python-xarray 0.9.6-1 MIGRATED to testing

[Debian testing watch]

FYI: The status of the python-xarray source package
in Debian's testing distribution has changed.

  Previous version: (not in testing)
  Current version:  0.9.6-1

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netgen is marked for autoremoval from testing

[Debian testing autoremoval watch]

netgen 4.9.13.dfsg-11 is marked for autoremoval from testing on 2018-03-02

It is affected by these RC bugs:
889003: netgen: netgen FTBFS with libtogl-dev 2.0-1


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eigen3_3.3.4-4_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 08 Feb 2018 21:21:09 +0100
Source: eigen3
Binary: libeigen3-dev libeigen3-doc
Architecture: source
Version: 3.3.4-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 libeigen3-dev - lightweight C++ template library for linear algebra
 libeigen3-doc - eigen3 API documentation
Changes:
 eigen3 (3.3.4-4) unstable; urgency=medium
 .
   [ Gael Guennebaud ]
   * [8038706] Fix gcc7 warning: Wint-in-bool-context.
 .
   [ Anton Gladky ]
   * [303a17a] Set Standards-Version to 4.1.3
   * [ea5c809] Remove testsuite-field in d/control
   * [5d43f27] Set compat-level 11
   * [8a9f17a] Set priority optional instead of extra
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 51206465994aa3d52d515d0d31e5667549fd1129 2188 eigen3_3.3.4-4.dsc
 2baf17c38255b2c1e80bb0520a315edf80982aaf 44568 eigen3_3.3.4-4.debian.tar.xz
 8f984062b89f068142563f03d890eb89c8adf4dc 6967 eigen3_3.3.4-4_source.buildinfo
Checksums-Sha256:
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 56a54f2bc11359501f7a61c975390d639c353f36fc0e0c1df590cd8127043e0e 6967 
eigen3_3.3.4-4_source.buildinfo
Files:
 dfe2bdeb2d2a77c986e485cb89d04b5c 2188 libdevel optional eigen3_3.3.4-4.dsc
 4f8dfa06451484f7b59a6ec057a5b419 44568 libdevel optional 
eigen3_3.3.4-4.debian.tar.xz
 f2647b546013476e1c72230c43a6f3b7 6967 libdevel optional 
eigen3_3.3.4-4_source.buildinfo

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Thank you for your contribution to Debian.

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Accepted eigen3 3.3.4-4 (source) into unstable

[Anton Gladky]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 08 Feb 2018 21:21:09 +0100
Source: eigen3
Binary: libeigen3-dev libeigen3-doc
Architecture: source
Version: 3.3.4-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Anton Gladky 
Description:
 libeigen3-dev - lightweight C++ template library for linear algebra
 libeigen3-doc - eigen3 API documentation
Changes:
 eigen3 (3.3.4-4) unstable; urgency=medium
 .
   [ Gael Guennebaud ]
   * [8038706] Fix gcc7 warning: Wint-in-bool-context.
 .
   [ Anton Gladky ]
   * [303a17a] Set Standards-Version to 4.1.3
   * [ea5c809] Remove testsuite-field in d/control
   * [5d43f27] Set compat-level 11
   * [8a9f17a] Set priority optional instead of extra
Checksums-Sha1:
 51206465994aa3d52d515d0d31e5667549fd1129 2188 eigen3_3.3.4-4.dsc
 2baf17c38255b2c1e80bb0520a315edf80982aaf 44568 eigen3_3.3.4-4.debian.tar.xz
 8f984062b89f068142563f03d890eb89c8adf4dc 6967 eigen3_3.3.4-4_source.buildinfo
Checksums-Sha256:
 83cdceb0249d063984d43dcb6c8803ef1518d7f15764ef5362dab9980e64b3b8 2188 
eigen3_3.3.4-4.dsc
 37108f240488e9185e17f357742e41b390b78ccce148f0ccd722f4c1b905a285 44568 
eigen3_3.3.4-4.debian.tar.xz
 56a54f2bc11359501f7a61c975390d639c353f36fc0e0c1df590cd8127043e0e 6967 
eigen3_3.3.4-4_source.buildinfo
Files:
 dfe2bdeb2d2a77c986e485cb89d04b5c 2188 libdevel optional eigen3_3.3.4-4.dsc
 4f8dfa06451484f7b59a6ec057a5b419 44568 libdevel optional 
eigen3_3.3.4-4.debian.tar.xz
 f2647b546013476e1c72230c43a6f3b7 6967 libdevel optional 
eigen3_3.3.4-4_source.buildinfo

