #940951 [src:cimg] cimg: CVE-2018-7587 Set Bug forwarded-to-address to 'David Tschumperlé '. -- 940951:

Processed: CVE-2018-7587 and CVE-2019-13568

2020-03-02 Thread Debian Bug Tracking System
Processing control commands: > tags -1 upstream Bug #940952 [src:cimg] cimg: CVE-2019-13568 Ignoring request to alter tags of bug #940952 to the same tags previously set > forwarded -1 David Tschumperlé Bug #940952 [src:cimg] cimg: CVE-2019-13568 Set Bug forwarded-to-address to 'David

Bug#898621: marked as done (scilab: missing dependencies on some java packages)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #898621, regarding scilab: missing dependencies on some java packages to

Bug#910063: marked as done (scilab: always crash on inv(eye(30,30)))

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #910063, regarding scilab: always crash on inv(eye(30,30)) to be marked as

Bug#896119: marked as done (scilab: ATOMS system is broken in Scilab 6 on buster)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #896119, regarding scilab: ATOMS system is broken in Scilab 6 on buster to

Bug#697626: marked as done (scilab: unlisted ATOMS dependency: perhaps libservlet2.5-java?)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #697626, regarding scilab: unlisted ATOMS dependency: perhaps

Bug#903209: marked as done (scilab: ATOMS system is broken in Scilab 6 on buster)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 13:27:21 +0100 with message-id <2ccd1f1f1a1aa2bd7fea071deb1b6da854862f5b.ca...@laposte.net> and subject line Closing as the problem doesn't appear anymore has caused the Debian Bug report #896119, regarding scilab: ATOMS system is broken in Scilab 6 on buster to

Bug#951965: marked as done (cimg: FTBFS: ../CImg.h:413:10: fatal error: cv.h: No such file or directory)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Mon, 02 Mar 2020 11:04:28 + with message-id and subject line Bug#951965: fixed in cimg 2.8.4+dfsg-1 has caused the Debian Bug report #951965, regarding cimg: FTBFS: ../CImg.h:413:10: fatal error: cv.h: No such file or directory to be marked as done. This means that you

Bug#944769: python3-h5py fails to import if offline due to apparent MPI failure

2020-03-02 Thread Drew Parsons
On 2020-03-02 23:58, Thibaut Paumard wrote: Hi Drew, I see, so you effectively copy all symbols from _h5py except those that look like __foo__ which is Python internal stuff, *and* you give them an entry under h5py in sys.modules. Nice, that should be pretty stable. Thanks for reviewing,

[bts-link] source package src:scikit-learn, src:python-skbio

2020-03-02 Thread debian-bts-link
# # bts-link upstream status pull for source package src:scikit-learn, src:python-skbio # see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html # https://bts-link-team.pages.debian.net/bts-link/ # user debian-bts-l...@lists.debian.org # remote status report for #951222

Bug#940951: Upstream version (and ideally commit) which fixed CVE-2018-7587?

2020-03-02 Thread Andreas Tille
On Mon, Mar 02, 2020 at 03:43:16PM +0100, Salvatore Bonaccorso wrote: > Hi Andreas, > > On Mon, Mar 02, 2020 at 01:45:04PM +, Debian Bug Tracking System wrote: > > Hello Andreas, > > > > I think I've fixed these bugs indeed, a few months ago. > > > > Regards, > > > > David. > > > > PS :

Processed: [bts-link] source package src:scikit-learn, src:python-skbio

2020-03-02 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org: > # > # bts-link upstream status pull for source package src:scikit-learn, > src:python-skbio > # see http://lists.debian.org/debian-devel-announce/2006/05/msg1.html > # https://bts-link-team.pages.debian.net/bts-link/ > # > user

_{~~~}EPH -Journal Paper in Biological & Pharmaceutical Science-<<<<---->>>>

2020-03-02 Thread aamirkhan
EPH JOURNAL Hello Sir, mam EPH JOURNAL will welcome articles from the field of all specialities of clinical, as well as basic medical science (medicine, surgery, ophthalmology, gynaecology and obstetrics, psychiatry, anaesthesia, paediatrics, orthopaedics, microbiology, pathology and laboratory

