Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-21 Thread amirhossein manzouri
Thanks Doug, I used the first link and works perfectly now! Best regards, Amirhossein Manzouri On Tue, May 20, 2014 at 5:03 PM, Douglas N Greve gr...@nmr.mgh.harvard.eduwrote: I just ran it, and it works fine. It may be that I need to give you more libraries. Start with this one

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-20 Thread amirhossein manzouri
Dear Doug, Kindly find attached a sample of my lh.aparc.stats file! Best regards, Amirhossein Manzouri On Mon, May 19, 2014 at 7:59 PM, Douglas N Greve gr...@nmr.mgh.harvard.eduwrote: Can you send me your lh.aparc.stats file? doug On 05/14/2014 01:41 PM, amirhossein manzouri wrote:

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-19 Thread Douglas N Greve
Can you send me your lh.aparc.stats file? doug On 05/14/2014 01:41 PM, amirhossein manzouri wrote: Yes! On May 14, 2014 7:16 PM, Douglas N Greve gr...@nmr.mgh.harvard.edu mailto:gr...@nmr.mgh.harvard.edu wrote: Is the mean thickness in the ?h.aparc.stats file? Something like #

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-14 Thread Douglas N Greve
Is the mean thickness in the ?h.aparc.stats file? Something like # Measure Cortex, MeanThickness, Mean Thickness, 2.27227, mm On 05/13/2014 05:18 PM, amirhossein manzouri wrote: Hi, The same result! the last is insula ! Best regards, Amirhossein Manzouri On Mon, May 12, 2014 at 5:05

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-14 Thread amirhossein manzouri
Yes! On May 14, 2014 7:16 PM, Douglas N Greve gr...@nmr.mgh.harvard.edu wrote: Is the mean thickness in the ?h.aparc.stats file? Something like # Measure Cortex, MeanThickness, Mean Thickness, 2.27227, mm On 05/13/2014 05:18 PM, amirhossein manzouri wrote: Hi, The same result! the last

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-13 Thread amirhossein manzouri
Hi, The same result! the last is insula ! Best regards, Amirhossein Manzouri On Mon, May 12, 2014 at 5:05 PM, Douglas N Greve gr...@nmr.mgh.harvard.eduwrote: Try this version ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/ greve/aparcstats2table On 05/12/2014 03:41 AM,

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-12 Thread amirhossein manzouri
Hi again, I think I missed my question, How can I get the Mean Thickness of each hemisphere for several subjects using the aparcstats2table command? On Fri, May 9, 2014 at 4:28 PM, amirhossein manzouri a.h.manzo...@gmail.com wrote: Dear Doug, I have read this post(

Re: [Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-12 Thread Douglas N Greve
Try this version ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/aparcstats2table On 05/12/2014 03:41 AM, amirhossein manzouri wrote: Hi again, I think I missed my question, How can I get the Mean Thickness of each hemisphere for several subjects using the aparcstats2table

[Freesurfer] Mean Thickness for each hemisphere from ?.aparc.stats

2014-05-09 Thread amirhossein manzouri
Dear Doug, I have read this post( https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg25218.html) regarding extracting Mean Cth of each hemisphere and I just get insula as the last and totally 34 numbers, I use aparcstats2table --hemi lh --subjects bert -m thickness --tablefile