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Bug#889931: python-cartopy FTBFS with proj 5.0.0

[Bas Couwenberg]

Source: python-cartopy
Version: 0.14.2+dfsg1-2
Severity: important
Tags: upstream
User: debian-...@lists.debian.org
Usertags: proj-5.0

Dear Maintainer,

Your package FTBFS due to missing compatibility with Proj 5.0.0:

 ==
 FAIL: cartopy.tests.crs.test_mercator.test_central_longitude
 --
 Traceback (most recent call last):
   File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
 self.test(*self.arg)
   File 
"/build/python-cartopy-0.14.2+dfsg1/.pybuild/pythonX.Y_2.7/build/cartopy/tests/crs/test_mercator.py",
 line 72, in test_central_longitude
 [-20037508, -15496570, 20037508, 18764656], decimal=0)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 563, in 
assert_almost_equal
 return assert_array_almost_equal(actual, desired, decimal, err_msg)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 962, in 
assert_array_almost_equal
 precision=decimal)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 778, in 
assert_array_compare
 raise AssertionError(msg)
 AssertionError: 
 Arrays are not almost equal to 0 decimals
 
 (mismatch 25.0%)
  x: array([-20037508., -15496571., -20037508.,  18764656.])
  y: array([-20037508, -15496570,  20037508,  18764656])
 
 ==
 FAIL: cartopy.tests.crs.test_robinson.test_transform_point
 --
 Traceback (most recent call last):
   File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
 self.test(*self.arg)
   File 
"/build/python-cartopy-0.14.2+dfsg1/.pybuild/pythonX.Y_2.7/build/cartopy/tests/crs/test_robinson.py",
 line 49, in test_transform_point
 assert_arr_almost_eq(result, (2376187.27182751, 7275317.81573085), _TOL)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 962, in 
assert_array_almost_equal
 precision=decimal)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 778, in 
assert_array_compare
 raise AssertionError(msg)
 AssertionError: 
 Arrays are not almost equal to 7 decimals
 
 (mismatch 100.0%)
  x: array([ 2376187.2757334,  7275317.7120387])
  y: array([ 2376187.2718275,  7275317.8157309])
 
 ==
 FAIL: cartopy.tests.crs.test_robinson.test_transform_points
 --
 Traceback (most recent call last):
   File "/usr/lib/python2.7/dist-packages/nose/case.py", line 197, in runTest
 self.test(*self.arg)
   File 
"/build/python-cartopy-0.14.2+dfsg1/.pybuild/pythonX.Y_2.7/build/cartopy/tests/crs/test_robinson.py",
 line 66, in test_transform_points
 [[2376187.27182751, 7275317.81573085, 0]], _TOL)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 962, in 
assert_array_almost_equal
 precision=decimal)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 778, in 
assert_array_compare
 raise AssertionError(msg)
 AssertionError: 
 Arrays are not almost equal to 7 decimals
 
 (mismatch 66.67%)
  x: array([[ 2376187.2757334,  7275317.7120387,0.   ]])
  y: array([[ 2376187.2718275,  7275317.8157309,0.   ]])
 
 ==
 FAIL: test_default (cartopy.tests.crs.test_transverse_mercator.TestOSNI)
 --
 Traceback (most recent call last):
   File 
"/build/python-cartopy-0.14.2+dfsg1/.pybuild/pythonX.Y_2.7/build/cartopy/tests/crs/test_transverse_mercator.py",
 line 104, in test_default
 386984.15347340))
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 962, in 
assert_array_almost_equal
 precision=decimal)
   File "/usr/lib/python2.7/dist-packages/numpy/testing/utils.py", line 778, in 
assert_array_compare
 raise AssertionError(msg)
 AssertionError: 
 Arrays are not almost equal to 6 decimals
 
 (mismatch 100.0%)
  x: array([ 275614.267627,  386984.20643 ])
  y: array([ 275614.871056,  386984.153473])
 
 --

The full build log is attached.

The severity of this issue will be increased to serious when the Proj
5.0 transition starts.

