When you look at the vertex in matlab, are you correctly accounting for
the fact that FreeView uses 0-based indexing and matlab uses 1-based?
Eg, vertex 234741 in Freeview would be 234742 in matlab. You seem to be
using 234740 in matlab below
On 10/15/2018 05:11 PM, Bruss, Joel E wrote:
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External Email - Use Caution
I'm trying to make a surface file from a subject's head and to map coordinates
to that surface. If I run:
mri_seghead --invol $SUBJECTS_DIR/$sub/mri/T1.mgz --outvol
$SUBJECTS_DIR/$sub/mri/seghead.mgz --fill 255 --thresh1 20 --thresh2 20
