Re: [easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

Thanks Kenneth and Bart, On 04/30/2018 03:24 PM, Kenneth Hoste wrote: On 30/04/2018 15:12, Ole Holm Nielsen wrote: On 04/30/2018 02:44 PM, Bart Oldeman wrote: Hello Ole, the issue is here: ld: cannot find -lpciaccess ld: cannot find -lxml2 to solve this you can either install OS packages (.rp

Re: [easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

On 04/30/2018 03:24 PM, Kenneth Hoste wrote: On 30/04/2018 15:12, Ole Holm Nielsen wrote: On 04/30/2018 02:44 PM, Bart Oldeman wrote: Hello Ole, the issue is here: ld: cannot find -lpciaccess ld: cannot find -lxml2 to solve this you can either install OS packages (.rpm, .deb, etc.) for libpci

Re: [easybuild] building TensorFlow doesn't respect job-cores

Dear Yann, On 30/04/2018 13:31, Yann Sagon wrote: Dear Kenneth, 2018-04-30 11:32 GMT+02:00 Kenneth Hoste >: Dear Yann, On 30/04/2018 11:28, Yann Sagon wrote: > I just noticed that building TF17 with cuda compute 6.0 and 6.1 doesn't > respect

Re: [easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

Hello Ole, you'd need the "-devel" packages too, e.g. libpciaccess-devel-0.13.4-3.1.el7_4.x86_64 you can install them as modules using EB, perhaps as hidden modules, it's your choice. Regards, Bart -- Dr. Bart E. Oldeman | bart.olde...@mcgill.ca | bart.olde...@calculquebec.ca Scientific Computi

Re: [easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

On 30/04/2018 15:12, Ole Holm Nielsen wrote: On 04/30/2018 02:44 PM, Bart Oldeman wrote: Hello Ole, the issue is here: ld: cannot find -lpciaccess ld: cannot find -lxml2 to solve this you can either install OS packages (.rpm, .deb, etc.) for libpciaccess and libxml2, and perhaps add them as OS

Re: [easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

On 04/30/2018 02:44 PM, Bart Oldeman wrote: Hello Ole, the issue is here: ld: cannot find -lpciaccess ld: cannot find -lxml2 to solve this you can either install OS packages (.rpm, .deb, etc.) for libpciaccess and libxml2, and perhaps add them as OS dependencies. Yes, I thought about this, bu

Re: [easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

Hello Ole, the issue is here: ld: cannot find -lpciaccess ld: cannot find -lxml2 to solve this you can either install OS packages (.rpm, .deb, etc.) for libpciaccess and libxml2, and perhaps add them as OS dependencies. Alternatively you can put in dependencies for ('libxml2', '2.9.8') and ('libp

Re: [easybuild] building TensorFlow doesn't respect job-cores

Dear Kenneth, 2018-04-30 11:32 GMT+02:00 Kenneth Hoste : > Dear Yann, > > On 30/04/2018 11:28, Yann Sagon wrote: > > I just noticed that building TF17 with cuda compute 6.0 and 6.1 doesn't > > respect the job-cores = 12 that I have in my config file. According to > > htop, it's using ~28 cores >

Re: [easybuild] building TensorFlow doesn't respect job-cores

Dear Yann, On 30/04/2018 11:28, Yann Sagon wrote: I just noticed that building TF17 with cuda compute 6.0 and 6.1 doesn't respect the job-cores = 12 that I have in my config file. According to htop, it's using ~28 cores Did you submit the TF build as a job using "eb --job"? The --job-cores co

[easybuild] EB 3.6.0: Build of iomkl-2018.02.eb fails on Intel Omni-Path systems

When we build on nodes with Intel Omni-Path software installed, the build of "iomkl" fails: $ eb iomkl-2018.02.eb -r == temporary log file in case of crash /tmp/eb-MDUNmr/easybuild-UxI3tr.log == resolving dependencies ... == processing EasyBuild easyconfig /home/modules/software/EasyBuild/3.6.0

[easybuild] building TensorFlow doesn't respect job-cores

I just noticed that building TF17 with cuda compute 6.0 and 6.1 doesn't respect the job-cores = 12 that I have in my config file. According to htop, it's using ~28 cores Best -- [image: Logo UNIGE] Yann Sagon Chef d'équipe HPC Division du système et des technologies de l'information et de la c