Re: [Freesurfer] FreeSurfer ROI masks for DTI tractograpy

2010-11-11 Thread Matt Glasser
Of Douglas N Greve Sent: Wednesday, November 10, 2010 4:26 PM To: Jason Tourville Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] FreeSurfer ROI masks for DTI tractograpy I've done a little of this kind of thing, mostly tracking from thalamus or amygdala to cortex, not starting at cortex

Re: [Freesurfer] FreeSurfer ROI masks for DTI tractograpy

2010-11-10 Thread Douglas N Greve
I've done a little of this kind of thing, mostly tracking from thalamus or amygdala to cortex, not starting at cortex, but the problem would be the same. I have not had the problem that you describe, even when starting at voxels clearly interior to thalamus (none of which is actually labeled