Re: [O] Babel: communicating irregular data to R source-code block

2012-04-26 Thread Thomas S. Dye
Michael Hannon jm_han...@yahoo.com writes: On Wednesday, April 25, 2012 at 4:52 PM Thomas S. Dye wrote: Michael Hannon jm_han...@yahoo.com writes: On Monday, April 23, 2012 at 11:44 PM Thomas S. Dye wrote: . . . The documentation of read.table has this: The number of data columns is

Re: [O] Makefile restructuring

2012-04-26 Thread Bastien
Hi Achim, Achim Gratz strom...@nexgo.de writes: Bastien writes: Please test this and report any problem while using make to install Org. Here's another refinement to make oldorg the default target unless local.mk is actively edited by the user. Applied, thanks. -- Bastien

Re: [O] error on opening org-file with #+startup: indent

2012-04-26 Thread Bastien
fkunze fku...@gmail.com writes: Augment the installation description (http://orgmode.org/manual/Installation.html#Installation) with a short description for windows users (that avoids the use of make). I'm not using Windows myself, but I would welcome a patch that clarifies the installation

Re: [O] Google Summer of Code -- 3 Org projects for our first participation!

2012-04-26 Thread Thorsten Jolitz
Neil Smithline emacs-orgm...@neilsmithline.com writes: Hi Neil, This is way cool! Recently I have been deeply irritated by the lack of a functional server for Emacs Org Mode. I've run into this problem dealing with the weak presentation of Org Mode files on Github. Github uses the Ruby gem

Re: [O] Google Summer of Code -- 3 Org projects for our first participation!

2012-04-26 Thread Bastien
Hi Neil, Neil Smithline emacs-orgm...@neilsmithline.com writes: I've run into this problem dealing with the weak presentation of Org Mode files on Github. Github uses the Ruby gem org-ruby (https://github.com/bdewey/org-ruby) to convert .org files to HTML. I've added a feature or two to

Re: [O] [beamer] When are :BEAMER_envargs: used or ignored?

2012-04-26 Thread Eric Fraga
James Harkins jamshar...@gmail.com writes: At Wed, 25 Apr 2012 18:09:18 +0800, James Harkins wrote: Whether it should be a feature request or not is debatable. The syntax is, at present, fairly straightforward in that the headline text becomes the argument to the environment defined.

Re: [O] Google Summer of Code -- 3 Org projects for our first participation!

2012-04-26 Thread Bastien
Hi Rasmus, Rasmus ras...@gmx.us writes: This could be huge. Would the `final' code be part of Org or Git-upstream? It will land in the UTILITIES/ directory of Org distribution and be available for download on orgmode.org, with docs on Worg. It will certainly be tested then used in the Worg

Re: [O] org-mode and google calendar

2012-04-26 Thread Bastien
Khoroshyy Petro khoros...@gmail.com writes: Just wanted to bring to your attention this mode. https://github.com/kiwanami/emacs-calfw Yes -- this is a great add-on, already advertized here. It would be nice to document this on http://orgmode.org/worg/ with a page displaying nice screenshots

Re: [O] Exporting to ACM format using new LaTeX exporter

2012-04-26 Thread Karl Voit
* Nicolas Goaziou n.goaz...@gmail.com wrote: Hello, Hi Nicolas! Karl Voit devn...@karl-voit.at writes: * Thomas S. Dye t...@tsdye.com wrote: Yea, that might be appropriate. So I set up a github repos: https://github.com/novoid/orgmode-ACM-template With the new exporter, I was

Re: [O] Updating BibTex file

2012-04-26 Thread Eric Fraga
Julian Burgos jul...@hafro.is writes: Dear list, How can I made org mode / reftex to recognize changes in my BibTex file? Here is the scenario. I have my default BibTex file defined with the reftex-default-bibliography variable. While working on my org mode document I am adding

Re: [O] Exporting to ACM format using new LaTeX exporter

2012-04-26 Thread Karl Voit
* Thomas S. Dye t...@tsdye.com wrote: Karl Voit devn...@karl-voit.at writes: https://github.com/novoid/orgmode-ACM-template Hi Karl, Hi! IIUC, you'd like to configure Org-mode to export a LaTeX file that is functionally equivalent to sigproc-sp.tex. Yes. If it is possible, I

Re: [O] [babel] hide inline source code blocks by results

2012-04-26 Thread Eric Fraga
Eric Schulte eric.schu...@gmx.com writes: Currently inline blocks like don't associate themselves with their results, they are only expected to be evaluated on export, so the functionality you suggest below would require first changing how results are associated with inline code blocks.

