[Fink-users] SuiteSparse.patch
Alex, I just noticed my unstable version of suitesparse.patch is actually a copy of suitesparse.info. I tried verifying the problem isn't local to my machine, but the package database is apparently down. Can you/someone confirm that suitesparse.patch in the database is correct? Ben - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
Re: [Fink-users] SuiteSparse.patch
On Nov 23, 2007, at 7:01 PM, Martin Costabel wrote: Alex, I just noticed my unstable version of suitesparse.patch is actually a copy of suitesparse.info. I tried verifying the problem isn't local to my machine, but the package database is apparently down. Can you/someone confirm that suitesparse.patch in the database is correct? It isn't. It seems that the same file got committed both as info and as patch. On the tracker there are two versions of suitesparse.patch. They differ ony by one line: -+CFLAGS = -O3 -fno-common -fstrict-aliasing -fexceptions ++CFLAGS = -O3 -fno-common -no-cpp-precomp -fexceptions I suppose the one with -fstrict-aliasing is the right one? Yes, that is my understanding. Ben - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
Re: [Fink-users] SuiteSparse.patch
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Ben Abbott wrote: On Nov 23, 2007, at 7:01 PM, Martin Costabel wrote: Alex, I just noticed my unstable version of suitesparse.patch is actually a copy of suitesparse.info. I tried verifying the problem isn't local to my machine, but the package database is apparently down. Can you/someone confirm that suitesparse.patch in the database is correct? It isn't. It seems that the same file got committed both as info and as patch. On the tracker there are two versions of suitesparse.patch. They differ ony by one line: -+CFLAGS = -O3 -fno-common -fstrict-aliasing -fexceptions ++CFLAGS = -O3 -fno-common -no-cpp-precomp -fexceptions I suppose the one with -fstrict-aliasing is the right one? Yes, that is my understanding. Ben OK, I've committed the actual patch from the tracker. -BEGIN PGP SIGNATURE- Version: GnuPG v1.4.6 (GNU/Linux) Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org iD8DBQFHR3IIB8UpO3rKjQ8RAnQoAJ9xwYFgJnOMw0tihIbT4trYJoQBTwCgnrTz 177/Q7cfhQBsdRQKK9NLnNQ= =XG12 -END PGP SIGNATURE- - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
[Fink-users] X 10.5 fink unable to install xml-sax-pm588-0.15-2
Martin Costabel wrote: Sean Lake wrote: [] End of config.log follows: configure:6072: checking for GLIB - version = 1.2.6 configure:6171: gcc -o conftest.dSYM -g -O2 -I/sw/include/glib-1.2 -I/sw/lib/glib/include -D_REENTRANT -I/sw/include conftest.c -L/sw/lib -lgmodule -lgthread -lglib -lpthread -L/sw/lib 15 error: Not a directory - unable to create 'conftest.dSYM/Contents' bundle directory. The cause is one of the gifts that came with Leopard and that force us to patch the build system of very many packages individually. It is fixed now. A new selfupdate should bring you a version of gnome-vfs-ssl that builds on Leopard. Worked like a charm, thank you. Gnucash compiled, installed, and launched. Unfortuneately, I had already upgraded to Gnucash 2 so Gnucash 1 couldn't read the files, sigh. So, without further ado, I move on to the problem I'm having with installing Gnucash 2. I removed my fink and bootstrapped from scratch again and this sudo fink install gnucash2 results in: Reading buildlock packages... /sw/bin/dpkg-lockwait -i /sw/fink/dists/unstable/main/binary-darwin-i386/libs/perlmods/xml-sax-pm588_0.15-2_darwin-i386.deb (Reading database ... 35342 files and directories currently installed.) Preparing to replace xml-sax-pm588 0.15-2 (using .../xml-sax-pm588_0.15-2_darwin-i386.deb) ... Creating config files in /sw/etc/perl5/5.8.8/XML/SAX... Removing obsolete directory /sw/etc/xml... Unpacking replacement xml-sax-pm588 ... Setting up xml-sax-pm588 (0.15-2) ... update-perl588-sax-parsers: adding Perl SAX parser module info file of XML::SAX::PurePerl... Can't locate object method save_parsers_debian via package XML::SAX at /sw/sbin/update-perl588-sax-parsers line 97. /sw/bin/dpkg: error processing xml-sax-pm588 (--install): subprocess post-installation script returned error exit status 22 Errors were encountered while processing: xml-sax-pm588 ### execution of /sw/bin/dpkg-lockwait failed, exit code 1 Any help, fixes, or requests for more info appreciated. Thanks, Sean P.S. Since this is technically a new thread, I again provide the vital statistics for my system: OS X 10.5.1, 2 GHz Intel Core 2 Duo iMac, 2 GB RAM fink --version Package manager version: 0.27.9 Distribution version: 0.8.1.rsync i386 XCode 3 and Apple X11 installed. - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
