Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/45
I cannot compile the code for greenplum 4.3 on OS X. It does work for
Postgres 9.4 on the same system. Here is the error:
[ 65%] Linking CXX shared module lib/libmadlib.so
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/47#discussion_r67949333
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -0,0 +1,201 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/47#discussion_r68130684
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -0,0 +1,201 @@
+# coding=utf-8
+#
+# Licensed to the Apache
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/47
Feature: Pivot Function
JIRA: MADLIB-908
The goal of the MADlib pivot function is to provide a data summarization
tool
that can do basic OLAP type operations on data
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/47#discussion_r67399048
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -0,0 +1,200 @@
+# coding=utf-8
+#
+# Licensed to the Apache
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/27
Release1.9alpha: Minor fixes for RC2
JIRA: MADLIB-972
-Modified LICENSE file for PyYAML license (MIT)
-Modified pom.xml to reflect the name change on linear_svm.sql_in
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/17
PCA: Proportion of variance for PCA training function
JIRA: MADLIB-948
- Added a new functionality where the user can specify the proportion of
variance to be covered
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/18
Release notes for 1.9alpha.
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/orhankislal/incubator-madlib
release19a/licenses
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/34
Release v1.9: Minor License Changes
JIRA: MADLIB-979
- Added UseLATEX license to LICENSE file
- Removed obsolete FindArmadillo.cmake file
- Fixed the license issue
Github user orhankislal commented on the pull request:
https://github.com/apache/incubator-madlib/commit/19f301d62acff3fa88787498e5bb55f630bca70a#commitcomment-16899389
In src/madpack/madpack.py:
In src/madpack/madpack.py on line 1223:
This change in the if check doesn't seem
Github user orhankislal commented on the pull request:
https://github.com/apache/incubator-madlib/commit/19f301d62acff3fa88787498e5bb55f630bca70a#commitcomment-16899915
In src/madpack/madpack.py:
In src/madpack/madpack.py on line 1223:
Yes, I copied your branch and applied my
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/36
Updated the version to 1.9dev
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GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/38
Random Forest: Fix filtered feature related bug
JIRA: MADLIB-928
Additional Author: Nandish Jayaram <njaya...@pivotal.io>
Random forest filters out a feature if
Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/37
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GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/37
Random Forest: Fix filtered feature related bug
JIRA: MADLIB-928
Random forest filters out a feature if it has the same value for every row.
If grouping is enabled this filer
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/39
Random Forest: Fix filtered feature related bug
JIRA: MADLIB-928
Additional Author: Nandish Jayaram <njaya...@pivotal.io>
Random forest filters out a feature if
Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/38
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Github user orhankislal commented on the pull request:
https://github.com/apache/incubator-madlib/pull/27#issuecomment-193398155
@rvs This is the pull request I mentioned. There is a small change in
LICENSE file to fix the issue with MIT license and I wanted to make sure the
language
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/41
Prediction Metrics: New module
JIRA: MADLIB-907
A collection of summary statistics to gauge model accuracy
based on predicted values vs. ground-truth values.
You can merge
Github user orhankislal commented on the pull request:
https://github.com/apache/incubator-madlib/pull/41#issuecomment-216651893
Thanks for your comments decibel. I'll close this pull request, review your
comments, update the code and documentation accordingly and create a new pull
Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/41
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Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/39
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/54#discussion_r71961520
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -58,66 +61,255 @@ def pivot(schema_madlib, source_table, out_table
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/54#discussion_r72856182
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -58,66 +61,256 @@ def pivot(schema_madlib, source_table, out_table
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/54#discussion_r72858556
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -58,66 +61,256 @@ def pivot(schema_madlib, source_table, out_table
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/54#discussion_r72857123
--- Diff: src/ports/postgres/modules/utilities/pivot.py_in ---
@@ -58,66 +61,256 @@ def pivot(schema_madlib, source_table, out_table
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/54
Out of 5 sql queries, I reduced the first 3 to single lines as you
suggested. For the other two I would rather keep them broken into a list since
they are created inside the 4 level
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/95
Release v1.10:
- Updates the changelists and other related files for upgrade.
Note that upgrade is not supported from versions prior to 1.8.
- Removes hardcoded schema name
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/97
Release: Updates the release notes for v1.10.0.
Note that Release Date has to be updated after the release candidate is
approved.
You can merge this pull request into a Git repository
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/95
Sounds good, I'll add a warning as well. Actually, should we even allow the
user to attempt an upgrade from old versions?
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GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/89
K-means: support for array input
JIRA: MADLIB-1018
Adds support for array input as data points. The function collates
the columns into a column in a temp table.