Bug#944769: python3-h5py fails to import if offline due to apparent MPI failure

2020-03-02 Thread Thibaut Paumard
Le 01/03/2020 à 20:26, Drew Parsons a écrit : > your h5py suggestion of [...] > works up to a point. Hi Drew, Do I read correctly in your other mail that you have found a workaround? My first take would have been to apply my initial suggestion to each individual sub-module but that depends on

Processing of pycollada_0.6-2_source.changes

2020-03-02 Thread Debian FTP Masters
pycollada_0.6-2_source.changes uploaded successfully to localhost along with the files: pycollada_0.6-2.dsc pycollada_0.6-2.debian.tar.xz pycollada_0.6-2_source.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing

Re: Comments regarding tensorflow_2.0.0-1_amd64.changes

2020-03-02 Thread M. Zhou
Eigen3 is used in the core math part of tensorflow. I have limited energy to patch these parts from time to time whenever eigen3 gets updated. I dislike introducing burden to myself. Please reject it so I can get rid of this burden permanently. On Tue, Mar 3, 2020 at 04:26 Sean Whitton wrote:

tensorflow_2.0.0-1_amd64.changes REJECTED

2020-03-02 Thread Sean Whitton
Per uploader's request. === Please feel free to respond to this email if you don't understand why your files were rejected, or if you upload new files which address our concerns. -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net

Bug#952996: Removed package(s) from unstable

2020-03-02 Thread Debian FTP Masters
We believe that the bug you reported is now fixed; the following package(s) have been removed from unstable: gle-graphics |4.2.5-7 | source gle-graphics | 4.2.5-7+b1 | amd64, arm64, armel, armhf, i386, mips64el, mipsel, ppc64el, s390x --- Reason --- RoQA;

gl2ps 1.4.0+dfsg1-3 MIGRATED to testing

2020-03-02 Thread Debian testing watch
FYI: The status of the gl2ps source package in Debian's testing distribution has changed. Previous version: 1.4.0+dfsg1-2 Current version: 1.4.0+dfsg1-3 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you

Re: Comments regarding tensorflow_2.0.0-1_amd64.changes

2020-03-02 Thread Sean Whitton
Hello Mo, On Tue 03 Mar 2020 at 08:23AM +08, M. Zhou wrote: > Eigen3 is used in the core math part of tensorflow. I have limited energy > to patch these parts from time to time whenever eigen3 gets updated. I > dislike introducing burden to myself. > > Please reject it so I can get rid of this

Re: Comments regarding tensorflow_2.0.0-1_amd64.changes

2020-03-02 Thread M. Zhou
The fact is that if embedded code copies were prohibited, I can list a couple of source packages to purge from the archive. And that would demotivate more contributors. The point is that, sometimes disentangling the embedded code from the upstream source can cost much greater amount of time and

mathgl 2.4.4-6 MIGRATED to testing

2020-03-02 Thread Debian testing watch
FYI: The status of the mathgl source package in Debian's testing distribution has changed. Previous version: 2.4.4-5 Current version: 2.4.4-6 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive

Re: Comments regarding tensorflow_2.0.0-1_amd64.changes

2020-03-02 Thread Sean Whitton
Hello Mo, On Tue 03 Mar 2020 at 04:13AM +00, M. Zhou wrote: > The fact is that if embedded code copies were prohibited, > I can list a couple of source packages to purge from the archive. > And that would demotivate more contributors. > > The point is that, sometimes disentangling the embedded

sagemath 9.0-2 MIGRATED to testing

2020-03-02 Thread Debian testing watch
FYI: The status of the sagemath source package in Debian's testing distribution has changed. Previous version: 9.0-1 Current version: 9.0-2 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive

eigen3 3.3.7-2 MIGRATED to testing

2020-03-02 Thread Debian testing watch
FYI: The status of the eigen3 source package in Debian's testing distribution has changed. Previous version: 3.3.7-1 Current version: 3.3.7-2 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will receive