Re: [Fink-users] SuiteSparse.patch
Alex, I just noticed my unstable version of suitesparse.patch is actually a copy of suitesparse.info. I tried verifying the problem isn't local to my machine, but the package database is apparently down. Can you/someone confirm that suitesparse.patch in the database is correct? It isn't. It seems that the same file got committed both as info and as patch. On the tracker there are two versions of suitesparse.patch. They differ ony by one line: -+CFLAGS = -O3 -fno-common -fstrict-aliasing -fexceptions ++CFLAGS = -O3 -fno-common -no-cpp-precomp -fexceptions I suppose the one with -fstrict-aliasing is the right one? -- Martin - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
Re: [Fink-users] X 10.5 gnome-vfs-ssl Fails During Compile Check
Sean Lake wrote: [] End of config.log follows: configure:6072: checking for GLIB - version = 1.2.6 configure:6171: gcc -o conftest.dSYM -g -O2 -I/sw/include/glib-1.2 -I/sw/lib/glib/include -D_REENTRANT -I/sw/include conftest.c -L/sw/lib -lgmodule -lgthread -lglib -lpthread -L/sw/lib 15 error: Not a directory - unable to create 'conftest.dSYM/Contents' bundle directory. The cause is one of the gifts that came with Leopard and that force us to patch the build system of very many packages individually. It is fixed now. A new selfupdate should bring you a version of gnome-vfs-ssl that builds on Leopard. -- Martin - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
Re: [Fink-users] X 10.5 fink unable to install xml-sax-pm588-0.15-2
Sean, * Sean Lake [EMAIL PROTECTED] [2007-Nov-23 20:51 AKST]: update-perl588-sax-parsers: adding Perl SAX parser module info file of XML::SAX::PurePerl... Can't locate object method save_parsers_debian via package XML::SAX at /sw/sbin/update-perl588-sax-parsers line 97. I had the same problem earlier today. I believe the problem is that Perl is using the module that now comes with Leopard, which doesn't have the save_parsers_debian method in it. My quick and dirty fix was to just move the Leopard modules out of the way temporarily so Perl would use the fink ones. It's not much of a fix, but here's what I did: $ sudo mv /System/Libraries/Perl/Extras/5.8.8/ /tmp/ do whatever installations are necessary $ sudo mv /tmp/5.8.8/ /System/Library/Perl/Extras/ Maybe there's a Perl module PATH that could solve it more gracefully? Cheers, Chris -- Christopher S. Swingley [EMAIL PROTECTED] Intl. Arctic Research Center University of Alaska Fairbanks http://people.iarc.uaf.edu/~cswingle/ - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
[Fink-users] arb fails to build; undefined symbols
Trying to build arb (phylogeny package) on 10.4.11 with gcc-4.0.1, intel macbook. It fails with the following end output. Any ideas why? Thanks, Mike D-S Target 'bin/arb_edit4' not found - rebuilding bin/arb_edit4 (Thu Jan 1 09:59:59 1970) Link bin/arb_edit4 g++ -DDARWIN -DNO_REGEXPR -no-cpp-precomp -DHAVE_BOOL -L/sw2/lib -Wl,- stack_size -Wl,1000 -Wl,-stack_addr -Wl,c000 -lGLU -lGL -lGLw -lglut -lglui -dylib_file /System/Library/Frameworks/OpenGL.framework/ Versions/A/Libraries/libGL.dylib:/System/Library/Frameworks/ OpenGL.framework/Versions/A/Libraries/libGL.dylib -o bin/arb_edit4 -L/ sw2/src/fink.build/arb-2007-1003/./LIBLINK -L/sw2/lib RNA3D/RNA3D.a NAMES_COM/client.a AWTC/AWTC.a EDIT4/EDIT4.a SECEDIT/SECEDIT.a SERVERCNTRL/SERVERCNTRL.a STAT/STAT.a ARB_GDE/ARB_GDE.a ISLAND_HOPPING/ISLAND_HOPPING.a SL/HELIX/HELIX.a SL/AW_HELIX/ AW_HELIX.a SL/AW_NAME/AW_NAME.a SL/FILE_BUFFER/FILE_BUFFER.a XML/ XML.a -lARBDB -lstdc++ -lAW -lAWT -L/usr/X11R6/lib -L/sw2/lib -lXm - lXt -lX11 -lXext -lXp -lc /usr/libexec/gcc/i686-apple-darwin8/4.0.1/ld: Undefined symbols: ___GLEW_ARB_point_sprite ___GLEW_EXT_point_parameters ___GLEW_VERSION_1_2 ___glewPointParameterfEXT ___glewPointParameterfvEXT _glewGetErrorString _glewGetString _glewInit _pngBind collect2: ld returned 1 exit status make: *** [bin/arb_edit4] Error 1 ### execution of /var/tmp/tmp.2.v6tUjI failed, exit code 2 - This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2005. http://clk.atdmt.com/MRT/go/vse012070mrt/direct/01/ ___ Fink-users mailing list Fink-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/fink-users
