Re: [Freesurfer] Mac OSX installations incomplete? What to do?

2014-04-10 Thread Markus Gschwind
Thank you Zeke, that seems to work all fine! Best, Markus 2014-04-08 21:17 GMT+02:00 Z K zkauf...@nmr.mgh.harvard.edu: Markus, Thanks for pointing that out. I have added those files to the ftp link. -Zeke On 04/04/2014 04:16 PM, Markus Gschwind wrote: Thank you Zeke, What about

Re: [Freesurfer] Mac OSX installations incomplete? What to do?

2014-04-08 Thread Z K
Markus, Thanks for pointing that out. I have added those files to the ftp link. -Zeke On 04/04/2014 04:16 PM, Markus Gschwind wrote: Thank you Zeke, What about these? /usr/local/freesurfer/bin/bet.fsl /usr/local/freesurfer/bin/flirt.fsl /usr/local/freesurfer/bin/slicetimer.fsl They are

[Freesurfer] Mac OSX installations incomplete? What to do?

2014-04-04 Thread Markus Gschwind
Dear Freesurfers, As discovered here, http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg35160.html it seams that some Mac OSX installations suffered from incomplete files. I just veryfied that I had downloaded the complete image and wget says yes: Logging in as anonymous ...

Re: [Freesurfer] Mac OSX installations incomplete? What to do?

2014-04-04 Thread Z K
There are 3 missing fsl files from the OSX snow leopard installation. They can be downloaded from here: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/zkaufman/fsl Copy them into your $FREESURFER_HOME/bin directory. -Zeke On 04/04/2014 12:32 PM, Markus Gschwind wrote: Dear

Re: [Freesurfer] Mac OSX installations incomplete? What to do?

2014-04-04 Thread Markus Gschwind
Thank you Zeke, What about these? /usr/local/freesurfer/bin/bet.fsl /usr/local/freesurfer/bin/flirt.fsl /usr/local/freesurfer/bin/slicetimer.fsl They are not there neither compared to the ubuntu install. Best, Markus 2014-04-04 19:05 GMT+02:00 Z K zkauf...@nmr.mgh.harvard.edu: There are