GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/174
Change test_train_split to train_test_split
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/165#discussion_r133772221
--- Diff: src/madpack/changelist.yaml ---
@@ -9,27 +9,39 @@
# file installed on the upgrade version. All other files (that don't have
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/166#discussion_r133094253
--- Diff: src/ports/postgres/modules/sample/test_train_split.py_in ---
@@ -0,0 +1,311 @@
+# coding=utf-8
+#
+# Licensed
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/166#discussion_r133094303
--- Diff: src/ports/postgres/modules/sample/test_train_split.py_in ---
@@ -0,0 +1,311 @@
+# coding=utf-8
+#
+# Licensed
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/166#discussion_r133093991
--- Diff: src/ports/postgres/modules/sample/test_train_split.sql_in ---
@@ -0,0 +1,321
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/167
Update RELEASE_NOTES for v1.12 release
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release
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/165#discussion_r132792819
--- Diff: deploy/gppkg/madlib.spec.in ---
@@ -7,7 +7,7 @@
BuildRoot: @MADLIB_GPPKG_RPM_SOURCE_DIR@
Summary:Apache MADlib
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/165#discussion_r132792193
--- Diff: deploy/gppkg/madlib.spec.in ---
@@ -7,7 +7,7 @@
BuildRoot: @MADLIB_GPPKG_RPM_SOURCE_DIR@
Summary:Apache MADlib
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/165
Release 1.12: Version numbering and upgrade related changes
Updates the version number to 1.12 for the release candidate.
Updates the changelists and other related files
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/162
GPDB 5 IC passes as well. LGTM
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/162#discussion_r132541348
--- Diff: src/ports/postgres/modules/convex/test/mlp.sql_in ---
@@ -241,9 +247,8 @@ SELECT mlp_predict(
select * from mlp_prediction
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/162#discussion_r132541507
--- Diff: src/ports/postgres/modules/convex/test/mlp.sql_in ---
@@ -241,9 +247,8 @@ SELECT mlp_predict(
select * from mlp_prediction
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/157
LGTM +1
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/158#discussion_r131209570
--- Diff: tool/jenkins/rat_check.sh ---
@@ -22,15 +22,16 @@
set -exu
workdir=`pwd`
+reponame=incubator-madlib
--- End
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/157
Tested on GPDB 4.3.12. kmeans IC fails with the following error:
```
SELECT * FROM kmeanspp('kmeans_2d', 'position', 10);
psql:/tmp/madlib.tPVzko/kmeans/test
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/154#discussion_r130721434
--- Diff: src/ports/postgres/modules/graph/bfs.py_in ---
@@ -47,8 +48,8 @@ def _validate_bfs(vertex_table, vertex_id, edge_table,
edge_params
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/154
@iyerr3 Do you have any other comments on this PR?
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/155
LGTM +1
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/154
Thanks for the comments. I'll fix them right away.
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/152#discussion_r129121134
--- Diff: src/ports/postgres/modules/graph/measures.sql_in ---
@@ -0,0 +1,820
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/152#discussion_r129096107
--- Diff: src/ports/postgres/modules/graph/test/measures.sql_in ---
@@ -0,0 +1,150
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/152#discussion_r129095148
--- Diff: src/ports/postgres/modules/graph/measures.sql_in ---
@@ -0,0 +1,820
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/151
Tested on OS X and Linux. LGTM
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/146
Closing the pull request since the proposed pipeline is too dependent on
the GPDB scripts.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/144
LGTM +1
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/144#discussion_r124611697
--- Diff: src/ports/postgres/modules/graph/wcc.sql_in ---
@@ -0,0 +1,261
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/144#discussion_r124604406
--- Diff: src/ports/postgres/modules/graph/test/wcc.sql_in ---
@@ -0,0 +1,92
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/142#discussion_r123856874
--- Diff: src/modules/recursive_partitioning/DT_impl.hpp ---
@@ -486,8 +485,18 @@ DecisionTree::expand(const Accumulator
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/142#discussion_r123618828
--- Diff: src/modules/recursive_partitioning/DT_impl.hpp ---
@@ -486,8 +485,18 @@ DecisionTree::expand(const Accumulator
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/142#discussion_r123577006
--- Diff: src/modules/recursive_partitioning/DT_impl.hpp ---
@@ -486,8 +485,18 @@ DecisionTree::expand(const Accumulator
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/142#discussion_r123573305
--- Diff: src/modules/recursive_partitioning/DT_impl.hpp ---
@@ -446,21 +446,20 @@ DecisionTree::updatePrimarySplit(
predictions.row
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/143
Sample: Add stratified sampling
JIRA: MADLIB-986
Add stratified sampling with the following options.