Bug#935720: marked as done (gle-graphics: needs manual search for libgs.so)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Tue, 03 Mar 2020 03:18:50 + with message-id and subject line Bug#952996: Removed package(s) from unstable has caused the Debian Bug report #935720, regarding gle-graphics: needs manual search for libgs.so to be marked as done. This means that you claim that the problem has

Bug#935913: marked as done (gle-graphics: qgle segfaults when modifying text strings)

2020-03-02 Thread Debian Bug Tracking System
Your message dated Tue, 03 Mar 2020 03:18:50 + with message-id and subject line Bug#952996: Removed package(s) from unstable has caused the Debian Bug report #935913, regarding gle-graphics: qgle segfaults when modifying text strings to be marked as done. This means that you claim that the

seaborn 0.10.0-1 MIGRATED to testing

2020-03-02 Thread Debian testing watch
FYI: The status of the seaborn source package in Debian's testing distribution has changed. Previous version: 0.9.0-2 Current version: 0.10.0-1 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you will

Processing of pyzoltan_1.0.1-1_amd64.changes

2020-03-02 Thread Debian FTP Masters
pyzoltan_1.0.1-1_amd64.changes uploaded successfully to localhost along with the files: pyzoltan_1.0.1-1.dsc pyzoltan_1.0.1.orig.tar.gz pyzoltan_1.0.1-1.debian.tar.xz python3-pyzoltan-dbgsym_1.0.1-1_amd64.deb python3-pyzoltan_1.0.1-1_amd64.deb pyzoltan_1.0.1-1_amd64.buildinfo

Bug#874901: [GLE-devel] Probable fix for qgle seg faults with latest ghostscript versions

2020-03-02 Thread Moritz Mühlenhoff
On Mon, Jan 20, 2020 at 08:29:16PM +0100, Moritz Mühlenhoff wrote: > On Fri, Oct 11, 2019 at 11:12:31PM +0200, Moritz Mühlenhoff wrote: > > On Fri, Sep 13, 2019 at 07:54:04PM +0200, Francesco Poli wrote: > > > > Right now I see three possible "fixes" for the libgs problem: > > > [...] > > > > -

Re: Comments regarding tensorflow_2.0.0-1_amd64.changes

2020-03-02 Thread Sean Whitton
Hello Mo, On Mon 02 Mar 2020 at 01:27AM +00, M. Zhou wrote: > There are two embedded source tarballs: > 1. abseil-cpp: the upstream (google) development model makes >it unsuitable for debian packaging. This is a mandatory >dependency of tensorflow. hence the embedded tarball. Thanks.

Processing of giac_1.5.0.87+dfsg1-3_source.changes

2020-03-02 Thread Debian FTP Masters
giac_1.5.0.87+dfsg1-3_source.changes uploaded successfully to localhost along with the files: giac_1.5.0.87+dfsg1-3.dsc giac_1.5.0.87+dfsg1-3.debian.tar.xz giac_1.5.0.87+dfsg1-3_source.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) --

giac_1.5.0.87+dfsg1-3_source.changes ACCEPTED into unstable

2020-03-02 Thread Debian FTP Masters
Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Tue, 03 Mar 2020 08:34:07 +0100 Source: giac Architecture: source Version: 1.5.0.87+dfsg1-3 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Julien Puydt Changes: giac

Re: Comments regarding tensorflow_2.0.0-1_amd64.changes

2020-03-02 Thread M. Zhou
On Tue, 3 Mar 2020 at 05:04, Sean Whitton wrote: > My worry about these embedded code copies is maintainability. We do not > have great tools for finding, nor updating, all the embedded copies of a > library. So each time we introduce an embedded code copy then we are > making it harder to fix

plplot 5.15.0+dfsg-12 MIGRATED to testing

2020-03-02 Thread Debian testing watch
FYI: The status of the plplot source package in Debian's testing distribution has changed. Previous version: 5.15.0+dfsg-7 Current version: 5.15.0+dfsg-12 -- This email is automatically generated once a day. As the installation of new packages into testing happens multiple times a day you