RE: Filtering disease term precisely from EventMention and loading MedDRA library for cTAKES

Hi Ganhdi - I think you may just have to gather all Snomed codes of interest, and then select only those terms that match. Snomed has a constraint language (https://confluence.ihtsdotools.org/display/DOCECL/A.1+Simple+Expression+Constraints+-+Valid+Expressions )that you can use to collect

RE: Filter CVD output? [EXTERNAL]

Thanks again Sean - I now have some nice html files with annotations popping up when hovering over them. "I would like to, in the future, mark up times, lists, and relations. For now, as long as the purpose is displaying mentions to a non-nlper and possibly even passing system output to

Re: Filter CVD output? [EXTERNAL]

It's a directory! Problem solved. Thanks Sean. And I will try out the FileTreeReader in it's place... Sent from Nine From: "Finan, Sean" Sent: 17 Jul 2017 21:08 To: dev@ctakes.apache.org Subject: RE:

Filter CVD output?

Hi - I spend a lot of time showing doctors the output of cTakes via what I have parsed during post processing. Problem being there is not context of where it is in the letter each term has been pulled from, visually anyway. It would be great if I could sit down and run a letter through the CVD

Re: Post co-ordinated SNOMED-CT with AggregatePlaintextFastUMLSProcessor

Hi Pete and Azad (good to hear from you Azad - I hope you enjoyed the conference in Swansea). Some excellent advice thank you and plenty to explore. I was going to get to work on some complicated xpath queries, but I'll try what you have both recommended first. All the best, Arron Lacey

Post co-ordinated SNOMED-CT with AggregatePlaintextFastUMLSProcessor

Hi, Just wondering if someone could point me in the direction of how ctakes produces post coordinated SNOMED-CT? Using the AggregatePlaintextFastUMLSProcessor the individual concepts come out write nicely, however if you take the following phrase "I went to the Epilepsy Clinic", I can't see