Kind Regards,

Bas
dpkg-checkbuilddeps: error: Unmet build dependencies: python-pyshp 
python-shapely (>= 1.5.6) python3-all-dev python3-nose python3-pyshp 
python3-shapely (>= 1.5.6)
W: Unmet build-dependency in source
dh clean --with python2,python3 --buildsystem=pybuild
   dh_testdir -O--buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/home/bas/tmp/debian/python-cartopy-0.14.2+dfsg1'
dh_auto_clean || true
I: 

Processing of eigen3_3.3.4-4_source.changes

[Debian FTP Masters]

eigen3_3.3.4-4_source.changes uploaded successfully to localhost
along with the files:
  eigen3_3.3.4-4.dsc
  eigen3_3.3.4-4.debian.tar.xz
  eigen3_3.3.4-4_source.buildinfo

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

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Bug#889878: closed by Picca Frédéric-Emmanuel <pi...@debian.org> (Bug#889878: fixed in hkl 5.0.0.2449-1)

[Adrian Bunk]

Control: reopen -1

On Thu, Feb 08, 2018 at 11:12:07AM +, Debian Bug Tracking System wrote:
>...
>  hkl (5.0.0.2449-1) unstable; urgency=medium
>  .
>* New upstream version 5.0.0.2449 (Closes: #889878)
>...
> Source: hkl
> Version: 5.0.0.2447-1
> Severity: serious
> 
> https://buildd.debian.org/status/package.php?p=hkl=sid
> 
> ...
> make[4]: Entering directory '/<>/Documentation/figures'
> gcc -DHAVE_CONFIG_H -I. -I../..  -Wextra -D_DEFAULT_SOURCE -I../.. 
> -I../../hkl -I/usr/include/glib-2.0 
> -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/glib-2.0 
> -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include -Wdate-time 
> -D_FORTIFY_SOURCE=2  -g -O2 -fdebug-prefix-map=/<>=. 
> -fstack-protector-strong -Wformat -Werror=format-security -c -o sirius.o 
> sirius.c
> /bin/bash ../../libtool  --tag=CC   --mode=link gcc  -g -O2 
> -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 
> -Werror=format-security 
> -Wl,--whole-archive,../../hkl/.libs/libhkl.a,--no-whole-archive -Wl,-z,relro 
> -Wl,--as-needed -o sirius sirius.o ../../hkl/libhkl.la 
> ../../hkl/api2/libhkl2.la -lglib-2.0 -lgobject-2.0 -lglib-2.0 
> -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lyaml 
> libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. 
> -fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive 
> -Wl,../../hkl/.libs/libhkl.a -Wl,--no-whole-archive -Wl,-z -Wl,relro 
> -Wl,--as-needed -o .libs/sirius sirius.o  ../../hkl/.libs/libhkl.so 
> ../../hkl/api2/.libs/libhkl2.a -lgobject-2.0 -lglib-2.0 
> -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lyaml
> cd . && ./sirius
> Makefile:728: recipe for target 'sirius-stamp' failed
> make[4]: *** [sirius-stamp] Segmentation fault
>...

This seems to be fixed on arm64 only and still FTBFS on 
amd64/ppc64el/s390x:
  https://buildd.debian.org/status/package.php?p=hkl=sid

cu
Adrian

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   "Is there not promise of rain?" Ling Tan asked suddenly out
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   "Only a promise," Lao Er said.
   Pearl S. Buck - Dragon Seed

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Processed: Re: Bug#889878 closed by Picca Frédéric-Emmanuel <pi...@debian.org> (Bug#889878: fixed in hkl 5.0.0.2449-1)

[Debian Bug Tracking System]

Processing control commands:

> reopen -1
Bug #889878 {Done: Picca Frédéric-Emmanuel } [src:hkl] hkl 
FTBFS on amd64/arm64/ppc64el/s390x: sirius segfaults
'reopen' may be inappropriate when a bug has been closed with a version;
all fixed versions will be cleared, and you may need to re-add them.
Bug reopened
No longer marked as fixed in versions hkl/5.0.0.2449-1.

-- 
889878: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=889878
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Contact ow...@bugs.debian.org with problems

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Re: Rheolef moved to Git : problem to download/edit the debian files

[Boris Pek]

Hi Pierre,

>> You need to register an account on salsa.debian.org and ask for
>> membership of Debian Science team. You also need to create your
>> personal Gitlab token.
>
> Ok, I'am asking for membership of Debian Science team
> together with an account on salsa.debian.org
> Who is managing this ?

First, you are using a wrong mailing list: write to
 instead of
.

