Re: [External] [DISCUSS] New name for MFT

2023-01-31 Thread Pierce, Marlon
How about a ship theme? Here’s a list of types of ships: https://en.wikipedia.org/wiki/List_of_ship_types. A couple of ancient types of ships: Kerkouros, Corbita. Marlon From: Suresh Marru Date: Monday, January 30, 2023 at 5:59 PM To: Airavata Dev Subject: [External] [DISCUSS] New name for

Re: [External] Regarding Airavata Seagrid Rich Client

2022-06-28 Thread Pierce, Marlon
Hi Aishwarya, sorry for late reply, but this is really nice progress. Marlon From: Aishwarya Sinhasane Date: Tuesday, June 21, 2022 at 9:21 PM To: dev@airavata.apache.org Subject: [External] Regarding Airavata Seagrid Rich Client This message was sent from a non-IU address. Please exercise

Re: [External] github PRs for lib upgrades

2022-04-05 Thread Pierce, Marlon
Hi PJ, thanks for the nudge, we will review. Marlon From: PJ Fanning Date: Tuesday, April 5, 2022 at 7:11 AM To: dev@airavata.apache.org Subject: [External] github PRs for lib upgrades [You don't often get email from fannin...@apache.org. Learn why this is important at

Re: [External] Data Catalog into its own repo

2020-11-10 Thread Pierce, Marlon
, Pierce, Marlon wrote: +1 for this refactoring. On 11/9/20, 9:47 AM, "Pamidighantam, Sudhakar" wrote: This message was sent from a non-IU address. Please exercise caution when clicking links or opening attachments from external sources. --- +2. Thanks, Sudhakar.

Re: [External] Re: Data Catalog into its own repo

2020-11-09 Thread Pierce, Marlon
+1 for this refactoring. On 11/9/20, 9:47 AM, "Pamidighantam, Sudhakar" wrote: This message was sent from a non-IU address. Please exercise caution when clicking links or opening attachments from external sources. --- +2. Thanks, Sudhakar. On 11/9/20, 9:37 AM,

Re: [External] Re: Project Update and Questions

2020-06-12 Thread Pierce, Marlon
Hi Nick, One specific observation about this particular client: the uploaded KML file needs to have a URL that can be consumed by your mapping API—it needs to have a URL. Also, you need to watch out for caching when displaying the file—if a user uploads a new version of the file with the

Re: [External] Project Update and Questions

2020-05-22 Thread Pierce, Marlon
Hi Nick, Based on off-list feedback, I suggest you verify that the KML sources used in GeoGateway will work with Leaflet.  Give this part a chance to fail fast. Someone else will need to weigh in your third bullet, and your fourth bullet may need more details. Marlon From:

Gateways 2020 Call for Participation

2020-05-08 Thread Pierce, Marlon
Hi all, See below for the Gateways 2020 call for participation. This is a great venue for publicizing your work building science gateways and developing science gateway software. Thanks, Marlon -- Call for Participation: Gateways 2020 (October 19–21, Bethesda,

Gateways 2020 Call for Participation (Tutorials deadline extended to May 5)

2020-04-24 Thread Pierce, Marlon
Hi all, Please see the announcement below. If you are developing a science gateway, please consider submitting a paper, tutorial, or poster. Thanks, Marlon --- Call for Participation: Gateways 2020 (October 19–21, Bethesda, Maryland) is now accepting submissions.

FW: [External] Today's webinar—Building Gateways with Apache Airavata Software & SciGaP

2020-04-08 Thread Pierce, Marlon
Hi all, If you are interested, we have an Apache Airavata webinar today at 1 pm US ET. This will be recorded if you want to watch later. Thanks, Marlon Building Science Gateways with Apache Airavata Software and SciGaP Platform Services Presented by Marlon Pierce, Director,

Apache Airavata developer position

2019-03-28 Thread Pierce, Marlon
Hi all, We have an open position in the Science Gateways Research Center at Indiana University for Airavata developers, solution experts, and frontend developers for Airavata using Django (https://github.com/apache/airavata-django-portal). If you are interested, please see

Re: [VOTE] Apache Airavata release 0.17 - RC1

2019-03-22 Thread Pierce, Marlon
+1 From: "dimuthu.upeks...@gmail.com" Reply-To: dev Date: Thursday, March 21, 2019 at 9:33 AM To: dev Subject: Re: [VOTE] Apache Airavata release 0.17 - RC1 +1 On Thu, Mar 21, 2019 at 1:07 AM Suresh Marru wrote: Apache Airavata PMC is pleased to call for a vote on the following