- With or without grouping
- With or without replacement
Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/140
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/136
@raghur1 I was trying to avoid the distinct on clause to speed up the
implementation but you are right to point this out, this output is not correct.
Should be fixed with my latest
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/136
Graph: Add APSP with grouping
JIRA: MADLIB-1099
- Add all pairs shortest path algorithm with grouping support.
This algorithm provides the minimum cost (sum of edge
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/133#discussion_r116803630
--- Diff:
src/ports/postgres/modules/recursive_partitioning/test/random_forest.sql_in ---
@@ -9,6 +9,8 @@ CREATE TABLE dt_golf
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/120#discussion_r112341893
--- Diff: src/modules/recursive_partitioning/decision_tree.cpp ---
@@ -235,7 +259,14 @@ dt_apply::run(AnyType & args){
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/121#discussion_r112305864
--- Diff: src/madpack/changelist_1.9.1_1.11.yaml ---
@@ -0,0 +1,126 @@
+# Changelist for MADlib version 1.9.1 to 1.11
--- End diff
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/119
Multiple: Minor changes for GPDB5 and HAWQ2.2 support
- Separate multi-command plpy.execute commands
- Disable some install check tests temporarily
You can merge this pull request
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111041205
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111040473
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111033008
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111038142
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/113
Graph: Add grouping support to SSSP
JIRA: MADLIB-1081
- This commit adds grouping support for SSSP as well as its path function.
You can merge this pull request into a Git
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108511453
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108298553
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108503192
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108299103
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/108#discussion_r10937
--- Diff: src/ports/postgres/modules/utilities/test/pivot.sql_in ---
@@ -168,3 +168,17 @@ SELECT pivot('pivset_ext', 'pivout', 'id', 'piv
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/105#discussion_r104527390
--- Diff: src/ports/postgres/modules/graph/graph_utils.py_in ---
@@ -0,0 +1,102 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/105#discussion_r104521502
--- Diff: src/ports/postgres/modules/graph/graph_utils.py_in ---
@@ -0,0 +1,102 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/105
Thanks for the comments @iyerr3. I tried to reorganize the algorithm
explanation a bit, please let me know what you think.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/106
LGTM +1
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100708801
--- Diff: pom.xml ---
@@ -393,6 +395,7 @@
src/ports/greenplum/cmake/FindGreenplum_4_2.cmake
src/ports
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100708526
--- Diff: configure ---
@@ -22,6 +22,24 @@ cmake "$@" ..
cd ..
cat <Makefile
+#
+# Licensed to the Ap
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100578729
--- Diff: pom.xml ---
@@ -393,6 +395,7 @@
src/ports/greenplum/cmake/FindGreenplum_4_2.cmake
src/ports
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100577189
--- Diff: pom.xml ---
@@ -45,6 +45,7 @@
ReadMe_Build.txt
ReleaseNotes.txt
licenses
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100578272
--- Diff: configure ---
@@ -22,6 +22,24 @@ cmake "$@" ..
cd ..
cat <Makefile
+#
+# Licensed to the Ap
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100577548
--- Diff: pom.xml ---
@@ -89,6 +90,7 @@
doc/design/modules/crf.tex
doc/design/modules/decision-trees.tex
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100577871
--- Diff: pom.xml ---
@@ -643,6 +646,8 @@
src/ports/postgres/modules/utilities/admin.py_in
src/ports
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/97
Release: Updates the release notes for v1.10.0.
Note that Release Date has to be updated after the release candidate is
approved.
You can merge this pull request into a Git repository
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/95
Sounds good, I'll add a warning as well. Actually, should we even allow the
user to attempt an upgrade from old versions?