Next, read our documentation please:
https://wiki.debian.org/Salsa/Doc#Users:_Login_and_Registration
https://wiki.debian.org/DebianScience#How_to_join

It should decrease the number of questions.

Best wishes,
Boris


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Re: Rheolef moved to Git : problem to download/edit the debian files

[Pierre Saramito]

Hi Andreas,

> You need to register an account on salsa.debian.org and ask for
> membership of Debian Science team.  You also need to create your
> personal Gitlab token.

Ok, I'am asking for membership of Debian Science team 
together with an account on salsa.debian.org 
Who is managing this ?

Many thanks for your help,

Pierre
--
pierre.saram...@imag.fr
Directeur de Recherche CNRS
Laboratoire Jean Kuntzmann, Grenoble, France
http://ljk.imag.fr/membres/Pierre.Saramito

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Re: Rheolef moved to Git : problem to download/edit the debian files

[Andreas Tille]

Hi Pierre,

On Thu, Feb 08, 2018 at 10:34:50AM +0100, Pierre Saramito wrote:
> Many thanks for your rewrite and modernization 
> of the Debian files for the Rheolef package in rheolef-6.7-5.

You are welcome.
 
> For build time tests to run correctly,
> I have now to patch these files,
> but I have a technical problem:
> 
>   After the move from SVN to GIT of the package, I am no more able to 
> download & edit the files. 
> 
> I need to download, edit and upload the debian files,
> but I dont have any account on sources.debian.org 

You need to register an account on salsa.debian.org and ask for
membership of Debian Science team.  You also need to create your
personal Gitlab token.  Once this is setup you can simply do

   gbp clone g...@salsa.debian.org:science-team/rheolef.git
 
>   Any idea how to solve this in a simple way ?

Hope this helps.  Please keep on asking if you have trouble with details
but make sure you stick to the mailing list since I'm currently
traveling.
 
> Many thanks for your help for the Debianization of the package,
 
You are welcome

   Andreas. 

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Bug#889878: marked as done (hkl FTBFS on amd64/arm64/ppc64el/s390x: sirius segfaults)

[Debian Bug Tracking System]

Your message dated Thu, 08 Feb 2018 11:09:16 +
with message-id 
and subject line Bug#889878: fixed in hkl 5.0.0.2449-1
has caused the Debian Bug report #889878,
regarding hkl FTBFS on amd64/arm64/ppc64el/s390x: sirius segfaults
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
889878: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=889878
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: hkl
Version: 5.0.0.2447-1
Severity: serious

https://buildd.debian.org/status/package.php?p=hkl=sid

...
make[4]: Entering directory '/<>/Documentation/figures'
gcc -DHAVE_CONFIG_H -I. -I../..  -Wextra -D_DEFAULT_SOURCE -I../.. -I../../hkl 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include 
-I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 
-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 
-Werror=format-security -c -o sirius.o sirius.c
/bin/bash ../../libtool  --tag=CC   --mode=link gcc  -g -O2 
-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 
-Werror=format-security 
-Wl,--whole-archive,../../hkl/.libs/libhkl.a,--no-whole-archive -Wl,-z,relro 
-Wl,--as-needed -o sirius sirius.o ../../hkl/libhkl.la 
../../hkl/api2/libhkl2.la -lglib-2.0 -lgobject-2.0 -lglib-2.0 
-L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lyaml 
libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. 
-fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive 
-Wl,../../hkl/.libs/libhkl.a -Wl,--no-whole-archive -Wl,-z -Wl,relro 
-Wl,--as-needed -o .libs/sirius sirius.o  ../../hkl/.libs/libhkl.so 
../../hkl/api2/.libs/libhkl2.a -lgobject-2.0 -lglib-2.0 
-L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lyaml
cd . && ./sirius
Makefile:728: recipe for target 'sirius-stamp' failed
make[4]: *** [sirius-stamp] Segmentation fault


Backtrace:

#0  generator_argp_ (ret=0xcdaab730) at ../../hkl/ccan/generator/generator.h:44
#1  trajectory_gen_generator__ (ret=0xcdaab730) at hkl2.c:246
#2  0x7f3078908d70 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#3  0x in ?? ()
--- End Message ---
--- Begin Message ---
Source: hkl
Source-Version: 5.0.0.2449-1

