Any help and direction you can provide with this error would be appreciated. The full log is attached. I was running with -openmp 5 on a machine with 6 cores and 8 Mbytes of RAM.
0033: dt=73.984000, rms=0.641 (0.133%), neg=0, invalid=96777 0034: dt=73.984000, rms=0.640 (0.104%), neg=0, invalid=96777 0035: dt=73.984000, rms=0.640 (0.095%), neg=0, invalid=96777 0036: dt=517.888000, rms=0.639 (0.162%), neg=0, invalid=96777 0037: dt=23.120000, rms=0.639 (-0.002%), neg=0, invalid=96777 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.639, neg=0, invalid=96777 0038: dt=92.480000, rms=0.638 (0.081%), neg=0, invalid=96777 Segmentation fault (core dumped) ERROR: mri_ca_register with non-zero status 139 but continuing despite the error #-------------------------------------- #@# CA Reg Inv Tue Feb 10 19:24:19 EST 2015 /home/kriegerd/Contrib/freesurfer/subjects/175/mri mri_ca_register -invert-and-save transforms/talairach.m3z Loading, Inverting, Saving, Exiting ... Reading transforms/talairach.m3z ERROR: cannot find or read transforms/talairach.m3z ERROR: mri_ca_register with non-zero status 0 Linux OfficeFedora21 3.17.4-301.fc21.x86_64 #1 SMP Thu Nov 27 19:09:10 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux recon-all -s 175 exited with ERRORS at Tue Feb 10 19:24:19 EST 2015 Regards, Don [Signature0001] Don Krieger, Ph.D. Department of Neurological Surgery University of Pittsburgh
175_recon-all.log
Description: 175_recon-all.log
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
