Hi Xiaofu - Right now your only option is to have a different
configuration file for each set of subjects that was scanned with a
different protocol.
Best,
a.y
On Fri, 12 Jun 2015, Xiaofu wrote:
Hi Anastasia, Yes. I tried to run bedpostx on a stand-alone computer but it
is very slow
Yes. I did it. Thank you very much.
Best,
Xiaofu
On Tue, Jun 16, 2015 at 2:34 PM, Anastasia Yendiki
ayend...@nmr.mgh.harvard.edu wrote:
Hi Xiaofu - Right now your only option is to have a different
configuration file for each set of subjects that was scanned with a
different protocol.
Hi Anastasia,
Yes. I tried to run bedpostx on a stand-alone computer but it is very
slow although it can work well.
Regarding the b-values, we do have some subjects which were scanned in
different protocols a few years ago. If it is possible, please add the
option to the new version of
Dear Anastasia,
Thanks for your answer. I tried to replace 'bedpostx_mgh' with 'bedpostx'
in the shell file 'tract-all' in order to run Tracula in the C2B2 server
(Titan cluster). But it failed as well. Is there anyway to run Tracula,
i.e., by pass the running error of bedpostx_mgh?
Besides,
Hi Xiaofu - The bedpostx program is not configured to run on any type of
cluster with any type of queueing software. It was originally written to
be run on an SGE cluster with specific queue names. The bedpostx_mgh is a
modified version that also works on our PBS cluster. Making it work on
Dear Sir/Madam,
I tried to run Tracula in the C2B2 server at Columbia University.
However, I got the following error message after submitted my job using
qsub to the sever. I'd greatly appreciate it if you could help me resolve
this problem.
*WARN: Running FSL's bedbost locally - this might