Re: [O] Disable links in Latex export

2012-04-26 Thread Eric Fraga
Nick Dokos nicholas.do...@hp.com writes: [...] If all you care about is the *appearance*, rather than the existence of links, however, you can use hyperref package options to influence that. For example \usepackage[pdfborder={0,0,0}]{hyperref} will get rid of the red boxes around the

Re: [O] Ever used org-mode contrib packages?

2012-04-26 Thread Eric Fraga
On Wed, Apr 11, 2012 at 21:22, François Allissonfranc...@allisson.co wrote: I'm curious to know what you are using from org-contrib... The only one I use currently is org-mime and even then only infrequently. However, this thread has spurred me on to have a look at org-collector as this

Re: [O] bug#11249: 24.1.50; Overlay with face property causes calendar buffer to scroll

2012-04-26 Thread Bastien
Hi Matt, Matt Lundin m...@imapmail.org writes: Note: It seems that adding the optional argument KEEPDATE is necessary for parsing to work. With the following line instead of the one above org-read-date works as expected: (org-eval-in-calendar '(setq cursor-type nil) t) that's right

[O] Bad interaction between flyspell and org-mode with latest Emacs

2012-04-26 Thread Vladimir Lomov
Hello, #+TITLE: Example with org-mode and flyspell on. #+AUTHOR: Vladimir Lomov * Org-mode src blocks and flyspell I faced with strange problem with Emacs and org-mode. In my real example I use src blocks and run =C-c '= to edit them in native mode (shell). If I enter into native mode, put

Re: [O] [beamer] When are :BEAMER_envargs: used or ignored?

2012-04-26 Thread James Harkins
At Thu, 26 Apr 2012 17:44:56 +0930, Eric Fraga wrote: But I still have the issue with it that the user has to adapt the org-file structure to suit beamer's requirements. Org-mode is all about reflecting the content in a way that makes sense FIRST to humans, and only secondarily to

Re: [O] orgstuct++ does not lurk silently in the shadow

2012-04-26 Thread Bastien
Hi Eric, Eric Fraga e.fr...@ucl.ac.uk writes: Thanks for this. This behaviour has annoyed me for years now. Me too... I've never gotten around to figuring out why I got this behaviour because I get caught up with writing the email and forget by the time I finish... I hope somebody can

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Sebastien Vauban
Hi Achim, Achim Gratz wrote: Since my Makefile branch was merged I've been getting flak for breaking certain setups. Now, the change didn't actually break them, but I did make (perhaps foolishly) a deliberate decision to make that particular breakage fatal rather than silent. It would be

Re: [O] [beamer] When are :BEAMER_envargs: used or ignored?

2012-04-26 Thread Sebastien Vauban
Hi James, James Harkins wrote: At Thu, 26 Apr 2012 17:44:56 +0930, Eric Fraga wrote: But I still have the issue with it that the user has to adapt the org-file structure to suit beamer's requirements. Org-mode is all about reflecting the content in a way that makes sense FIRST to

Re: [O] org-mode and google calendar

2012-04-26 Thread Olaf.Hamann
https://github.com/kiwanami/emacs-calfw Thank you for this hint. org-mode was mentioned in a german linux magazine article with topic calfw - should help to popularize org-mode. http://www.linux-magazin.de/NEWS/Emacs-Calfw-1.0-zeigt-Google-und-Org-Kalender

Re: [O] Disable links in Latex export

2012-04-26 Thread John Hendy
On Thu, Apr 26, 2012 at 3:51 AM, Eric Fraga e.fr...@ucl.ac.uk wrote: Nick Dokos nicholas.do...@hp.com writes: [...] If all you care about is the *appearance*, rather than the existence of links, however, you can use hyperref package options to influence that. For example    