Re: [DISCUSS] Apache Airavata release 0.17 - RC1

2019-03-22 Thread Pierce, Marlon
I verified the release signatures and built the code on Mac OSX 10.14.x with Java 1.8 and Maven 3.6, so I’m +1 for the release, voted on the [VOTE) thread. Marlon From: "dimuthu.upeks...@gmail.com" Reply-To: dev Date: Thursday, March 21, 2019 at 1:55 AM To: dev Subject: Re:

Gateways 2019 Call for Participation

2019-03-19 Thread Pierce, Marlon
HI all Please see the Gateways 2019 conference call for participation below. Thanks, Marlon === GATEWAYS 2019 Call for Participation September 23–25, 2019 San Diego, California http://sciencegateways.org/gateways2019/call We welcome

Re: Need to contribute to Airavata

2019-02-21 Thread Pierce, Marlon
Hi Asanka, you need to make a pull request. Marlon On 2/21/19, 1:38 PM, "Asanka Sanjaya" wrote: Hi Suresh, Could you please add me as a developer to the airavata-custos repository ( https://github.com/apache/airavata-custos)? I have created a project with the profile

Re: Metascheduler work

2018-12-17 Thread Pierce, Marlon
Hi Dimuthu, This is something we should re-evaluate. Mangirish Wangle looked at Mesos integration with Airavata back in 2016, but he ultimately ran into many difficulties, including getting MPI jobs to work, if I recall correctly. Marlon From: "dimuthu.upeks...@gmail.com"

Re: Unused modules

2018-11-30 Thread Pierce, Marlon
Can you move these to an “archive” directory or make an “archive” branch?  It may be useful to easily find these for future reference. Marlon From: "dimuthu.upeks...@gmail.com" Reply-To: dev Date: Friday, November 30, 2018 at 8:29 AM To: dev Subject: Re: Unused modules Hi

Apache Airavata developer position

2018-10-02 Thread Pierce, Marlon
Hi all, We have positions open for Apache Airavata developers, solution experts, and integrators open at the Science Gateways Research Center at Indiana University. Our generic position announcement is here: https://iujobs.peopleadmin.com/postings/67282. We are looking for people with a

FW: [WSSSPE] BSSw Fellowship open for applications

2018-09-10 Thread Pierce, Marlon
Possibly of interest. Marlon On 9/10/18, 10:26 AM, "WSSSPE on behalf of David E. Bernholdt" wrote: Dear Colleague, We would like to draw your attention to the Better Scientific Software (BSSw) Fellowship program, the main goal of which is to foster and promote

Gateways 2018 Conference Information

2018-07-10 Thread Pierce, Marlon
Hi all-- Please see below for information on Gateways 2018, including discounts for early registration.  Note also there is still time to submit a poster. Thanks, Marlon -- GATEWAYS 2018 Tuesday through Thursday, September 25–27, 2018 Hosted at

Re: [GSoC] Re-architect Output Data Parsing into Airavata core

2018-06-22 Thread Pierce, Marlon
Yes, +1 on the detailed email summaries. Marlon From: Suresh Marru Reply-To: "dev@airavata.apache.org" Date: Friday, June 22, 2018 at 8:46 AM To: Airavata Dev Cc: Supun Nakandala Subject: Re: [GSoC] Re-architect Output Data Parsing into Airavata core Hi Lahiru, Thank you

FW: [ctsc-announce-l] Trusted CI Webinar May 21st at 11am ET: The EU General Data Protection Regulation (GDPR)

2018-05-07 Thread Pierce, Marlon
Hi all, I want to draw your attention to this seminar. Marlon From: "Dopheide, Jeannette M" Reply-To: "ctsc-announc...@list.iu.edu" Date: Monday, May 7, 2018 at 9:04 AM To: "announceme...@trustedci.org"

FW: Gateways 2018 CFP: Extended to May 16!

2018-04-30 Thread Pierce, Marlon
Hi all, I hope you will consider submitting to the Gateways 2018 conference.  Deadline extension below. Thanks, Marlon From: Science Gateways Community Institute

Re: C++ Client SDK with Airavata 0.17

2018-04-25 Thread Pierce, Marlon
Thanks, Vasanth.  Do you have a proof of concept that demonstrates your solution, or is a pull request appropriate?  Note also I suggest you repost with the content of your google doc in the email message itself for future references. These emails are publically archived and are searchable.

