Hi Paul,
you will need aseg and maybe more in the -long runs anyway. But if you really
want to stop after norm
… -autorecon1 -gcareg -canorm
passing autorecon2 will do the whole block :
https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllTableStableV6.0
External Email - Use Caution
Hello FreeSurfer team,
In order to create the longitudinal base after norm.mgz, Is the command
below the right way to end recon-all after creating norm.mgz?
recon-all -s subjectID -autorecon1 -autorecon2 -i T1image -canorm.
Thank you.
Best,
Paul