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Detlef Steuer
Since my Makefile branch was merged I've been getting flak for breaking certain setups. Now, the change didn't actually break them, but I did make (perhaps foolishly) a deliberate decision to make that particular breakage fatal rather than silent. It would be very easy to continue to

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Martyn Jago
Hi Achim Achim Gratz strom...@nexgo.de writes: Since my Makefile branch was merged I've been getting flak for breaking certain setups. Now, the change didn't actually break them, but I did make (perhaps foolishly) a deliberate decision to make that particular breakage fatal rather than

Re: [O] Org tasks from gnus

2012-04-26 Thread Eric Fraga
Rémi Vanicat vani...@debian.org writes: Kyle Sexton k...@mocker.org writes: Does anyone know a way to automatically create/link org-tasks from Gnus messages? My current workflow is to just start a new capture and type in or paste some of the relevant info, but if org could link to the

[O] [bug] new exporter fails on read only files

2012-04-26 Thread Eric Fraga
Hello all, From one of the recent threads (on producing latex files for ACM publications), I was finally motivated to try the new export engine. I have run into a small problem: org-export-dispatch fails if the file is read only. I often have read only files as I use RCS as my version control

Re: [O] [bug] new exporter fails on read only files

2012-04-26 Thread Bastien
Hi Eric, Eric Fraga e.fr...@ucl.ac.uk writes: Specifically, I have added (require 'org-export) (require 'org-e-latex) to my org customisation. Then, while visiting a read only file, I try M-x org-export-dispatch RET p Mhh.. I can't reproduce this error with latest Org. and I

Re: [O] bug#11249: 24.1.50; Overlay with face property causes calendar buffer to scroll

2012-04-26 Thread Toby Cubitt
On Thu, Apr 26, 2012 at 10:59:50AM +0200, Bastien wrote: Hi Matt, Matt Lundin m...@imapmail.org writes: Note: It seems that adding the optional argument KEEPDATE is necessary for parsing to work. With the following line instead of the one above org-read-date works as expected:

Re: [O] bug#11249: 24.1.50; Overlay with face property causes calendar buffer to scroll

2012-04-26 Thread Bastien
Toby Cubitt ts...@cantab.net writes: On Thu, Apr 26, 2012 at 10:59:50AM +0200, Bastien wrote: Hi Matt, Matt Lundin m...@imapmail.org writes: Note: It seems that adding the optional argument KEEPDATE is necessary for parsing to work. With the following line instead of the one above

Re: [O] Dimming ancestors in the agenda (relevant to indenting nested TODOs in agenda views)

2012-04-26 Thread Bastien
Hi Eric, Eric Abrahamsen e...@ericabrahamsen.net writes: if I revisited nested todos, I would just write it on top of org-element, rather than the existing org-agenda code. Eventually! Great. Let's keep the future open then :) -- Bastien

[O] mail integration, advice?

2012-04-26 Thread Matt Price
I'd like to take one more shot at returning to text-based email within emacs, mostly because I want to be able to integrate mail easily into my org-mode workflow. The last time I tried this I used wanderlust, and I'd be willing to give it a try again but a couple of things have discouraged me in

Re: [O] Small grammar tweaks in export sections of org.texi

2012-04-26 Thread Bastien
Hi Brian, Brian van den Broek brian.van.den.br...@gmail.com writes: a) the limit is cumulative over all patches, It makes sense. b) trivial changes like replacing many instances of a name do not count, but multiple such sorts of changes can and c) the standard they presently endorse is 15

Re: [O] Fast linking to files in private git repos through a hyperlink

2012-04-26 Thread Bastien
Hi Dov, Dov Grobgeld dov.grobg...@gmail.com writes: Thanks for the link. I wasn't aware of that package. I see that I have a conflict in syntax as I used double colon for indicating the git repo while org-git-link.el used double colon for search pattern. The double colon is standard in Org

Re: [O] Ever used org-mode contrib packages?

2012-04-26 Thread Anthony Lander
On 12-Apr-11, at 3:22 PM, François Allisson wrote: I'm curious to know what you are using from org-contrib... I use org-babel, org-drill, and org-mac-link-grabber extensively. -Anthony

Re: [O] mail integration, advice?