FW: 3/14 Webinar: Sustaining Science Gateways—Finding your "best fit" model

2018-03-13 Thread Pierce, Marlon
Hi all, See below and please consider calling in. As many of you know, Nancy Maron is one of the principal presenters at SGCI’s Incubator Bootcamp. Thanks, Marlon From: Science Gateways Community Institute

Gateways 2018 Call for Participation

2018-03-09 Thread Pierce, Marlon
Call for Participation: Gateways 2018 (September 25–27, at the University of Texas at Austin) is now accepting submissions of papers, demos, tutorials, and panels (2–4 pages) on the topic of science or engineering gateways. Gateways are user-friendly interfaces to scientific computing,

Re: [DISCUSS] SEAGrid Rich Client to Airavata

2017-11-17 Thread Pierce, Marlon
We have seen the interest. I’m wondering how much work needs to be done to generalize the current SEAGrid desktop tools so that they are easily deployable by new gateway tenants. Marlon From: Suresh Marru Reply-To: "dev@airavata.apache.org"

Re: Linked Container Services for Apache Airavata Components - Phase 2 - Initial Prototype

2017-11-02 Thread Pierce, Marlon
cNRkWkE=10=PLkz1SCf5iB4enAR00Z46JwY9GGkaS2NON [6] https://github.com/apache/airavata-sandbox/tree/master/airavata-kubernetes/modules/microservices/api-server/src/main/java/org/apache/airavata/k8s/api/server On Thu, Nov 2, 2017 at 2:52 AM, Pierce, Marlon <marpi...@iu.edu> wrote: H

Re: Linked Container Services for Apache Airavata Components - Phase 2 - Initial Prototype

2017-11-01 Thread Pierce, Marlon
Hi Dimuthu, Thanks for sending this very thoughtful document. A couple of comments: * Use of Kafka instead of RabbitMQ is interesting. Can you say more about how this approach can handle Kafka client failures?  For RabbitMQ, for example, there is the simple “Work Queue” approach in which

FW: Gateways 2017: Early-bird rates until Sept. 1; register by Th., Oct. 12

2017-08-22 Thread Pierce, Marlon
Hi all, Registration for the Gateways 2017 conference is now open! I hope you are able to attend, and please also share this with others who may be interested. Thanks, Marlon From: Science Gateways Community Institute

Re: Using Redis or Zookeeper for Email Monitoring

2017-07-20 Thread Pierce, Marlon
Agreed. I think some architecture diagrams are in order.  Marlon From: "Shenoy, Gourav Ganesh" Reply-To: "dev@airavata.apache.org" Date: Thursday, July 20, 2017 at 1:35 PM To: "dev@airavata.apache.org" Subject: Re:

Re: Adios

2017-06-16 Thread Pierce, Marlon
Thanks, Ajinkya, and good luck.  You are always welcome here on the dev list to share any insights. Marlon From: Ajinkya Dhamnaskar Date: Friday, June 16, 2017 at 2:12 PM To: Airavata Dev Subject: Adios Hello All, I am stepping

Re: XML tips

2017-06-02 Thread Pierce, Marlon
Hi Apoorv, how are you using XML, and what do you want to do? Marlon From: Apoorv Palkar Reply-To: "dev@airavata.apache.org" Date: Friday, June 2, 2017 at 10:51 AM To: "dev@airavata.apache.org" Subject: XML tips

Re: Apache Flink Execution

2017-05-24 Thread Pierce, Marlon
Thanks, Apoorv.  Note for everyone else: request access if you’d like to leave a comment or make a suggestion. Marlon From: Apoorv Palkar Reply-To: "dev@airavata.apache.org" Date: Wednesday, May 24, 2017 at 11:32 AM To:

Re: Storm Analysis

2017-05-23 Thread Pierce, Marlon
Thank you, Apoorv, for the Storm and Spark analysis.  Can you move these docs to either the Airavata Confluence Wiki or to Google Docs and post the link?  Marlon From: Apoorv Palkar Reply-To: "dev@airavata.apache.org" Date: Monday, May

Re: [VOTE] enables writes to Airavata GitHub mirror

2017-05-23 Thread Pierce, Marlon
Thanks, Suresh, this looks like a nice summary.  I’m +1 for GitHub for the pros you list below. None of the cons look like blockers. Marlon From: Suresh Marru Reply-To: "dev@airavata.apache.org" Date: Monday, May 22, 2017 at 1:16 PM To:

Improperly labeling output data staging failures

2017-05-22 Thread Pierce, Marlon
I’ve noticed jobs failing during the output data staging step that still get marked as “completed” rather than failed.  Failures were most likely caused by SCP timeouts to a very slow host. Looking at the code, outputDataStaging() [1] doesn’t call the checkFailures() [2] method like

