Paula, what is the processor type and speed? how much memory do you have on your system?
Nick On Mon, 2013-02-25 at 11:50 +0100, Vieweg, Paula /DZNE wrote: > Hi, > > > I have installed Freesurfer (Leopard version) on Mac Mountain Lion and > tried to use it for a full segmentation (recon-all -all). > On my own files I get a problem with Talairach, the program aborts and > I get the recommendation to try it with -notal–check. > I have done this and Freesurfer has since then taken 6 days to run one > brain. I have started the example script with Bert and it has run 4 > days. I have aborted all the processes now and am asking for help. > All other steps in the Testing protocol with Bert seem to work apart > from the recon-all -all. > I am using 7T data (but with just 1mm isotropic resolution), which is > where I thought the problem came from. > Since the example script also does not run (that is, does not finish), > it seems to be a problem with the installation and possibly my Mac > version. > Do you have any suggestion how to solve this? > > > Best, > Paula > > > Paula Vieweg > Aging & Cognition Research Group > German Center for Neurodegenerative Diseases (DZNE) > Building 15, Room 309a > Leipziger Str. 44 > 39120 Magdeburg > GERMANY > > > phone: +49-391-67-24520 > email: paula.vie...@dzne.de > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
