Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]

2014-07-30 Thread Marlon Pierce
Hi Kenneth-- You should first build the entire Airavata project (mvn clean install at the top level). This should fix the missing dependency problems you see below. You can then do the java-client-samples only build as often as you want from there. I just verified this, but let us know if

Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]

2014-07-30 Thread K Yoshimoto
I get a different error now: java-client-samples$ mvn clean install -U -DskipTests=true -f pom.xml [INFO] Scanning for projects... [INFO] [INFO] [INFO] Building Airavata Client Samples 0.14-SNAPSHOT [INFO]

Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]

2014-07-30 Thread Marlon Pierce
Does it work if you use mvn -o clean install? What do you get when you run ls -tlr ~/.m2/repository/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/ ? Mine looks like this: mpierce$ ls -tlr ~/.m2/repository/org/apache/airavata/airavata-client-api/0.14-SNAPSHOT/ total 1432 -rw-r--r--

Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]

2014-07-30 Thread K Yoshimoto
On Wed, Jul 30, 2014 at 04:52:35PM -0400, Marlon Pierce wrote: Does it work if you use mvn -o clean install? I get a bunch of test failures, with or without -o. Should I be concerned about these? What do you get when you run ls -tlr

Re: Registering ec2 application with app catalog

2014-07-30 Thread Suresh Marru
Hi Nipun, Can you tell me what all information you will need to register EC2, Rackspace? Lets quickly add it instead of you reverting to a old code. Which all JClouds providers did you try from https://jclouds.apache.org/reference/providers/ ? Are you writing a generic JClouds GFac provider

Re: [SciGaP-Dev] CIPRES-Airavata integration proposal]]

2014-07-30 Thread Marlon Pierce
Your repo got mangled, probably from the first build. Just delete the contents of that directory and it should rebuild correctly. However, there may be other problems lurking, so I recommend moving ~/.m2 to ~/.m2-30July2104 or something and rebuild from scratch. Marlon On 7/30/14, 5:01 PM,

[jira] [Updated] (AIRAVATA-1333) Can we have a way of searching for all the projects, experiments in the gateway?

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-1333?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-1333: --- Fix Version/s: (was: 0.13) 0.14 Can we have a way of searching

Re: [DISCUSS] Issues mailing list

2014-07-30 Thread Suresh Marru
With no objections I will request a issues mailing list to be created. If you think its a bad idea, please gripe. Suresh On Jul 22, 2014, at 8:36 AM, Marlon Pierce marpi...@iu.edu wrote: +1 On 7/22/14, 6:47 AM, Suresh Marru wrote: Hi All, To keep the dev list focussed on discussions

[jira] [Updated] (AIRAVATA-281) Simple tutorial documentation and built-in test cases of the For-Each feature needs to be added to the website when For-Each is ready.

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-281?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-281: -- Fix Version/s: (was: 0.13) WISHLIST Simple tutorial documentation

[jira] [Updated] (AIRAVATA-282) Simple tutorial documentation and built-in test cases of the Provenance feature needs to be added to the website.

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-282?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-282: -- Fix Version/s: (was: 0.13) WISHLIST Simple tutorial documentation

[jira] [Resolved] (AIRAVATA-1119) JPARegistry tests are failing

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-1119?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru resolved AIRAVATA-1119. Resolution: Fixed These tests seem to pass now. JPARegistry tests are failing

[jira] [Updated] (AIRAVATA-251) Integrate launched mechanim for foreach- parallel job submissions with the EC2 with oversubscribing

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-251?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-251: -- Fix Version/s: (was: 0.13) WISHLIST Integrate launched mechanim for

[jira] [Closed] (AIRAVATA-331) Need to develop shadow MPI applications that illustrate basic executions on XSEDE and similar grids.

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-331?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru closed AIRAVATA-331. - Resolution: Fixed Refer - https://github.com/SciGaP/XSEDE-Job-Scripts Need to develop shadow

[jira] [Closed] (AIRAVATA-330) Create shadow applications that exercise the execution, host, and service description and execution facilities of airavata

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-330?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru closed AIRAVATA-330. - Resolution: Fixed These samples exist but outside the scope of Airavata. Refer scripts by

[jira] [Resolved] (AIRAVATA-388) Store the fine grain workflow status in registry and when user load the workflow we should do coloring based on the status

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-388?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru resolved AIRAVATA-388. --- Resolution: Won't Fix The code base using these features changed significantly. Store

[jira] [Updated] (AIRAVATA-402) Optional outputs from a application

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-402?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-402: -- Fix Version/s: (was: 0.13) 0.14 Optional outputs from a application

[jira] [Updated] (AIRAVATA-433) Providing Airavata API method to cancel a running job

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-433?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-433: -- Fix Version/s: (was: 0.13) 0.15 Providing Airavata API method to

Re: Embedded ZK

2014-07-30 Thread Lahiru Gunathilake
Hi Danushka, Thats the plan. Regards Lahiru On Tue, Jul 29, 2014 at 1:51 PM, Danushka Menikkumbura danushka.menikkumb...@gmail.com wrote: Nice! :-) I suggest we do a quick perf test just to get a sense of it. Danushka On Tue, Jul 29, 2014 at 11:09 PM, Lahiru Gunathilake

Re: [DISCUSS] Issues mailing list

2014-07-30 Thread Lahiru Gunathilake
+1 On Wed, Jul 30, 2014 at 5:53 PM, Suresh Marru sma...@apache.org wrote: With no objections I will request a issues mailing list to be created. If you think its a bad idea, please gripe. Suresh On Jul 22, 2014, at 8:36 AM, Marlon Pierce marpi...@iu.edu wrote: +1 On 7/22/14, 6:47

[jira] [Updated] (AIRAVATA-439) GFAC/Orchestrator exception handling and notifications

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-439?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-439: -- Fix Version/s: (was: 0.13) 0.15 GFAC/Orchestrator exception

[jira] [Updated] (AIRAVATA-461) Allow users skip the workflow Nodes which already ran and invoke the rest of the Nodes

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-461?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru updated AIRAVATA-461: -- Fix Version/s: (was: 0.13) 0.14 Allow users skip the workflow Nodes

[jira] [Resolved] (AIRAVATA-454) Stopping Airavata service make Xbaya notification client give lot of errors.

2014-07-30 Thread Suresh Marru (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-454?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Suresh Marru resolved AIRAVATA-454. --- Resolution: Won't Fix Since ws-messenger is not bundled with latest code bases, this is

[jira] [Commented] (AIRAVATA-465) ability to interact with outputs from individual tasks while executing

2014-07-30 Thread Pamidighantam, Sudhakar V (JIRA)
[ https://issues.apache.org/jira/browse/AIRAVATA-465?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanelfocusedCommentId=14080260#comment-14080260 ] Pamidighantam, Sudhakar V commented on AIRAVATA-465: I will be out