Re: [GSoC] Number of Deliverables

2017-03-30 Thread Pierce, Marlon
Discussing those better ways on the dev list is also encouraged.  No plans every stay the same. The value of plans is the process of planning, not the plan itself, as someone else has said. Marlon From: Supun Nakandala Reply-To: "dev@airavata.apache.org"

Re: List of Devops Scripts for Apache Airavata

2017-03-10 Thread Pierce, Marlon
Re: Marcus’s second bullet. Separating these into separate branches puts the burden on using CI/CD. Marlon From: "Christie, Marcus Aaron" Reply-To: "dev@airavata.apache.org" Date: Friday, March 10, 2017 at 11:54 AM To:

FW: [sgci-mgmt] Webinar announcement to circulate to XSEDE, Campus Champions, etc.

2017-01-31 Thread Pierce, Marlon
Hi all, please see the Webinar announcement below.  This is open to anyone who is interested. Marlon -- For circulation: The next SGCI Webinar will take place February 8, 2017, at 1 pm Eastern/10 am Pacific (1 hour). Register:

FW: International Workshop on Science Gateways 2017 CFP, Poznan, Poland

2017-01-20 Thread Pierce, Marlon
Hi all, In case you are interested, here is a science gateways conference coming up. Marlon On 1/20/17, 12:25 PM, "XSEDE User News" wrote: A new message has been posted to XSEDE User News. Categories: Science Gateways, Conferences Start time: 19 Jun,

Re: Improving the PGA Install

2017-01-06 Thread Pierce, Marlon
+1 in general for this “requirement”. I was thinking the same thing. From: "Christie, Marcus Aaron" Reply-To: "dev@airavata.apache.org" Date: Friday, January 6, 2017 at 2:20 PM To: "dev@airavata.apache.org" Subject: Re:

Re: Database Version Control for Airavata

2016-12-23 Thread Pierce, Marlon
+1 for looking into Liquibase. I’d be interested to hear other opinions. Marlon From: Anuj Bhandar Reply-To: "dev@airavata.apache.org" Date: Friday, December 23, 2016 at 12:55 PM To: "dev@airavata.apache.org"

Science Gateway Sustainability Workshop

2016-12-21 Thread Pierce, Marlon
Hi all, I want to draw your attention to the opportunity below. This is not directly an Apache Airavata-related workshop, but we will be covering the Apache Way and general best practices for open source project management and governance. Thanks, Marlon The

Apache Jenkins emails

2016-10-15 Thread Pierce, Marlon
How about directing the Jenkins messages to the “issues” or another list besides dev@airavata? Marlon smime.p7s Description: S/MIME cryptographic signature

Re: Running MPI jobs on Mesos based clusters

2016-10-13 Thread Pierce, Marlon
BSD is ok: https://www.apache.org/legal/resolved. From: Mangirish Wagle Reply-To: "dev@airavata.apache.org" Date: Thursday, October 13, 2016 at 12:03 PM To: "dev@airavata.apache.org" Subject: Re: Running MPI jobs

Re: Ansible script to deploy Airavata on AWS

2016-09-25 Thread Pierce, Marlon
Nice, thanks. I hope this makes deployments a lot easier. From: Shameera Rathnayaka Reply-To: "dev@airavata.apache.org" Date: Friday, September 23, 2016 at 10:05 PM To: dev Subject: Re: Ansible script to deploy

Re: Docker with Airavata

2016-09-01 Thread Pierce, Marlon
+1, go for it Colin. Marlon On 9/1/16, 11:02 AM, "Suresh Marru" wrote: Hi Colin, That will be a wonderful contribution. I do not think there will be one right way of using docker instead multiple possibilities. It will be great if we can brainstorm on this

Apache Airaveata-Related job openings

2016-07-25 Thread Pierce, Marlon
Hi all, The Indiana University Science Gateway Group has two job opens related to Apache Airavata, one for an experienced java developer and the other for a science gateway consultant. See [1] and [2]. You can contact me by email if you would like more information. Thanks, Marlon Pierce

Re: python 3 support

2016-07-07 Thread Pierce, Marlon
Hi Prady, have you gotten errors trying to use it? From: Prady Reply-To: "dev@airavata.apache.org" Date: Wednesday, July 6, 2016 at 11:13 PM To: "dev@airavata.apache.org" Subject: python 3 support Hi Devs, Does the apache

Re: [GSoC] Midterm Evaluations

2016-06-26 Thread Pierce, Marlon
Google doc is ok for now if you don’t have access to the wiki. Don’t let this be a blocker. We can migrate. From: Bikramjeet Singh Reply-To: "dev@airavata.apache.org" Date: Sunday, June 26, 2016 at 1:10 AM To: Airavata Dev