2012-04-26 Thread Carson Chittom
Matt Price mopto...@gmail.com writes: I'd like to take one more shot at returning to text-based email within emacs, mostly because I want to be able to integrate mail easily into my org-mode workflow. The last time I tried this I used wanderlust, and I'd be willing to give it a try again but

Re: [O] [PATCH] Support hour in repeated task cookie

2012-04-26 Thread Takafumi Arakaki
Hi, Bastien Thanks for the patch and I am sorry for this late reply (especially because I pushed maintainers to review my patch before...). Anyway, I tried the head of master (580add2f4148fea949a4db5550577911ee6d756e) and it works fine for me. But I couldn't reproduce this behavior: Note that

[O] Bug: org-latex-to-pdf-process with bibtex fails to produce bibtex (workaround included) [7.8.03]

2012-04-26 Thread Arne Babenhauserheide
Remember to cover the basics, that is, what you expected to happen and what in fact did happen. You don't know how to make a good report? See http://orgmode.org/manual/Feedback.html#Feedback Your bug report will be posted to the Org-mode mailing list.

Re: [O] [babel] hide inline source code blocks by results

2012-04-26 Thread Eric Schulte
Eric Fraga e.fr...@ucl.ac.uk writes: Eric Schulte eric.schu...@gmx.com writes: Currently inline blocks like don't associate themselves with their results, they are only expected to be evaluated on export, so the functionality you suggest below would require first changing how results are

Re: [O] mail integration, advice?

2012-04-26 Thread Tassilo Horn
Carson Chittom car...@wistly.net writes: - fast search and easy-to-manage virtual folders of some kind -- I see mu and notmuch are very strong on both these fronts I'm looking to set up mairix, which Gnus supports, but I haven't yet. Mairix itself though just needs mail in Maildir or mbox

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Achim Gratz
Sebastien Vauban writes: Here, I would have thought that invoking the function `text-aux' would open the production Lisp file (that is, the one in Emacs code base) as you use Emacs loaddefs.el associations, no? It could be set up that way, but isn't. You wouldn't be able to move an installed

Re: [O] mail integration, advice?

2012-04-26 Thread Carson Chittom
Tassilo Horn tass...@member.fsf.org writes: If you talk to an IMAP or Gmane nntp server (remote or a local dovecot), you can simply hit `G G' on a group to search it without having to configure anything (in recent Gnus versions). Almost all IMAP servers index at least to/from/subject for

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Achim Gratz
Martyn Jago writes: As an aside, I haven't used MS windows for some two years (using OS X and Linux), but this will change shortly as my next project will require a working Windows system with MSys. I could certainly document the setup of Org-mode including functioning tests etc. on a

Re: [O] mail integration, advice?

2012-04-26 Thread Rasmus
Matt Price mopto...@gmail.com writes: I'd like to take one more shot at returning to text-based email within emacs, mostly because I want to be able to integrate mail easily into my org-mode workflow. It's worth it. The last time I tried this I used wanderlust, and I'd be willing to

[O] thanks

2012-04-26 Thread Domenico Orlando
Hi guys,    I just wanted to thank you all for the great work!I'm a theoretical physicist and I regularly use org-mode for almost every aspect of my research.All the best,Domenico Orlando-- Domenico Orlando, CERN Fellow Theory division phone: +41 22 767 29 59

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Bastien
Hi all, thanks Achim for this lengthy post, it's definitely worth reading for anyone who got confused by autoloading stuff once in his life (I did, who didn't?) Now, I should have warned the mailing list about possible breakage in people's configuration, I apologize for this. There is a fix

Re: [O] error on opening org-file with #+startup: indent

2012-04-26 Thread fkunze
Bastien bzg at gnu.org writes: fkunze fkunze at gmail.com writes: Augment the installation description (http://orgmode.org/manual/Installation.html#Installation) with a short description for windows users (that avoids the use of make). I'm not using Windows myself, but I would

Re: [O] mail integration, advice?