You can
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/90
RF: Fixes the online help and example
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/87#discussion_r97140449
--- Diff: src/ports/postgres/modules/assoc_rules/assoc_rules.py_in ---
@@ -504,3 +510,120 @@ def assoc_rules(madlib_schema, support, confidence
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/87
LGTM +1
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/89
Hi @decibel, thanks for your comments. I removed the regex entirely and
replaced it with a built-in madlib function. I addressed your other comments as
well. Please let me know what you
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100577548
--- Diff: pom.xml ---
@@ -89,6 +90,7 @@
doc/design/modules/crf.tex
doc/design/modules/decision-trees.tex
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100577189
--- Diff: pom.xml ---
@@ -45,6 +45,7 @@
ReadMe_Build.txt
ReleaseNotes.txt
licenses
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100578272
--- Diff: configure ---
@@ -22,6 +22,24 @@ cmake "$@" ..
cd ..
cat <Makefile
+#
+# Licensed to the Ap
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100578729
--- Diff: pom.xml ---
@@ -393,6 +395,7 @@
src/ports/greenplum/cmake/FindGreenplum_4_2.cmake
src/ports
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100577871
--- Diff: pom.xml ---
@@ -643,6 +646,8 @@
src/ports/postgres/modules/utilities/admin.py_in
src/ports
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100708801
--- Diff: pom.xml ---
@@ -393,6 +395,7 @@
src/ports/greenplum/cmake/FindGreenplum_4_2.cmake
src/ports
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/100#discussion_r100708526
--- Diff: configure ---
@@ -22,6 +22,24 @@ cmake "$@" ..
cd ..
cat <Makefile
+#
+# Licensed to the Ap
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/84
LGTM +1
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/105
Thanks for the comments @iyerr3. I tried to reorganize the algorithm
explanation a bit, please let me know what you think.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/106
LGTM +1
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/65
Thanks for the comments @iyerr3. I made the changes to clean up the code.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Hi @decibel, I was wondering if you would be interested in taking a look at
this PR. I would appreciate your comments/suggestions.
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Github user orhankislal closed the pull request at:
https://github.com/apache/incubator-madlib/pull/68
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/68
Closing this pull request since the version number is already fixed.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
I'll put the pseudocode in the JIRA
(https://issues.apache.org/jira/browse/MADLIB-992)
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/78#discussion_r92064461
--- Diff: src/ports/postgres/modules/graph/sssp.py_in ---
@@ -0,0 +1,347 @@
+# coding=utf-8
+#
+# Licensed to the Apache Software
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/78#discussion_r92069560
--- Diff: src/ports/postgres/modules/graph/sssp.py_in ---
@@ -0,0 +1,347 @@
+# coding=utf-8
+#
+# Licensed to the Apache Software
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Unfortunately, GPDB does not support RECURSIVE option in WITH clause.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Here is what I am thinking: We should create a new JIRA for SSSP Phase 2 to
explore plpgsql implementation with an array to replace `toupdate` and
`message` tables. I am not sure how
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Yes, I just pulled them, I can see the licenses you added. I see there is a
madlib aggregate called mode (in utilities.sql_in). That and an altered search
path on my end might
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
When I run the install-check I get the following error.
```
select * from
madlib.knn('knn_train_data','data','label','knn_test_data','data','id
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Let's try this. Create a new build folder and run the `cmake` command. Its
output should indicate if you can actually generate docs.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Assuming the build folder is inside the `incubator-madlib` folder, try
`cmake ../`. Otherwise, give the madlib folder as input.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
You'll need doxygen in addition to latex to compile the docs.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Yes, the section that starts with `@addtogroup` is the documentation that
will be reflected on the website when the pr is merged in the the repo. You
will need latex installed on your
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
It is under `doc/user/html` folder. Make sure to compile the code itself
with `make` before `make doc`.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
We can try doing a screen share session but I am not sure what to look for.
For now, why don't you just prepare a draft of the documentation and I'll
compile them for you
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
I think it looks pretty good. We just have to add the documentation and
alter the online help. You can take a look at the `pivot.sql_in` file (or any
other function) as an example
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
If you start with a completely empty folder, what is the output of `cmake
../`?
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
And the output of `make doc` is still the same?
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Oh sorry, I meant run it in the build folder where you run `make`.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/81
Not sure how to tackle. It is interesting that you don't get any actual
errors but a simple confirmation. It seems them makefile (generated by cmake)
doesn't even try to build anything
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/78
Graph: SSSP
JIRA: MADLIB-992
- Introduces a new module: Graph.
- Implements the single source shortest path algorithm (Bellman-Ford).