Re: Airavata with Ansible

2016-06-10 Thread Pierce, Marlon
+1, I encourage everyone to try this out. Eric says next step is the PGA. From: Suresh Marru Reply-To: "dev@airavata.apache.org" Date: Friday, June 10, 2016 at 2:14 PM To: Airavata Dev Subject: Re: Airavata with Ansible Hi

Re: Apache Aurora-Mesos Integration (Job Submission code)

2016-06-07 Thread Pierce, Marlon
+1 for investigating a native client instead of wrapping the command line. From: Suresh Marru Reply-To: "dev@airavata.apache.org" Date: Tuesday, June 7, 2016 at 4:08 PM To: Airavata Dev Subject: Re: Apache Aurora-Mesos

Re: Git Develop branch for Apache Aurora Integration

2016-06-03 Thread Pierce, Marlon
Hi Gourav, please share the script on the list and tell us more about what you are doing. From: Gourav Rattihalli Reply-To: "dev@airavata.apache.org" Date: Friday, June 3, 2016 at 5:17 PM To: "dev@airavata.apache.org"

Re: "Something went wrong message" during account confirmation on locally installed PGA

2016-06-03 Thread Pierce, Marlon
ill review the PGA app/controller code to find out what the actual error is, which is being generated from the PGA side. On Fri, Jun 3, 2016 at 4:02 PM, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: Did you find the problem? From: Abhishek Jain <ajai...@binghamt

Re: "Something went wrong message" during account confirmation on locally installed PGA

2016-06-03 Thread Pierce, Marlon
omething went wrong message" during account confirmation on locally installed PGA Sure will surely do that. On Friday, June 3, 2016, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: Please be sure to post the problem and solution. Marlon From: Supun Nakandala <supu

Re: "Something went wrong message" during account confirmation on locally installed PGA

2016-06-03 Thread Pierce, Marlon
Please be sure to post the problem and solution. Marlon From: Supun Nakandala Reply-To: "dev@airavata.apache.org" Date: Friday, June 3, 2016 at 11:23 AM To: dev Subject: Re: "Something went wrong message" during

Re: Airavata 0.16 Release Planning

2016-06-03 Thread Pierce, Marlon
ues.apache.org_jira_browse_AIRAVATA-2D1945=CwMFAg=8hUWFZcy2Z-Za5rBPlktOQ=7_-LbDwTKOoIiO4P4OLfUTX6lSdjys9jh2AJ7sBl9ag=R2ZVpIpwPyZsEiWW5Vb2qO6Fpy2bxRx2eeUVc32o0ws=HXTGQcfXi-0_JFcA-kExFEiEWO-XBIRLvYpHzs7ZFnQ=> before requesting feature freeze. Should not take long. Suresh On Mar 28, 2016, at 11:29 AM, Pierce, Marlon <

Re: Failed Sending Account Confirmation Email after Account Creation with local PGA - WSO2 IS set up

2016-05-27 Thread Pierce, Marlon
+1, thanks, Jeff! From: Abhishek Jain Reply-To: "dev@airavata.apache.org" Date: Friday, May 27, 2016 at 8:35 PM To: dev Subject: Re: Failed Sending Account Confirmation Email after Account Creation with local PGA - WSO2

Re: Trying to Set Up Molecular Dynamics Workflow

2016-05-23 Thread Pierce, Marlon
- Task >status changed CREATED -> EXECUTING >2016-05-23 11:15:01,095 [pool-8-thread-6] INFO >org.apache.airavata.orchestrator.server.OrchestratorServerHandler - >expId: juhygf_ff4b4196-aaa7-4e05-9dfd-74978e9cfa19, processId: >PROCESS_71118aff-fa37-449f-ae7f-fb170243d0bf :- Process

Re: java.lang.RuntimeException: Failed to create database connection pool

2016-05-19 Thread Pierce, Marlon
Pratik, can you confirm that the mysql.jar is correct, uncorrupted, etc? Use jar –tf or a similar command to list the contents. Marlon From: Eroma Abeysinghe Reply-To: "dev@airavata.apache.org" Date: Thursday, May 19, 2016 at 4:51 PM To:

Re: Problem in running airavata server in demon mode

2016-05-17 Thread Pierce, Marlon
See what your classpath is. Note we don’t normally test and run on Windows, so you may want to get a linux environment, virtual or otherwise. Marlon From: Ritesh Agarwal Reply-To: "dev@airavata.apache.org" Date: Tuesday, May 17, 2016 at 5:03 PM