2012-04-26 Thread Tassilo Horn
Rasmus ras...@gmx.us writes: (if possible, this should allow me to archive a message and still be able to find it when I follow an org message link) You can capture gnus mails through org-capture. I don't know how robust the links are. The links are saved by combining the group and

Re: [O] Fast linking to files in private git repos through a hyperlink

2012-04-26 Thread Dov Grobgeld
Thanks for your suggestion Bastien, but unfortunately it does not directly map to the shortcut that I implemented in my package. In my *old* syntax: git:repo::file.txt file.txt is a search pattern for a *file* with in the symbolic repo repo which maps to a real repo through the hash variable

Re: [O] Fast linking to files in private git repos through a hyperlink

2012-04-26 Thread Samuel Wales
I imagine git allows a lot of opportunities for more features that we would want in such a link. Perhaps a more general, flexible, lispy keyword-style syntax would be useful here? Or handle with different link types and shunt off to a git call? -- The Kafka Pandemic:

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Achim Gratz
Bastien writes: There is a fix that makes the new Makefile compatible with everyone's configuration *without* requiring to add the version number directly in the org.el file. I'm discussing it with Achim and will commit it as soon as possible. Towards that end, I can test Emacs23 and Emacs24

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Sebastien Vauban
Hi Achim, Achim Gratz wrote: Sebastien Vauban writes: Here, I would have thought that invoking the function `text-aux' would open the production Lisp file (that is, the one in Emacs code base) as you use Emacs loaddefs.el associations, no? It could be set up that way, but isn't. You

Re: [O] Ever used org-mode contrib packages?

2012-04-26 Thread Peter Münster
On Wed, Apr 11 2012, François Allisson wrote: I'm curious to know what you are using from org-contrib... - org-notify -- Peter

Re: [O] mail integration, advice?

2012-04-26 Thread Florian Friesdorf
On Thu, 26 Apr 2012 09:47:40 -0400, Matt Price mopto...@gmail.com wrote: I'd like to take one more shot at returning to text-based email within emacs, mostly because I want to be able to integrate mail easily into my org-mode workflow. The last time I tried this I used wanderlust, and I'd be

[O] do sh source blocks ignore args? [7.8.09]

2012-04-26 Thread Neil Best
Can sh source block take arguments? I get nothing. #+NAME: test(foo=bar) #+BEGIN_SRC sh :session :results output verbatim replace echo 1. foo is $foo echo 2. foo is ${foo} #+END_SRC #+RESULTS: : 1. foo is : 2. foo is . . . but this is fine: #+NAME: test2 #+BEGIN_SRC sh :var foo=bar

Re: [O] do sh source blocks ignore args? [7.8.09]

2012-04-26 Thread Eric Schulte
Neil Best nb...@ci.uchicago.edu writes: Can sh source block take arguments? I get nothing. #+NAME: test(foo=bar) #+BEGIN_SRC sh :session :results output verbatim replace echo 1. foo is $foo echo 2. foo is ${foo} #+END_SRC #+RESULTS: : 1. foo is : 2. foo is . . . but this is

Re: [O] do sh source blocks ignore args? [7.8.09]

2012-04-26 Thread Neil Best
Org-mode version 7.8.09 How could this be? I ran it in a separate, minimally configured Emacs and got the good behavior, so org-version must be lying somehow or else not all of the functions were redefined when I upgraded. I thought a reload uncompiled would take care of this. I'll restart

Re: [O] mail integration, advice?

2012-04-26 Thread Myles English
Matt, On Thu, 26 Apr 2012 09:47:40 -0400, Matt Price said: So, I'm wondering what solutions other org users have settled on. I use gnus, offline imap, dovecot, notmuch, msmtp, bbdb3. And org-mode capture including links to emails works fine. The end result is very good and stable through

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Bastien
Achim Gratz strom...@nexgo.de writes: Bastien writes: There is a fix that makes the new Makefile compatible with everyone's configuration *without* requiring to add the version number directly in the org.el file. I'm discussing it with Achim and will commit it as soon as possible. Towards

[O] filetags - at certain level

2012-04-26 Thread Richard Riley
Would it be an easy enhancement to specify the level to apply certain filetags from the top org file meta data e.g #+FILETAGS: :crypt#2:private: In other words the more explicit equivalent would be something like * Banking ** Deutsche Bank Credit Card:crypt:visa: ** Maldives Platinum Card

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Bastien
Hi Sébastien, Sebastien Vauban wxhgmqzgwmuf-genee64ty+gs+fvcfc7...@public.gmane.org writes: You think that everything related to the Test package would have been loaded correctly. Not the case, obviously... More precisely: it has been _loaded_ correctly (i.e. it is in the load path), but the

Re: [O] mail integration, advice?