We believe that the bug you reported is fixed in the latest version of
hkl, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 889...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Picca Frédéric-Emmanuel  (supplier of updated hkl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 08 Feb 2018 11:32:39 +0100
Source: hkl
Binary: ghkl libhkl5 libhkl-dev libhkl-dbg libhkl-doc gir1.2-hkl-5.0
Architecture: source
Version: 5.0.0.2449-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Picca Frédéric-Emmanuel 
Description:
 ghkl   - diffractometer computation control application
 gir1.2-hkl-5.0 - diffractometer computation control library - gir binding
 libhkl-dbg - diffractometer computation control library - debug symbols
 libhkl-dev - diffractometer computation control library - development files
 libhkl-doc - diffractometer computation control library - documentation
 libhkl5- diffractometer computation control library
Closes: 889878
Changes:
 hkl (5.0.0.2449-1) unstable; urgency=medium
 .
   * New upstream version 5.0.0.2449 (Closes: #889878)
Checksums-Sha1:
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 6807df243259dd4527190b50bc86ded6b84f1053 4392017 hkl_5.0.0.2449.orig.tar.gz
 6102a175d34d5be53c4e3fe4537bf2437fe27bae 9192 hkl_5.0.0.2449-1.debian.tar.xz
Checksums-Sha256:
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hkl_5.0.0.2449-1.dsc
 fc5f5d066e817bd2b5011106b23599bf282fb7a40720aed238ac74a05049e71d 4392017 
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 e6da8b8f2d873ecf636885d16c5628610502a224013a7afd50ba903e367dfd4c 9192 
hkl_5.0.0.2449-1.debian.tar.xz
Files:
 760a595bc540657ebec1818ef0d91f04 2709 science optional hkl_5.0.0.2449-1.dsc
 

hkl_5.0.0.2449-1_source.changes ACCEPTED into unstable

[Debian FTP Masters]

Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 08 Feb 2018 11:32:39 +0100
Source: hkl
Binary: ghkl libhkl5 libhkl-dev libhkl-dbg libhkl-doc gir1.2-hkl-5.0
Architecture: source
Version: 5.0.0.2449-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Picca Frédéric-Emmanuel 
Description:
 ghkl   - diffractometer computation control application
 gir1.2-hkl-5.0 - diffractometer computation control library - gir binding
 libhkl-dbg - diffractometer computation control library - debug symbols
 libhkl-dev - diffractometer computation control library - development files
 libhkl-doc - diffractometer computation control library - documentation
 libhkl5- diffractometer computation control library
Closes: 889878
Changes:
 hkl (5.0.0.2449-1) unstable; urgency=medium
 .
   * New upstream version 5.0.0.2449 (Closes: #889878)
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 e6da8b8f2d873ecf636885d16c5628610502a224013a7afd50ba903e367dfd4c 9192 
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 54b2d507d1fe6ac02e6e1263b6579b1a 4392017 science optional 
hkl_5.0.0.2449.orig.tar.gz
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hkl_5.0.0.2449-1.debian.tar.xz

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Thank you for your contribution to Debian.

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Accepted hkl 5.0.0.2449-1 (source) into unstable

[Picca Frédéric-Emmanuel]

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 08 Feb 2018 11:32:39 +0100
Source: hkl
Binary: ghkl libhkl5 libhkl-dev libhkl-dbg libhkl-doc gir1.2-hkl-5.0
Architecture: source
Version: 5.0.0.2449-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Picca Frédéric-Emmanuel 
Description:
 ghkl   - diffractometer computation control application
 gir1.2-hkl-5.0 - diffractometer computation control library - gir binding
 libhkl-dbg - diffractometer computation control library - debug symbols
 libhkl-dev - diffractometer computation control library - development files
 libhkl-doc - diffractometer computation control library - documentation
 libhkl5- diffractometer computation control library
Closes: 889878
Changes:
 hkl (5.0.0.2449-1) unstable; urgency=medium
 .
   * New upstream version 5.0.0.2449 (Closes: #889878)
Checksums-Sha1:
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 6102a175d34d5be53c4e3fe4537bf2437fe27bae 9192 hkl_5.0.0.2449-1.debian.tar.xz
Checksums-Sha256:
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hkl_5.0.0.2449-1.dsc
 fc5f5d066e817bd2b5011106b23599bf282fb7a40720aed238ac74a05049e71d 4392017 
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 e6da8b8f2d873ecf636885d16c5628610502a224013a7afd50ba903e367dfd4c 9192 
hkl_5.0.0.2449-1.debian.tar.xz
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 760a595bc540657ebec1818ef0d91f04 2709 science optional hkl_5.0.0.2449-1.dsc
 54b2d507d1fe6ac02e6e1263b6579b1a 4392017 science optional 
hkl_5.0.0.2449.orig.tar.gz
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hkl_5.0.0.2449-1.debian.tar.xz