Re: Unable to start Airavata server

2016-05-14 Thread Pierce, Marlon
Are you following the steps in http://airavata.readthedocs.io/en/latest/? From: Gowtham A R Reply-To: "dev@airavata.apache.org" Date: Friday, May 13, 2016 at 10:13 PM To: "dev@airavata.apache.org" Subject: Unable to start

Re: Broken link for Build Instruction

2016-05-12 Thread Pierce, Marlon
Hi Pratek, Thanks for finding that broken link. The full instructions can be found at http://airavata.readthedocs.io/en/latest/, which is for a full production deployment. For simpler testing of just Airavata with embedded DB, see for example

Connection timeout settings

2016-05-12 Thread Pierce, Marlon
We have an occasional issue of connection timeouts when performing remote SSH operations. This has a potentially bad side effect of successfully launching a large job but not getting back the Job ID. One straightforward fix is to use longer than the default connection timeout in the Jsch

Re: Planning for In-Situ Application and Resource Monitoring [GSoC Project]

2016-05-04 Thread Pierce, Marlon
lity as I am suggesting. Searching JIRA for these didn't turn up any information, and I'm curious about why these plans were abandoned, or if they were even related to my project. I'd appreciate any comments on the above! Best, Jeff K. On Wed, Apr 27, 2016 at 4:43 PM, Pierce, Marlon <marpi...@

Re: New version of Xbaya

2016-04-28 Thread Pierce, Marlon
You may want to look at https://github.com/SciGaP/seagrid-rich-client. This is a specific end application and outside Airavata, but it uses the API. On 4/28/16, 1:32 PM, "Bikramjeet Singh" wrote: >Hi all, >I will be working on developing XBaya which will be

Re: Planning for In-Situ Application and Resource Monitoring [GSoC Project]

2016-04-27 Thread Pierce, Marlon
RabbitMQ has first class support for Python, so that should not be a problem. Suresh already included the link. Suresh covered most of the bases already, so I’ll just reiterate that Airavata’s use of AMQP/RabbitMQ and Thrift should make it programming language independent. You can see how

Re: Design of Mesos/Aurora integration with Airavata on Jetstream

2016-04-27 Thread Pierce, Marlon
Hi Emre, are you looking at containerizing any of your applications? On 4/27/16, 1:21 PM, "Emre Brookes" <e...@biochem.uthscsa.edu> wrote: >Pierce, Marlon wrote: >> Thanks, Gourav, this is great. How will the design differ in the two >> cases? >>

Re: Design of Mesos/Aurora integration with Airavata on Jetstream

2016-04-27 Thread Pierce, Marlon
Thanks, Gourav, this is great. How will the design differ in the two cases? Since installing the applications is not a simple task and there aren’t good docker libraries (for example) for many of them, I would assume that we would have a collection of VMs that have the codes already installed.

Re: Jetstream VM creation through Airavata

2016-04-20 Thread Pierce, Marlon
Hi Emre, The current case is the first: manage VMs to run jobs for Airavata, coupled with an Apache Mesos-based scheduling of jobs within the VMs. We have a Jetstream VM with the PGA and Airavata installed there also. Marlon On 4/20/16, 6:34 PM, "Emre Brookes"

Re: [VOTE] New website and logo

2016-04-13 Thread Pierce, Marlon
e to add their suggestions to the issue. On Apr 7, 2016 2:39 PM, "Pierce, Marlon" <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: Also, I didn’t see a Jira so I created one, https://issues.apache.org/jira/browse/AIRAVATA-1950. If I missed the appropriate Jira, please point me to

Re: Website Redesign update

2016-04-07 Thread Pierce, Marlon
html files, those will get overwritten. We all need to get used to Jekyll. A simple rule of thumb will be only .md files are to be edited. All .html are generated files and should be considered read-only. Suresh On Apr 7, 2016, at 2:39 PM, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@i

Re: Website Redesign update

2016-04-07 Thread Pierce, Marlon
To: "dev@airavata.apache.org<mailto:dev@airavata.apache.org>" <dev@airavata.apache.org<mailto:dev@airavata.apache.org>> Subject: Re: Website Redesign update This is an expected warning since the default (and only) branch is asf-site. Git is looking for non exist

Re: Website Redesign update

2016-04-07 Thread Pierce, Marlon
checkout asf-site and you should be good. Suresh On Apr 7, 2016, at 2:12 PM, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: I am not able to check out: git clone https://git-wip-us.apache.org/repos/asf/airavata-site.git Cloning into 'airavata-site'... remote