2012-04-26 Thread Charles Philip Chan
Matt Price mopto...@gmail.com writes: - wl causes emacs to freeze up when it checks or sends mail, and can take quite a long while to complete these operations I offload this by using external programs. My email flow consists of: 1. Fetch my mail from various sources with fetchmail. Usenet

Re: [O] missing autoloads / (void-variable org-version)

2012-04-26 Thread Bastien
Hi Sébastien, Sebastien Vauban wxhgmqzgwmuf-genee64ty+gs+fvcfc7...@public.gmane.org writes: You think that everything related to the Test package would have been loaded correctly. Not the case, obviously... More precisely: it has been _loaded_ correctly (i.e. it is in the load path), but

Re: [O] HTML export fails with (void-variable org-version)

2012-04-26 Thread Bernt Hansen
Achim Gratz strom...@nexgo.de writes: Bernt Hansen writes: I tried that... and installed emacs under Cygwin (so it can find emacs to run emacs -batch) and then had to fix permissions on org-install (since it's on a windows drive) before make autoloads worked. It's preferrable to use NTEmacs

[O] *Natural* language highlighting

2012-04-26 Thread Alex Lane
I've been using both Cyrillic and Latin characters (utf-8) in org mode and while I see quite a bit of discussion (in the archives and elsewhere) of various highlighting schemes for programming language syntax, has anyone ever heard of a way of color-coding different character sets (such as

[O] Org referring to Gnus mail

2012-04-26 Thread François Pinard
Hello. In my Org files, I have many references to Gnus articles which are part of mailgroups. When batch reading email with Gnus, I'm OK with the newsreader paradigm, in which an article is almost deleted as soon as it gets read: it will not show the next time I'll visit the group. However,

Re: [O] defining a clocktable in a capture template with absolute timespan computed relative to today

2012-04-26 Thread Ippei FURUHASHI
Hi Brian, Brian van den Broek brian.van.den.br...@gmail.com writes: how to add 1 day to the return value of (current-time). This hard coding is out of org-mode range, #+BEGIN_SRC elisp (format-time-string %Y-%m-%d (time-add (current-time) (seconds-to-time (* 24 60 60 #+END_SRC #+RESULTS:

Re: [O] mail integration, advice?

2012-04-26 Thread Eric Abrahamsen
On Thu, Apr 26 2012, Matt Price wrote: I'd like to take one more shot at returning to text-based email within emacs, mostly because I want to be able to integrate mail easily into my org-mode workflow. The last time I tried this I used wanderlust, and I'd be willing to give it a try again

Re: [O] Org referring to Gnus mail

2012-04-26 Thread William Gardella
François Pinard pin...@iro.umontreal.ca writes: Hello. In my Org files, I have many references to Gnus articles which are part of mailgroups. When batch reading email with Gnus, I'm OK with the newsreader paradigm, in which an article is almost deleted as soon as it gets read: it will not

Re: [O] HTML export fails with (void-variable org-version)

2012-04-26 Thread Achim Gratz
Bernt Hansen writes: Thanks for the detailed explanation Achim. I hope my problem report on this issue wasn't taken as a complaint - it wasn't intended that way -- Don't worry, problem reports are appreciated (even in the form of comaplints, which yours weren't). As I said before, I do want

Re: [O] *Natural* language highlighting

2012-04-26 Thread Nick Dokos
Alex Lane alex...@imap.cc wrote: ... On a (somewhat) related note, might someone point me at the face description(s) used for orgmode definition lists (e.g., foo :: bar)? I would specifically like to make the 'foo' part of such a definition a bit more assertive. Unfortunately, that's not