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GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/95
Release v1.10:
- Updates the changelists and other related files for upgrade.
Note that upgrade is not supported from versions prior to 1.8.
- Removes hardcoded schema name
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/89
Hi @decibel, thanks for your comments. I removed the regex entirely and
replaced it with a built-in madlib function. I addressed your other comments as
well. Please let me know what you
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/90
RF: Fixes the online help and example
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GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/89
K-means: support for array input
JIRA: MADLIB-1018
Adds support for array input as data points. The function collates
the columns into a column in a temp table.
You can
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/87
LGTM +1
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/87#discussion_r97140449
--- Diff: src/ports/postgres/modules/assoc_rules/assoc_rules.py_in ---
@@ -504,3 +510,120 @@ def assoc_rules(madlib_schema, support, confidence
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/84
LGTM +1
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
We can try doing a screen share session but I am not sure what to look for.
For now, why don't you just prepare a draft of the documentation and I'll
compile them for you
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Not sure how to tackle. It is interesting that you don't get any actual
errors but a simple confirmation. It seems them makefile (generated by cmake)
doesn't even try to build anything
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
And the output of `make doc` is still the same?
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
If you start with a completely empty folder, what is the output of `cmake
../`?
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
You'll need doxygen in addition to latex to compile the docs.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Assuming the build folder is inside the `incubator-madlib` folder, try
`cmake ../`. Otherwise, give the madlib folder as input.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Let's try this. Create a new build folder and run the `cmake` command. Its
output should indicate if you can actually generate docs.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
It is under `doc/user/html` folder. Make sure to compile the code itself
with `make` before `make doc`.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Oh sorry, I meant run it in the build folder where you run `make`.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Yes, the section that starts with `@addtogroup` is the documentation that
will be reflected on the website when the pr is merged in the the repo. You
will need latex installed on your
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
I think it looks pretty good. We just have to add the documentation and
alter the online help. You can take a look at the `pivot.sql_in` file (or any
other function) as an example
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Yes, I just pulled them, I can see the licenses you added. I see there is a
madlib aggregate called mode (in utilities.sql_in). That and an altered search
path on my end might
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
When I run the install-check I get the following error.
```
select * from
madlib.knn('knn_train_data','data','label','knn_test_data','data','id
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/86
DT: Adds verbose option for the dot output format.
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r94081753
--- Diff: src/ports/postgres/modules/knn/test/knn.sql_in ---
@@ -0,0 +1,41 @@
+m4_include(`SQLCommon.m4
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93790128
--- Diff: src/ports/postgres/modules/knn/test/knn.sql_in ---
@@ -0,0 +1,41 @@
+m4_include(`SQLCommon.m4
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93789678
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93346118
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93346785
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93548578
--- Diff: src/ports/postgres/modules/knn/test/knn.sql_in ---
@@ -0,0 +1,41 @@
+m4_include(`SQLCommon.m4
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93548165
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/78#discussion_r93107178
--- Diff: src/ports/postgres/modules/graph/sssp.py_in ---
@@ -0,0 +1,372 @@
+# coding=utf-8
+#
+# Licensed to the Apache Software
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Yes that is the idea. I don't bother checking an edge unless its source
vertex has been updated in the last pass.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
@decibel I posted a pseudocode in the JIRA. Please let me know if that
clarifies why I needed the multilayered sql code.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Here is what I am thinking: We should create a new JIRA for SSSP Phase 2 to
explore plpgsql implementation with an array to replace `toupdate` and
`message` tables. I am not sure how
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Unfortunately, GPDB does not support RECURSIVE option in WITH clause.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
I'll put the pseudocode in the JIRA
(https://issues.apache.org/jira/browse/MADLIB-992)
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/78#discussion_r92069560
--- Diff: src/ports/postgres/modules/graph/sssp.py_in ---
@@ -0,0 +1,347 @@
+# coding=utf-8
+#
+# Licensed to the Apache Software
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/78#discussion_r92064461
--- Diff: src/ports/postgres/modules/graph/sssp.py_in ---
@@ -0,0 +1,347 @@
+# coding=utf-8
+#
+# Licensed to the Apache Software
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/68
Closing this pull request since the version number is already fixed.
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Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/68
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