Re: Website Redesign update

2016-04-07 Thread Pierce, Marlon
I am not able to check out: git clone https://git-wip-us.apache.org/repos/asf/airavata-site.git Cloning into 'airavata-site'... remote: Counting objects: 158, done. remote: Compressing objects: 100% (146/146), done. remote: Total 158 (delta 28), reused 104 (delta 9) Receiving objects:

Re: Airavata 0.16 Release Planning

2016-03-28 Thread Pierce, Marlon
Do we have any outstanding tasks that need to be wrapped up and committed to dev? From: Shameera Rathnayaka > Reply-To: "dev@airavata.apache.org" >

Re: [GSoC Proposal] In-Situ Simulation Monitoring and Analysis Using Apache Airavata

2016-03-25 Thread Pierce, Marlon
Agreed, looks good. Please update your submission. From: Suresh Marru > Reply-To: "dev@airavata.apache.org" > Date: Friday, March 25, 2016 at 12:32 PM To: Airavata

Re: [ GSOC prosposal ]

2016-03-25 Thread Pierce, Marlon
Jatin and others: please submit now. On 3/25/16, 8:06 AM, "Jatin Balodhi" wrote: >Hi Marlon, > >I've made changes to my GSOC proposal draft according to your comments. >Can you review it before i submit it to GSOC site . > >Thanks >Jatin

Re: [GSoC Proposal] Apache Airavata Monitoring Module

2016-03-24 Thread Pierce, Marlon
Hi Sidd, This is a well written proposal. Some comments: * The monitoring component doesn’t need to directly communicate with GFAC. There can be multiple GFACs, so the original GFAC that submitted the request may no longer be running. Also, other components may want to receive updates,

Re: GSoC proposal - Apache Airavata and Jupyter Integration on the Use Case for Molecular Dynamics

2016-03-24 Thread Pierce, Marlon
I commented on the document. I would like to see more concrete details of how Jupyter and Airavata will interact. See also general emails about describing your risks and risk mitigations, and how you will demonstrate that each 2 week milestone is completed. Marlon From: Ethan Suh

GSOC objectives and milestones

2016-03-24 Thread Pierce, Marlon
For all students: in your proposals, clearly state how you will demonstrate each 2 week milestone has been completed. How can we objectively review each milestone and conclude that you have accomplished what you wanted to accomplish? Think also of the risks for your proposal as a whole and

Re: Note to potential GSOC students

2016-03-24 Thread Pierce, Marlon
tential GSOC students Hi Marlon, I have submitted the draft of my proposal to ASF with Apache Airavata in the title, in the GSOC portal. Please let me know if you can see my draft. Thanks Jatin -- Forwarded message -- From: "Pierce, Marlon" <marpi...@iu.edu<m

Re: Note to potential GSOC students

2016-03-24 Thread Pierce, Marlon
" Apache Software Foundation proposal tag" what should i select there? Thanks Jatin Forwarded Message Subject: Re: Note to potential GSOC students Date: Wed, 23 Mar 2016 15:36:58 + From: Pierce, Marlon <marpi...@iu.edu><mailto:marpi...@iu.edu&

Re: [GSOC Proposal] Cloud based clusters for Apache Airavata

2016-03-23 Thread Pierce, Marlon
nt. Also the workflow orchestrator would be having the intelligence to figure out which jobs to be submitted to cloud based clusters. Please let me know whether my understanding is correct. Thank you. Best Regards, Mangirish Wagle On Tue, Mar 22, 2016 at 2:28 PM, Pierce, Marlon <marpi...@iu.edu

Re: [GSoC Proposal] - Integrating Resource Information from Apache Mesos with Apache Airavata’s Job Management Modules

2016-03-23 Thread Pierce, Marlon
les Hi Marlon, Here is the link that I have created. https://docs.google.com/document/d/1qtFvg4-usT4D_1TDNBsQDFQGZIkH99ideYQ1T3HU9nY/edit?usp=sharing The draft is created under the GSoC proposal site under Apache foundation with the same title. Thanks Pankaj On Mon, Mar 21, 2016 at 4:

Re: [GSoC Proposal] - Integrating Resource Information from Apache Mesos with Apache Airavata’s Job Management Modules

2016-03-22 Thread Pierce, Marlon
GZIkH99ideYQ1T3HU9nY/edit?usp=sharing The draft is created under the GSoC proposal site under Apache foundation with the same title. Thanks Pankaj On Mon, Mar 21, 2016 at 4:47 PM, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: Hi Pankaj, I have some commen