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Processing of hkl_5.0.0.2449-1_source.changes

[Debian FTP Masters]

hkl_5.0.0.2449-1_source.changes uploaded successfully to localhost
along with the files:
  hkl_5.0.0.2449-1.dsc
  hkl_5.0.0.2449.orig.tar.gz
  hkl_5.0.0.2449-1.debian.tar.xz

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

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Bug#889886: neuron FTBFS on !x86/ppc: #error "This code has only been tested on x86 and powerpc platforms."

[Adrian Bunk]

Source: neuron
Version: 7.5-1
Severity: important

https://buildd.debian.org/status/package.php?p=neuron=sid

...
In file included from ../../src/Random123/features/compilerfeatures.h:213:0,
 from ../../src/Random123/philox.h:37,
 from nrnran123.c:7:
../../src/Random123/features/gccfeatures.h:38:4: error: #error "This code has 
only been tested on x86 and powerpc platforms."
 #  error "This code has only been tested on x86 and powerpc platforms."
^


The supported platforms already cover all combinations of
32/64bit and big/little endian, making it unlikely that
the package would be completely broken everywhere else.

It builds for me on arm64 after removing the #error block.

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Bug#888879: Rheolef moved to Git : problem to download/edit the debian files

[Pierre Saramito]

Hi Andreas,

Many thanks for your rewrite and modernization 
of the Debian files for the Rheolef package in rheolef-6.7-5.

For build time tests to run correctly,
I have now to patch these files,
but I have a technical problem:

  After the move from SVN to GIT of the package, I am no more able to download 
& edit the files. 

I need to download, edit and upload the debian files,
but I dont have any account on sources.debian.org 

  Any idea how to solve this in a simple way ?

Many thanks for your help for the Debianization of the package,

Pierre
--
pierre.saram...@imag.fr
Directeur de Recherche CNRS
Laboratoire Jean Kuntzmann, Grenoble, France
http://ljk.imag.fr/membres/Pierre.Saramito

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Bug#889878: hkl FTBFS on amd64/arm64/ppc64el/s390x: sirius segfaults

[Adrian Bunk]

Source: hkl
Version: 5.0.0.2447-1
Severity: serious

https://buildd.debian.org/status/package.php?p=hkl=sid

...
make[4]: Entering directory '/<>/Documentation/figures'
gcc -DHAVE_CONFIG_H -I. -I../..  -Wextra -D_DEFAULT_SOURCE -I../.. -I../../hkl 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include 
-I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include 
-I/usr/include -Wdate-time -D_FORTIFY_SOURCE=2  -g -O2 
-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 
-Werror=format-security -c -o sirius.o sirius.c
/bin/bash ../../libtool  --tag=CC   --mode=link gcc  -g -O2 
-fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 
-Werror=format-security 
-Wl,--whole-archive,../../hkl/.libs/libhkl.a,--no-whole-archive -Wl,-z,relro 
-Wl,--as-needed -o sirius sirius.o ../../hkl/libhkl.la 
../../hkl/api2/libhkl2.la -lglib-2.0 -lgobject-2.0 -lglib-2.0 
-L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lyaml 
libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. 
-fstack-protector-strong -Wformat -Werror=format-security -Wl,--whole-archive 
-Wl,../../hkl/.libs/libhkl.a -Wl,--no-whole-archive -Wl,-z -Wl,relro 
-Wl,--as-needed -o .libs/sirius sirius.o  ../../hkl/.libs/libhkl.so 
../../hkl/api2/.libs/libhkl2.a -lgobject-2.0 -lglib-2.0 
-L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lyaml
cd . && ./sirius
Makefile:728: recipe for target 'sirius-stamp' failed
make[4]: *** [sirius-stamp] Segmentation fault


Backtrace:

#0  generator_argp_ (ret=0xcdaab730) at ../../hkl/ccan/generator/generator.h:44
#1  trajectory_gen_generator__ (ret=0xcdaab730) at hkl2.c:246
#2  0x7f3078908d70 in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#3  0x in ?? ()

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