Re: [Freesurfer] PetSurfer questions

2020-02-09 Thread Soo-Jong Kim
External Email - Use Caution Thank you, Dr. Greve I checked all about your comment. I have questions more. 1. I found that volumes or counts in gtm.stats.dat are for native PET space. If co-registered PET onto corresponding MRI(i.e. MRI space) is available using rbv.nii.gz from

Re: [Freesurfer] PetSurfer questions

2020-02-09 Thread Soo-Jong Kim
External Email - Use Caution Thank you, Dr. Greve I checked all about your comment. I have questions more. 1. I found that volumes or counts in gtm.stats.dat are for native PET space. If co-registered PET onto corresponding MRI(i.e. MRI space) is available using rbv.nii.gz from

Re: [Freesurfer] Using Buckner Cerebellar Parcellation

2020-02-09 Thread Thomas Yeo
External Email - Use Caution Hi Davide, Here's a previous email I sent to the list about warping Choi's striatum atlas to individual subject's striatum (which I have modified for the cerebellum). Let us know if this works. 1) Assuming you are quite happy with the freesurfer

Re: [Freesurfer] Using Buckner Cerebellar Parcellation

2020-02-09 Thread Davide Momi
External Email - Use Caution Dear Thomas, yes I am trying to warp the Buckner Parcellation to anatomical of all my subjects Please find below the command that I used: mri_vol2vol --mov ../Buckner2011_7Networks_MNI152_FreeSurferConformed1mm_LooseMask.nii.gz \