Re: [GSOC Proposal] Cloud based clusters for Apache Airavata

2016-03-22 Thread Pierce, Marlon
Hi Mangirish, please add your proposal to the GSOC 2016 site. From: Mangirish Wagle > Reply-To: "dev@airavata.apache.org" > Date: Thursday, March 17,

Re: GSOC proposal

2016-03-22 Thread Pierce, Marlon
t 2:01 PM To: "dev@airavata.apache.org<mailto:dev@airavata.apache.org>" <dev@airavata.apache.org<mailto:dev@airavata.apache.org>> Subject: Re: GSOC proposal Hello sir, Is it the UI part or the API implementation that needs to be detailed? Thanks On Tuesday, March 22, 2016

Re: GSOC proposal

2016-03-22 Thread Pierce, Marlon
Subject: Re: GSOC proposal Hello sir, Is it the UI part or the API implementation that needs to be detailed? Thanks On Tuesday, March 22, 2016, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: Hi Bikramjeet, Thanks for your interest. Your current proposal lacks a lot of

Re: Summary: Job Monitor Discussion

2016-03-22 Thread Pierce, Marlon
Hi Siddharth, you need to capture this and put it into your GSOC proposal application: https://cwiki.apache.org/confluence/display/AIRAVATA/%5BGSoC+Proposal%5D+Apache+Airavata+Monitoring+Module From: Siddharth Jain > Reply-To:

Re: GSOC proposal

2016-03-22 Thread Pierce, Marlon
e.org>> Subject: Re: GSOC proposal Hello, Yes sir I granted commenting permissions. Thanks On Mon, Mar 21, 2016 at 6:49 PM, Pierce, Marlon <marpi...@iu.edu<mailto:marpi...@iu.edu>> wrote: Hi Bikramjeet, Your proposal is a good start. I would like to make some comments inli

Re: GSoC Proposal: In-Situ Molecular Dynamics Data Analysis

2016-03-21 Thread Pierce, Marlon
HI Jeff, Please go ahead and start a draft proposal in the GSOC 2016 site. Thanks, Marlon From: Sandra Gesing > Reply-To: "dev@airavata.apache.org" > Date:

Re: [GSoC Proposal] - Integrating Job and Cloud Health Information of Apache Aurora with Apache Airavata

2016-03-21 Thread Pierce, Marlon
Hi Gourav, Please go ahead and submit a proposal draft through the GSOC 2016 web site. I personally recommend using the google doc option over posting the drafts to the Airavata wiki since I can make comments inline. Thanks, Marlon From: Gourav Rattihalli

Re: [GSoC Proposal] - Re-Factoring Apache Airavata Codebase to incorporate well-known object-oriented Design patterns and principles

2016-03-21 Thread Pierce, Marlon
Hi Abhishek, This is a good start but it will be easier to manage comments if you go ahead and start a draft proposal in the GSOC 2016 submission site. I prefer the google doc option to pointing to the Airavata wiki for proposal development since I can easily comment inline. Please make sure

Re: [GSoC Proposal] - Integrating Resource Information from Apache Mesos with Apache Airavata’s Job Management Modules

2016-03-21 Thread Pierce, Marlon
Hi Pankaj, I have some comments, but it would be easier if you created a proposal draft in the GSOC site. The google doc option for your draft is better than pointing to the Airavata wiki. Please make sure you give comment and suggestion permissions. Marlon From: Pankaj Saha

Re: [GSOC proposal] for web based workflow editor

2016-03-21 Thread Pierce, Marlon
Hi Jatin, you should set permissions to allow commenting and suggestion modes. On 3/21/16, 1:28 PM, "Jatin Balodhi" wrote: > >Hi Team, > >I have written a GSOC proposal for workflow Editor, can you guys please >review it once and give me feedback before i post it on

Re: Job Monitor POC

2016-03-21 Thread Pierce, Marlon
Thanks, Siddhartha. We will take a look but don’t wait for our evaluation before submitting your GSOC proposal draft. Marlon From: Siddharth Jain > Reply-To: "dev@airavata.apache.org"

Re: GSOC proposal

2016-03-21 Thread Pierce, Marlon
Hi Bikramjeet, Your proposal is a good start. I would like to make some comments inline in the google doc. Thanks, Marlon From: Bikramjeet Singh > Reply-To: "dev@airavata.apache.org"

Re: Summary: Job Monitor Discussion

2016-03-18 Thread Pierce, Marlon
Nice summary, Siddharth. From: Siddharth Jain > Reply-To: "dev@airavata.apache.org" > Date: Friday, March 18, 2016 at 9:06 PM To:

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