You can merge this pull request
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/86
DT: Adds verbose option for the dot output format.
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/orhankislal/incubator-madlib
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/78#discussion_r93107178
--- Diff: src/ports/postgres/modules/graph/sssp.py_in ---
@@ -0,0 +1,372 @@
+# coding=utf-8
+#
+# Licensed to the Apache Software
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93789678
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93790128
--- Diff: src/ports/postgres/modules/knn/test/knn.sql_in ---
@@ -0,0 +1,41 @@
+m4_include(`SQLCommon.m4
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r94081753
--- Diff: src/ports/postgres/modules/knn/test/knn.sql_in ---
@@ -0,0 +1,41 @@
+m4_include(`SQLCommon.m4
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93548578
--- Diff: src/ports/postgres/modules/knn/test/knn.sql_in ---
@@ -0,0 +1,41 @@
+m4_include(`SQLCommon.m4
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93346118
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93346785
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/81#discussion_r93548165
--- Diff: src/ports/postgres/modules/knn/knn.sql_in ---
@@ -0,0 +1,165
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
Yes that is the idea. I don't bother checking an edge unless its source
vertex has been updated in the last pass.
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Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/78
@decibel I posted a pseudocode in the JIRA. Please let me know if that
clarifies why I needed the multilayered sql code.
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Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/108#discussion_r10937
--- Diff: src/ports/postgres/modules/utilities/test/pivot.sql_in ---
@@ -168,3 +168,17 @@ SELECT pivot('pivset_ext', 'pivout', 'id', 'piv
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108503192
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108299103
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108511453
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/109#discussion_r108298553
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -0,0 +1,290 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111041205
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111033008
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111040473
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/112#discussion_r111038142
--- Diff: src/ports/postgres/modules/graph/pagerank.py_in ---
@@ -158,44 +313,198 @@ def pagerank(schema_madlib, vertex_table, vertex_id
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/121#discussion_r112305864
--- Diff: src/madpack/changelist_1.9.1_1.11.yaml ---
@@ -0,0 +1,126 @@
+# Changelist for MADlib version 1.9.1 to 1.11
--- End diff
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/120#discussion_r112341893
--- Diff: src/modules/recursive_partitioning/decision_tree.cpp ---
@@ -235,7 +259,14 @@ dt_apply::run(AnyType & args){
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/105#discussion_r104527390
--- Diff: src/ports/postgres/modules/graph/graph_utils.py_in ---
@@ -0,0 +1,102 @@
+# coding=utf-8
+#
+# Licensed to the Apache
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/105#discussion_r104521502
--- Diff: src/ports/postgres/modules/graph/graph_utils.py_in ---
@@ -0,0 +1,102 @@
+# coding=utf-8
+#
+# Licensed to the Apache
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/113
Graph: Add grouping support to SSSP
JIRA: MADLIB-1081
- This commit adds grouping support for SSSP as well as its path function.
You can merge this pull request into a Git
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/119
Multiple: Minor changes for GPDB5 and HAWQ2.2 support
- Separate multi-command plpy.execute commands
- Disable some install check tests temporarily
You can merge this pull request
Github user orhankislal commented on the issue:
https://github.com/apache/incubator-madlib/pull/157
Tested on GPDB 4.3.12. kmeans IC fails with the following error:
```
SELECT * FROM kmeanspp('kmeans_2d', 'position', 10);
psql:/tmp/madlib.tPVzko/kmeans/test
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/154#discussion_r130721434
--- Diff: src/ports/postgres/modules/graph/bfs.py_in ---
@@ -47,8 +48,8 @@ def _validate_bfs(vertex_table, vertex_id, edge_table,
edge_params
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/158#discussion_r131209570
--- Diff: tool/jenkins/rat_check.sh ---
@@ -22,15 +22,16 @@
set -exu
workdir=`pwd`
+reponame=incubator-madlib
--- End
GitHub user orhankislal opened a pull request:
https://github.com/apache/incubator-madlib/pull/167
Update RELEASE_NOTES for v1.12 release
You can merge this pull request into a Git repository by running:
$ git pull https://github.com/orhankislal/incubator-madlib
release
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/166#discussion_r133094253
--- Diff: src/ports/postgres/modules/sample/test_train_split.py_in ---
@@ -0,0 +1,311 @@
+# coding=utf-8
+#
+# Licensed
Github user orhankislal commented on a diff in the pull request:
https://github.com/apache/incubator-madlib/pull/166#discussion_r133094303
--- Diff: src/ports/postgres/modules/sample/test_train_split.py_in ---
@@ -0,0 +1,311 @@
+# coding=utf-8
+#
+# Licensed
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